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Shannon M. Soucy · SciRah

Researcher profile · Semantic Scholar

Shannon M. Soucy

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Shannon M. Soucy — researcher profile on SciRah

h-index: 14
Works: 37
Citations: 1,796

Most-cited papers

Horizontal gene transfer: building the web of life
Shannon M. Soucy, Jin-Ling Huang, J. Gogarten
2015Nature reviews genetics1,291 citations
Semantic Scholar
The pan-genome as a shared genomic resource: mutual cheating, cooperation and the black queen hypothesis
Matthew S. Fullmer, Shannon M. Soucy, J. Gogarten
2015Frontiers in Microbiology61 citations Open access
Semantic Scholar
Insights into origin and evolution of α-proteobacterial gene transfer agents
M. Shakya, Shannon M. Soucy, O. Zhaxybayeva
2017bioRxiv52 citations Open access
Semantic Scholar
Population and genomic analysis of the genus Halorubrum
Matthew S. Fullmer, Shannon M. Soucy, K. Swithers, A. Makkay +4 more
2014Frontiers in Microbiology51 citations Open access
Semantic Scholar
Bacterial Diversification in the Light of the Interactions with Phages: The Genetic Symbionts and Their Role in Ecological Speciation
L. Braga, Shannon M. Soucy, D. Amgarten, A. D. da Silva +1 more
2018Frontiers in Ecology and Evolution44 citations Open access
Semantic Scholar
Impact of a homing intein on recombination frequency and organismal fitness
A. Naor, Neta Altman-Price, Shannon M. Soucy, Anna G. Green +5 more
2016Proceedings of the National Academy of Sciences of the United States of America39 citations Open access
Semantic Scholar
Pervasive acquisition of CRISPR memory driven by inter-species mating of archaea can limit gene transfer and influence speciation
Israela Turgeman-Grott, S. Joseph, S. Marton, Kim Eizenshtein +9 more
2018Nature Microbiology32 citations Open access
Semantic Scholar
Evolution of Bacterial Gene Transfer Agents
R. Redfield, Shannon M. Soucy
2018bioRxiv28 citations Open access
Semantic Scholar
Oxidative Phosphorylation is a Metabolic Vulnerability of Endocrine Therapy-Tolerant Persister Cells in ER+ Breast Cancer
Steven Tau, Mary D. Chamberlin, Hui-Juan Yang, Jonathan D Marotti +13 more
2025Cancer Research27 citations
Semantic Scholar
Inteins as indicators of gene flow in the halobacteria
Shannon M. Soucy, Matthew S. Fullmer, R. Papke, J. Gogarten
2014Frontiers in Microbiology27 citations Open access
Semantic Scholar
The Role of Reticulate Evolution in Creating Innovation and Complexity
K. Swithers, Shannon M. Soucy, J. Gogarten
2012International Journal of Evolutionary Biology27 citations Open access
Semantic Scholar
Comparative Analysis of Surface Layer Glycoproteins and Genes Involved in Protein Glycosylation in the Genus Haloferax
Yarden Shalev, Shannon M. Soucy, R. Papke, J. Gogarten +2 more
2018Genes21 citations Open access
Semantic Scholar
Natural Antibodies alert the Adaptive Immune System of the Presence of Transformed cells in Early Tumorigenesis
K. Rawat, Shannon M. Soucy, F. Kolling, Kiara Díaz +3 more
2022Journal of Immunology17 citations Open access
Semantic Scholar
Distribution and evolution of the mobile vma-1b intein.
K. Swithers, Shannon M. Soucy, E. Lasek-Nesselquist, P. Lapierre +1 more
2013Molecular biology and evolution17 citations Open access
Semantic Scholar
Estrogen therapy induces receptor-dependent DNA damage enhanced by PARP inhibition in ER+ breast cancer
Nicole A. Traphagen, G. Schwartz, Steven Tau, A. Jiang +12 more
2023bioRxiv13 citations Open access
Semantic Scholar
Quantifying Forms and Functions of Enterohepatic Bile Acid Pools in Mice
Koichi Sudo, Amber Delmas-Eliason, Shannon M. Soucy, Kaitlyn E Barrack +13 more
2024Cellular and Molecular Gastroenterology and Hepatology12 citations Open access
Semantic Scholar
Estrogen therapy induces receptor-dependent DNA damage enhanced by PARP inhibition in ER+ breast cancer
Nicole A. Traphagen, G. Schwartz, Steven Tau, Alyssa M Roberts +13 more
2023Clinical Cancer Research10 citations Open access
Semantic Scholar
Orthologues, Paralogues and Horizontal Gene Transfer in the Human Holobiont
Shannon M. Soucy, L. Olendzenski, J. Gogarten
20137 citations
Semantic Scholar
Drug delivery dynamics dictate evolution of bacterial antibiotic responses
John C Crow, Hao Geng, C. Geiger, Timothy J Sullivan +2 more
2025The ISME Journal6 citations Open access
Semantic Scholar
Alternating 17β-Estradiol and Aromatase Inhibitor Therapies Is Efficacious in Postmenopausal Women with Advanced Endocrine-Resistant ER+ Breast Cancer
G. Schwartz, P. Kaufman, K. Giridhar, J. Marotti +8 more
2023Clinical Cancer Research5 citations Open access
Semantic Scholar
Profiling bile acids in the stools of humans and animal models of cystic fibrosis
Melissa M. Carmichael, R. Valls, Shannon M. Soucy, J. Sanville +4 more
2025Microbiology spectrum3 citations Open access
Semantic Scholar
A genotoxin associated with colorectal cancer linked to gut dysbiosis in children with cystic fibrosis
Kaitlyn E Barrack, Sarvesh V. Surve, Ana V. de Sousa Bezerra, Caitlin E. Murphy +8 more
2025bioRxiv2 citations Open access
Semantic Scholar
Endocrine persistence in ER+ breast cancer is accompanied by metabolic vulnerability in oxidative phosphorylation
Steven Tau, Mary D. Chamberlin, Hui-Juan Yang, Jonathan D Marotti +12 more
2024bioRxiv2 citations
Semantic Scholar
An Efficient, Nonphylogenetic Method for Detecting Genes Sharing Evolutionary Signals in Phylogenomic Data Sets
L. T. Rangel, Shannon M. Soucy, J. Setubal, J. Gogarten +1 more
2021Genome Biology and Evolution2 citations Open access
Semantic Scholar
Non-phylogenetic identification of co-evolving genes for reconstructing the archaeal Tree of Life
L. T. Rangel, Shannon M. Soucy, J. Setubal, J. Gogarten +1 more
2020bioRxiv2 citations Open access
Semantic Scholar
Profiling Bile Acids in the Stools of Humans and Animal Models of Cystic Fibrosis
Melissa M. Carmichael, R. Valls, Shannon M. Soucy, J. Sanville +4 more
2025bioRxiv1 citations Open access
Semantic Scholar
Optimizing Protocols for MicroRNA Profiling of Infant and Toddler Stool
David A. Armstrong, Shannon M. Soucy, Meghan E. Muse, F. Kolling +9 more
2025bioRxiv1 citations Open access
Semantic Scholar
Inteins as Indicators of Bio-Communication
Shannon M. Soucy, J. Gogarten
20171 citations
Semantic Scholar
Optimizing protocols for microRNA profiling of infant and toddler stool
David A. Armstrong, Shannon M. Soucy, Meghan E. Muse, F. Kolling +9 more
2026RNA Biology0 citations Open access
Semantic Scholar
Ileitis abolishes tolerogenic functions of the enterohepatic bile acid pool
Zhi-Ping Xiao, Koichi Sudo, Amber Delmas-Eliason, Jia-Bao Liu +23 more
2026bioRxiv0 citations Open access
Semantic Scholar
A genotoxin associated with colorectal cancer linked to gut dysbiosis in children with cystic fibrosis
Kaitlyn E Barrack, Sarvesh V. Surve, Ana V. de Sousa Bezerra, Caitlin E. Murphy +8 more
2026Journal of Bacteriology0 citations Open access
Semantic Scholar
Abstract PO4-23-08: Estrogen therapy induces receptor-dependent DNA damage enhanced by PARP inhibition in ER+ breast cancer
Nicole A. Traphagen, Gary Schwartz, Steven Tau, Alyssa M Roberts +13 more
2024Cancer Research0 citations
Semantic Scholar
Cloud-based introduction to BASH programming for biologists
Owen M. Wilkins, Ross Campbell, Zelaikha Yosufzai, Valena Doe +1 more
2024Briefings Bioinform.0 citations Open access
Semantic Scholar
Quantifying forms and functions of intestinal bile acid pools in mice
Koichi Sudo, Amber Delmas-Eliason, Shannon M. Soucy, Kaitlyn E Barrack +13 more
2024bioRxiv0 citations Open access
Semantic Scholar
Dynamics of drug delivery determines course of evolution of antibiotic responses in bacteria
John C Crow, Hao Geng, Timothy J Sullivan, Shannon M. Soucy +1 more
2023bioRxiv0 citations Open access
Semantic Scholar
Non-phylogenetic identification of co-evolving genes for reconstructing the archaeal Tree of Life 3
L. T. Rangel, Shannon M. Soucy, J. Setubal, J. Gogarten +2 more
20210 citations
Semantic Scholar
Intein Epidemiology: A Study of the Lifestyle, Distribution, Phylogenetics, and Dynamics of Inteins
Shannon M. Soucy
20160 citations
Semantic Scholar

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