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P. Cubry · SciRah

Researcher profile · Semantic Scholar

P. Cubry

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P. Cubry — researcher profile on SciRah

h-index: 21
Works: 64
Citations: 2,176

Most-cited papers

Pearl millet genome sequence provides a resource to improve agronomic traits in arid environments
R. Varshney, Chengcheng Shi, M. Thudi, C. Mariac +61 more
2017Nature Biotechnology434 citations Open access
Semantic Scholar
Resequencing of 429 chickpea accessions from 45 countries provides insights into genome diversity, domestication and agronomic traits
R. Varshney, M. Thudi, Manish Roorkiwal, Weiming He +36 more
2019Nature Genetics261 citations Open access
Semantic Scholar
A chickpea genetic variation map based on the sequencing of 3,366 genomes
R. Varshney, Manish Roorkiwal, Shuai Sun, Prasad Bajaj +53 more
2021Nature193 citations Open access
Semantic Scholar
The Rise and Fall of African Rice Cultivation Revealed by Analysis of 246 New Genomes.
P. Cubry, C. Tranchant-Dubreuil, A. Thuillet, Cécile Monat +13 more
2018Current Biology103 citations Open access
Semantic Scholar
Pearl millet genomic vulnerability to climate change in West Africa highlights the need for regional collaboration
B. Rhoné, D. Defrance, C. Berthouly-Salazar, C. Mariac +8 more
2020Nature Communications100 citations Open access
Semantic Scholar
A western Sahara centre of domestication inferred from pearl millet genomes
C. Burgarella, P. Cubry, N. Kane, R. Varshney +14 more
2018Nature Ecology & Evolution99 citations Open access
Semantic Scholar
Fonio millet genome unlocks African orphan crop diversity for agriculture in a changing climate
M. Abrouk, H. Ahmed, P. Cubry, D. Šimoníková +24 more
2020Nature Communications98 citations Open access
Semantic Scholar
Yam genomics supports West Africa as a major cradle of crop domestication
N. Scarcelli, P. Cubry, R. Akakpo, A. Thuillet +13 more
2019Science Advances92 citations Open access
Semantic Scholar
Foundation characteristics of edible Musa triploids revealed from allelic distribution of SSR markers
I. Hippolyte, Christophe Jenny, L. Gardes, F. Bakry +10 more
2012Annals of Botany89 citations Open access
Semantic Scholar
Diversity in coffee assessed with SSR markers: structure of the genus Coffea and perspectives for breeding.
P. Cubry, P. Musoli, H. Legnaté, D. Pot +5 more
2008Genome88 citations
Semantic Scholar
Genetic differentiation of wild and cultivated populations: diversity of Coffea canephora Pierre in Uganda.
P. Musoli, P. Cubry, P. Aluka, C. Billot +6 more
2009Genome82 citations
Semantic Scholar
Global analysis of Coffea canephora Pierre ex Froehner (Rubiaceae) from the Guineo-Congolese region reveals impacts from climatic refuges and migration effects
P. Cubry, F. De Bellis, D. Pot, P. Musoli +1 more
2013Genetic Resources and Crop Evolution57 citations
Semantic Scholar
A Quantitative Theory for Genomic Offset Statistics
Clément Gain, B. Rhoné, P. Cubry, Israfel Salazar +4 more
2023bioRxiv55 citations Open access
Semantic Scholar
Improving the quality of African robustas: QTLs for yield- and quality-related traits in Coffea canephora
T. Leroy, F. De Bellis, H. Legnaté, E. Kananura +9 more
2011Tree Genetics & Genomes48 citations Open access
Semantic Scholar
Developing core collections to optimize the management and the exploitation of diversity of the coffee Coffea canephora
T. Leroy, F. De Bellis, H. Legnaté, P. Musoli +3 more
2014Genetica40 citations
Semantic Scholar
Development and characterization of a new set of 164 polymorphic EST‐SSR markers for diversity and breeding studies in rubber tree (Hevea brasiliensis Müll. Arg.)
P. Cubry, V. Pujade-Renaud, Dominique Garcia, S. Espéout +3 more
201429 citations Open access
Semantic Scholar
QTL detection for growth and latex production in a full-sib rubber tree population cultivated under suboptimal climate conditions
J. R. B. F. Rosa, C. Mantello, Dominique Garcia, L. M. de Souza +8 more
2018BMC Plant Biology26 citations Open access
Semantic Scholar
An initial assessment of linkage disequilibrium (LD) in coffee trees: LD patterns in groups of Coffea canephora Pierre using microsatellite analysis
P. Cubry, F. De Bellis, Komlan Avia, S. Bouchet +4 more
2013BMC Genomics26 citations Open access
Semantic Scholar
Phylogeography and population genetics of black alder (Alnus glutinosa (L.) Gaertn.) in Ireland: putting it in a European context
P. Cubry, E. Gallagher, E. O'Connor, C. Kelleher
2015Tree Genetics & Genomes24 citations
Semantic Scholar
Common microgeographical selection patterns revealed in four European conifers
I. Scotti, H. Lalagüe, S. Oddou-Muratorio, C. Scotti-Saintagne +13 more
2022Molecular Ecology21 citations Open access
Semantic Scholar
Genome Wide Association Study Pinpoints Key Agronomic QTLs in African Rice Oryza glaberrima
P. Cubry, Hélène Pidon, K. Ta, C. Tranchant-Dubreuil +11 more
2020Rice21 citations Open access
Semantic Scholar
The Empirical Distribution of Singletons for Geographic Samples of DNA Sequences
P. Cubry, Y. Vigouroux, O. François
2017Frontiers in Genetics20 citations Open access
Semantic Scholar
Adaptive potential of Coffea canephora from Uganda in response to climate change
S. O. de Aquino, C. Kiwuka, R. Tournebize, Clément Gain +16 more
2022Molecular Ecology19 citations Open access
Semantic Scholar
Genetic control of rhizosheath formation in pearl millet
C. de la Fuente Cantó, Marcel Nahim Diouf, P. M. S. Ndour, M. Debieu +15 more
2021Scientific Reports17 citations Open access
Semantic Scholar
New insights on spatial genetic structure and diversity of Coffea canephora (Rubiaceae) in Upper Guinea based on old herbaria
J. Labouisse, P. Cubry, F. Austerlitz, R. Rivallan +1 more
2020Plant Ecology and Evolution14 citations Open access
Semantic Scholar
Impact of past climatic and recent anthropogenic factors on wild yam genetic diversity
H. Chaïr, P. du Roy, P. Cubry, B. Sinsin +1 more
2011Molecular Ecology14 citations
Semantic Scholar
Genome-Wide Admixture Mapping Identifies Wild Ancestry-of-Origin Segments in Cultivated Robusta Coffee
Tram Vi, Y. Vigouroux, P. Cubry, P. Marraccini +4 more
2023Genome Biology and Evolution11 citations Open access
Semantic Scholar
Erratum: Visualizing detailed postdoctoral employment trends using a new career outcome taxonomy
R. Varshney, Chengcheng Shi, M. Thudi, Cédric Mariac +61 more
2018Nature Biotechnology11 citations Open access
Semantic Scholar
Genetic diversity and population structure in Vitis species illustrate phylogeographic patterns in eastern North America
J. Péros, P. Cousins, Amandine Launay, P. Cubry +9 more
2021Molecular Ecology9 citations
Semantic Scholar
Generalization of the QST framework in hierarchically structured populations: Impacts of inbreeding and dominance
P. Cubry, I. Scotti, S. Oddou-Muratorio, F. Lefèvre
2017Molecular Ecology Resources9 citations Open access
Semantic Scholar
Physiological and genetic control of transpiration efficiency in African rice, Oryza glaberrima Steud.
P. Affortit, B. Effa-Effa, M. S. Ndoye, Daniel Moukouanga +14 more
2022Journal of Experimental Botany8 citations
Semantic Scholar
Assessment of Genetic Diversity of Rice in Registered Cultivars and Farmers’ Fields in Burkina Faso
M. Barro, K. Konaté, I. Wonni, A. I. Kassankogno +9 more
2021Crops8 citations Open access
Semantic Scholar
Novel Post-Glacial Haplotype Evolution in Birch – A Case for Conserving Local Adaptation
S. Belton, P. Cubry, Erica L. Fox, C. Kelleher
2021Forests8 citations Open access
Semantic Scholar
Genomic evidence of genuine wild versus admixed olive populations evolving in the same natural environments in western Mediterranean Basin
L. Zunino, P. Cubry, G. Sarah, Pierre Mournet +4 more
2023bioRxiv7 citations Open access
Semantic Scholar
Interactions between microenvironment, selection and genetic architecture drive multiscale adaptation in a simulation experiment
P. Cubry, S. Oddou-Muratorio, I. Scotti, F. Lefèvre
2022Journal of Evolutionary Biology6 citations Open access
Semantic Scholar
Global analysis of Coffea canephora Pierre ex Froehner (Rubiaceae) from the Guineo-Congolese region reveals impacts from climatic refuges and migration effects
P. Cubry, F. De Bellis, D. Pot, P. Musoli +1 more
2012Genetic Resources and Crop Evolution6 citations
Semantic Scholar
Genome-wide association analysis identifies natural allelic variants associated with panicle architecture variation in African rice, Oryza glaberrima Steud
Fabrice Ntakirutimana, C. Tranchant-Dubreuil, P. Cubry, K. Chougule +5 more
2023G35 citations Open access
Semantic Scholar
Genomic footprints of selection in early-and late-flowering pearl millet landraces
A. Faye, A. Barnaud, N. Kane, P. Cubry +13 more
2022Frontiers in Plant Science5 citations Open access
Semantic Scholar
Out of Africa: The genomic footprints of Vietnamese Robusta coffee
Tram Vi, T. N. Le, P. Cubry, V. Phan +15 more
2025PLoS ONE4 citations Open access
Semantic Scholar
Impact of Seed Origin and Genetic Drift of Improved Rice Variety IR841 in Benin
P. Sédah, L. G. Djédatin, L. Loko, E. Ewedje +6 more
2023Rice4 citations Open access
Semantic Scholar
Linking Genomic Offset Statistics to the Shape of Selection Gradients.
Thibaut Capblancq, A. Tauzin, Yves Vigouroux, P. Cubry +1 more
2025American Naturalist3 citations
Semantic Scholar
Nucleotide diversity of genes involved in sucrose metabolism. Towards the identification of candidates genes controlling sucrose variability in Coffea sp.
D. Pot, S. Bouchet, P. Marraccini, F. De Bellis +8 more
20073 citations
Semantic Scholar
Population Genomics of Crop Domestication: Current State and Perspectives
P. Cubry, Y. Vigouroux
20182 citations
Semantic Scholar
Developing core collections to optimize the management and the exploitation of diversity of the coffee Coffea canephora
T. Leroy, F. De Bellis, H. Legnaté, P. Musoli +3 more
2014Genetica2 citations
Semantic Scholar
Whole-genome sequence of a female Loa loa adult worm from Cameroon
J. A. Rajaonarivelo, Cédric Mariac, P. Cubry, Francois Sabot +1 more
2026BMC Research Notes1 citations Open access
Semantic Scholar
Molecular characterisation of Pinus sylvestris (L.) in Ireland at the western limit of the species distribution
S. Belton, P. Cubry, Jenni R. Roche, C. Kelleher
2024BMC Ecology and Evolution1 citations Open access
Semantic Scholar
Author Correction: A chickpea genetic variation map based on the sequencing of 3,366 genomes
R. Varshney, Manish Roorkiwal, Shuai Sun, Prasad Bajaj +53 more
2022Nature1 citations Open access
Semantic Scholar
Fighting against coffee wilt disease: Uganda wild Coffea canephora genetic diversity and its usefulness.
C. P. Musoli, P. Aluka, P. Cubry, M. Dufour +8 more
20071 citations
Semantic Scholar
Genetic diversity, NIRS, fruit biochemical analyses and cup testing in cultivated Coffea canephora Pierre from different districts in Uganda
P. Aluka, C. P. Musoli, P. Cubry, F. Davrieux +8 more
20071 citations
Semantic Scholar
Population structure and genetic diversity of cowpea germplasm from Senegal within a global framework
A. Bodian, Awa Sarr, Sassoum Lo, O. Diack +8 more
2026Scientific Reports0 citations Open access
Semantic Scholar

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