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S. Rhie · SciRah

Researcher profile · Semantic Scholar

S. Rhie

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S. Rhie — researcher profile on SciRah

h-index: 33
Works: 101
Citations: 9,386

Most-cited papers

The molecular taxonomy of primary prostate cancer
A. Abeshouse, Jaeil Ahn, R. Akbani, A. Ally +308 more
2015Cell2,825 citations Open access
Semantic Scholar
Comprehensive molecular portraits of invasive lobular breast cancer
G. Ciriello, M. Gatza, Andrew H. Beck, M. Wilkerson +137 more
2015Cell1,737 citations Open access
Semantic Scholar
Comprehensive functional genomic resource and integrative model for the human brain
Daifeng Wang, Shuang Liu, J. Warrell, H. Won +36 more
2018Science967 citations Open access
Semantic Scholar
Integrative Genomic Analysis of Cholangiocarcinoma Identifies Distinct IDH-Mutant Molecular Profiles
F. Farshidfar, Si-Yuan Zheng, M. Gingras, Yulia Newton +39 more
2017Cell Reports504 citations Open access
Semantic Scholar
Genome-wide association studies identify four ER negative–specific breast cancer risk loci
M. García-Closas, F. Couch, S. Lindstrom, K. Michailidou +266 more
2013Nature Genetics442 citations Open access
Semantic Scholar
A Meta-Analysis Identifies New Loci Associated with Body Mass index in Individuals of African Ancestry
K. Monda, Gary K. Chen, Kira C. Taylor, C. Palmer +204 more
2013Nature Genetics260 citations Open access
Semantic Scholar
Comparison of Breast Cancer Molecular Features and Survival by African and European Ancestry in The Cancer Genome Atlas
D. Huo, Hai Hu, S. Rhie, E. Gamazon +16 more
2017JAMA Oncology250 citations Open access
Semantic Scholar
A meta-analysis of genome-wide association studies of breast cancer identifies two novel susceptibility loci at 6q14 and 20q11.
A. Siddiq, F. Couch, Gary K. Chen, S. Lindström +136 more
2012Human Molecular Genetics190 citations Open access
Semantic Scholar
Comprehensive Functional Annotation of 77 Prostate Cancer Risk Loci
Dennis J. Hazelett, S. Rhie, Malaina Gaddis, Chun-Li Yan +12 more
2014PLoS Genetics188 citations Open access
Semantic Scholar
Ezh2-dCas9 and KRAB-dCas9 enable engineering of epigenetic memory in a context-dependent manner
H. O'Geen, Sofie L Bates, S. Carter, Karly A Nisson +5 more
2019Epigenetics & Chromatin151 citations Open access
Semantic Scholar
Integrative Genomic Analysis of Cholangiocarcinoma Identifies Distinct IDH-Mutant Molecular Profiles
V. Cardinale, E. Gaudio, D. Alvaro, A. Franchitto +196 more
2017Cell Reports146 citations Open access
Semantic Scholar
A high-resolution 3D epigenomic map reveals insights into the creation of the prostate cancer transcriptome
S. Rhie, Andrew A. Perez, Fides D. Lay, S. Schreiner +3 more
2019Nature Communications114 citations Open access
Semantic Scholar
FunciSNP: an R/bioconductor tool integrating functional non-coding data sets with genetic association studies to identify candidate regulatory SNPs
Simon G. Coetzee, S. Rhie, Benjamin P. Berman, G. Coetzee +1 more
2012Nucleic Acids Research99 citations Open access
Semantic Scholar
CT-based radiomics stratification of tumor grade and TNM stage of clear cell renal cell carcinoma
Natalie L. Demirjian, B. Varghese, S. Cen, D. Hwang +13 more
2021European Radiology95 citations
Semantic Scholar
Neuronal and glial 3D chromatin architecture informs the cellular etiology of brain disorders
Benxia Hu, H. Won, Won Mah, Royce B. Park +152 more
2021Nature Communications91 citations Open access
Semantic Scholar
A genome-wide association study of breast cancer in women of African ancestry
Fang Chen, Gary K. Chen, D. Stram, R. Millikan +49 more
2012Human Genetics81 citations Open access
Semantic Scholar
ZFX acts as a transcriptional activator in multiple types of human tumors by binding downstream from transcription start sites at the majority of CpG island promoters
S. Rhie, L. Yao, Zhi-Fei Luo, Heather Witt +4 more
2018Genome Research73 citations Open access
Semantic Scholar
CRISPR-mediated deletion of prostate cancer risk-associated CTCF loop anchors identifies repressive chromatin loops
Yu Guo, Andrew A. Perez, Dennis J. Hazelett, G. Coetzee +2 more
2018Genome Biology70 citations Open access
Semantic Scholar
The Enigmatic HOX Genes: Can We Crack Their Code?
Zhi-Fei Luo, S. Rhie, P. Farnham
2019Cancers63 citations Open access
Semantic Scholar
Parallel PRC2/cPRC1 and vPRC1 pathways silence lineage-specific genes and maintain self-renewal in mouse embryonic stem cells
J. A. Zepeda-Martínez, C. Pribitzer, J. Wang, D. Bsteh +9 more
2020Science Advances60 citations Open access
Semantic Scholar
A prostate cancer risk element functions as a repressive loop that regulates HOXA13
Zhi-Fei Luo, S. Rhie, Fides D. Lay, P. Farnham
2017Cell Reports58 citations Open access
Semantic Scholar
Identification of activated enhancers and linked transcription factors in breast, prostate, and kidney tumors by tracing enhancer networks using epigenetic traits
S. Rhie, Yu Guo, Yu Gyoung Tak, Li-Jing Yao +4 more
2016Epigenetics & Chromatin58 citations Open access
Semantic Scholar
Using 3D epigenomic maps of primary olfactory neuronal cells from living individuals to understand gene regulation
S. Rhie, S. Schreiner, Heather Witt, Chris Armoskus +8 more
2018Science Advances50 citations Open access
Semantic Scholar
Evidence of Novel Susceptibility Variants for Prostate Cancer and a Multiancestry Polygenic Risk Score Associated with Aggressive Disease in Men of African Ancestry
Fei Chen, R. Madduri, Alex A. Rodriguez, B. Darst +114 more
2023European Urology49 citations Open access
Semantic Scholar
Revealing the brain's molecular architecture.
A. Ashley-Koch, Gregory E. Crawford, M. Garrett, Ling-Yun Song +149 more
2018Science48 citations Open access
Semantic Scholar
Cell-type-specific enrichment of risk-associated regulatory elements at ovarian cancer susceptibility loci.
Simon G. Coetzee, Howard C. Shen, Dennis J. Hazelett, K. Lawrenson +17 more
2015Human Molecular Genetics48 citations Open access
Semantic Scholar
Comprehensive Functional Annotation of Seventy-One Breast Cancer Risk Loci
S. Rhie, Simon G. Coetzee, H. Noushmehr, Chun-Li Yan +3 more
2013PLoS ONE48 citations Open access
Semantic Scholar
Genetic discovery and risk characterization in type 2 diabetes across diverse populations
L. Polfus, B. Darst, H. Highland, Xin Sheng +50 more
2021HGG advances42 citations Open access
Semantic Scholar
A comprehensive examination of breast cancer risk loci in African American women.
Ye Feng, D. Stram, S. Rhie, R. Millikan +29 more
2014Human Molecular Genetics38 citations Open access
Semantic Scholar
The prostate cancer risk variant rs55958994 regulates multiple gene expression through extreme long-range chromatin interaction to control tumor progression
Yu-Yang Qian, Lei Zhang, Mingyang Cai, Hong-Xia Li +7 more
2019Science Advances36 citations Open access
Semantic Scholar
Discovery and fine-mapping of height loci via high-density imputation of GWASs in individuals of African ancestry.
M. Graff, A. Justice, Kristin L. Young, E. Marouli +221 more
2021American Journal of Human Genetics33 citations Open access
Semantic Scholar
Cell-free DNA Methylation as a Predictive Biomarker of Response to Neoadjuvant Chemotherapy for Patients with Muscle-invasive Bladder Cancer in SWOG S1314
Yi-Tsung Lu, M. Plets, G. Morrison, Alexander T. Cunha +12 more
2023European Urology Oncology30 citations Open access
Semantic Scholar
Phosphorylation and stabilization of EZH2 by DCAF1/VprBP trigger aberrant gene silencing in colon cancer
N. Ghate, Sungmin Kim, Yonghwan Shin, Jinman Kim +9 more
2023Nature Communications28 citations Open access
Semantic Scholar
VprBP directs epigenetic gene silencing through histone H2A phosphorylation in colon cancer
N. Ghate, Sangnam Kim, E. Spiller, Sungmin Kim +6 more
2021Molecular Oncology27 citations Open access
Semantic Scholar
Characterizing chromatin interactions of regulatory elements and nucleosome positions, using Hi-C, Micro-C, and promoter capture Micro-C
Beoung Hun Lee, Zexun Wu, S. Rhie
2022Epigenetics & Chromatin23 citations Open access
Semantic Scholar
MMP-9 drives the melanomagenic transcription program through histone H3 tail proteolysis
Yonghwan Shin, Sungmin Kim, N. Ghate, S. Rhie +1 more
2021Oncogene23 citations
Semantic Scholar
TENET 2.0: Identification of key transcriptional regulators and enhancers in lung adenocarcinoma
Daniel J. Mullen, Chun-Li Yan, Diane S. Kang, Bei-Yun Zhou +5 more
2020PLoS Genetics23 citations Open access
Semantic Scholar
Characterizing Genetic Susceptibility to Breast Cancer in Women of African Ancestry
Ye Feng, S. Rhie, D. Huo, Edward A. Ruiz-Narváez +41 more
2017Cancer Epidemiology, Biomarkers and Prevention23 citations Open access
Semantic Scholar
Genomic, epigenomic, and transcriptomic signatures of prostate cancer between African American and European American patients
C. Stevens, Alexandria J. Hightower, S. Buxbaum, S. Falzarano +1 more
2023Frontiers in Oncology21 citations Open access
Semantic Scholar
Positional integration of lung adenocarcinoma susceptibility loci with primary human alveolar epithelial cell epigenomes.
Chen-Chen Yang, T. Stueve, Chun-Li Yan, S. Rhie +6 more
2018Epigenomics18 citations Open access
Semantic Scholar
m6A epitranscriptome analysis reveals differentially methylated transcripts that drive early chemoresistance in bladder cancer
Emmanuelle Hodara, Aubree Mades, Lisa Swartz, Maheen Iqbal +5 more
2023NAR Cancer16 citations Open access
Semantic Scholar
Defining Regulatory Elements in the Human Genome Using Nucleosome Occupancy and Methylome Sequencing (NOMe-seq)
S. Rhie, S. Schreiner, P. Farnham
2018Methods in molecular biology16 citations Open access
Semantic Scholar
FOXC1 Binds Enhancers and Promotes Cisplatin Resistance in Bladder Cancer
Yi-Tsung Lu, Tong Xu, Maheen Iqbal, T. Hsieh +5 more
2022Cancers14 citations Open access
Semantic Scholar
Molecular and computational approaches to map regulatory elements in 3D chromatin structure
Beoung Hun Lee, S. Rhie
2021Epigenetics & Chromatin14 citations Open access
Semantic Scholar
Epigenetic plasticity potentiates a rapid cyclical shift to and from an aggressive cancer phenotype
Tong Xu, Hong-Tao Li, Jenny J. Wei, Meng Li +11 more
2020International Journal of Cancer14 citations Open access
Semantic Scholar
Characterizing and Targeting Genes Regulated by Transcription Factor MYBL2 in Lung Adenocarcinoma Cells
Yuri Lee, Zexun Wu, Seolyn Yang, Shannon M Schreiner +2 more
2022Cancers13 citations Open access
Semantic Scholar
Feasibility of using CT radiomic signatures for predicting CD8-T cell infiltration and PD-L1 expression in renal cell carcinoma
B. Varghese, S. Cen, H. Zahoor, I. Siddiqui +12 more
2022European Journal of Radiology Open13 citations Open access
Semantic Scholar
Role of KCNAB2 expression in modulating hormone secretion in somatotroph pituitary adenoma.
C. Ashton, S. Rhie, J. Carmichael, G. Zada
2020Journal of Neurosurgery12 citations
Semantic Scholar
Radiogenomic Associations Clear Cell Renal Cell Carcinoma: An Exploratory Study
Derek Liu, Komal Dani, S. Reddy, X. Lei +13 more
2023Oncology11 citations Open access
Semantic Scholar
Epigenetic dysregulation in meningiomas
M. Wedemeyer, I. Muskens, B. Strickland, Oscar N. Aurelio +7 more
2022Neuro-Oncology Advances8 citations Open access
Semantic Scholar

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