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Brian Abernathy · SciRah

Researcher profile · Semantic Scholar

Brian Abernathy

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Brian Abernathy — researcher profile on SciRah

h-index: 24
Works: 35
Citations: 7,959

Most-cited papers

Genome sequence of the palaeopolyploid soybean
J. Schmutz, S. Cannon, J. Schlueter, Jian-Xin Ma +41 more
2010Nature4,188 citations Open access
Semantic Scholar
A reference genome for common bean and genome-wide analysis of dual domestications
J. Schmutz, P. McClean, S. Mamidi, G. A. Wu +37 more
2014Nature Genetics1,214 citations Open access
Semantic Scholar
The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut
D. Bertioli, S. Cannon, L. Froenicke, Guodong Huang +35 more
2016Nature Genetics836 citations Open access
Semantic Scholar
The genome sequence of segmental allotetraploid peanut Arachis hypogaea
D. Bertioli, J. Jenkins, J. Clevenger, Olga Dudchenko +46 more
2019Nature Genetics587 citations Open access
Semantic Scholar
Genome-wide SNP Genotyping Resolves Signatures of Selection and Tetrasomic Recombination in Peanut
J. Clevenger, Y. Chu, Carolina Chavarro, Gaurav Agarwal +15 more
2017Molecular Plant131 citations Open access
Semantic Scholar
A Comparative Epigenomic Analysis of Polyploidy-Derived Genes in Soybean and Common Bean1[OPEN]
Kyung Do Kim, Moaine El Baidouri, Brian Abernathy, Aiko Iwata-Otsubo +5 more
2015Plant Physiology102 citations Open access
Semantic Scholar
Improved drought tolerance in wheat plants overexpressing a synthetic bacterial cold shock protein gene SeCspA
Tai-Fei Yu, Zhao-Shi Xu, Jin-kao Guo, Yanxia Wang +7 more
2017Scientific Reports95 citations Open access
Semantic Scholar
Defining the Transcriptome Assembly and Its Use for Genome Dynamics and Transcriptome Profiling Studies in Pigeonpea (Cajanus cajan L.)
A. Dubey, A. Farmer, J. Schlueter, S. Cannon +15 more
2011DNA Research93 citations Open access
Semantic Scholar
Identification and characterization of functional centromeres of the common bean.
Aiko Iwata, Ahmet L. Tek, Manon M. S. Richard, Brian Abernathy +11 more
2013The Plant Journal66 citations
Semantic Scholar
Tetrasomic Recombination Is Surprisingly Frequent in Allotetraploid Arachis
S. Leal-Bertioli, K. Shirasawa, Brian Abernathy, M. Moretzsohn +5 more
2015Genetics58 citations Open access
Semantic Scholar
Landscape and evolutionary dynamics of terminal repeat retrotransposons in miniature in plant genomes
Dong-Ying Gao, Yupeng Li, Kyung Do Kim, Brian Abernathy +1 more
2016Genome Biology52 citations Open access
Semantic Scholar
Transcriptomic changes due to water deficit define a general soybean response and accession-specific pathways for drought avoidance
Jinhee Shin, Justin N. Vaughn, H. Abdel-Haleem, Carolina Chavarro +4 more
2015BMC Plant Biology50 citations Open access
Semantic Scholar
Horizontal Transfer of Non-LTR Retrotransposons from Arthropods to Flowering Plants
Dong-Ying Gao, Y. Chu, H. Xia, Chunming Xu +5 more
2017Molecular biology and evolution47 citations Open access
Semantic Scholar
Genome sequence of the palaeopolyploid soybean
J. Schmutz, S. Cannon, J. Schlueter, Jian-Xin Ma +41 more
2010Nature44 citations Open access
Semantic Scholar
Legacy genetics of Arachis cardenasii in the peanut crop shows the profound benefits of international seed exchange
D. Bertioli, J. Clevenger, I. Godoy, H. T. Stalker +24 more
2021Proceedings of the National Academy of Sciences of the United States of America43 citations Open access
Semantic Scholar
TILLING by sequencing to identify induced mutations in stress resistance genes of peanut (Arachis hypogaea)
Yufang Guo, Brian Abernathy, Ya-Juan Zeng, P. Ozias-Akins
2015BMC Genomics42 citations Open access
Semantic Scholar
Evaluating two different models of peanut’s origin
D. Bertioli, Brian Abernathy, G. Seijo, J. Clevenger +1 more
2020Nature Genetics39 citations Open access
Semantic Scholar
Segmental allopolyploidy in action: Increasing diversity through polyploid hybridization and homoeologous recombination.
S. Leal-Bertioli, I. Godoy, J. F. Santos, J. Doyle +5 more
2018American-Eurasian journal of botany39 citations Open access
Semantic Scholar
A new approach for annotation of transposable elements using small RNA mapping
Moaine El Baidouri, Kyung Do Kim, Brian Abernathy, S. Arikit +4 more
2015Nucleic Acids Research32 citations Open access
Semantic Scholar
Annotation and sequence diversity of transposable elements in common bean (Phaseolus vulgaris)
Dong-Ying Gao, Brian Abernathy, D. Rohksar, J. Schmutz +1 more
2014Frontiers in Plant Science32 citations Open access
Semantic Scholar
Fluorescence In Situ Hybridization (FISH)-Based Karyotyping Reveals Rapid Evolution of Centromeric and Subtelomeric Repeats in Common Bean (Phaseolus vulgaris) and Relatives
Aiko Iwata-Otsubo, Brittany Radke, S. Findley, Brian Abernathy +2 more
2016G3: Genes, Genomes, Genetics27 citations Open access
Semantic Scholar
Graph-based pangenomics maximizes genotyping density and reveals structural impacts on fungal resistance in melon
Justin N. Vaughn, S. Branham, Brian Abernathy, Amanda M. Hulse-Kemp +3 more
2022bioRxiv26 citations Open access
Semantic Scholar
Genome sequence of the palaeopolyploid
S. Cannon, J. Schlueter, Jian-Xin Ma, T. Mitros +34 more
201026 citations
Semantic Scholar
Distribution and analysis of SSR in mung bean (Vigna radiata L.) genome based on an SSR-enriched library
Li-Xia Wang, Moaine El Baidouri, Brian Abernathy, Hong-Lin Chen +4 more
2015Molecular breeding24 citations
Semantic Scholar
Genic C-Methylation in Soybean Is Associated with Gene Paralogs Relocated to Transposable Element-Rich Pericentromeres.
Moaine El Baidouri, Kyung Do Kim, Brian Abernathy, Ying-Hui Li +2 more
2018Molecular Plant21 citations Open access
Semantic Scholar
Dynamic Oryza Genomes: Repetitive DNA Sequences as Genome Modeling Agents
N. Gill, P. SanMiguel, B. Dhillon, Brian Abernathy +5 more
2010Rice19 citations Open access
Semantic Scholar
Integration of hybridization-based markers (overgos) into physical maps for comparative and evolutionary explorations in the genus Oryza and in Sorghum
Barbara L. Hass-Jacobus, Montona Futrell-Griggs, Brian Abernathy, R. Westerman +18 more
2006BMC Genomics17 citations Open access
Semantic Scholar
Integration of the Draft Sequence and Physical Map as a Framework for Genomic Research in Soybean (Glycine max (L.) Merr.) and Wild Soybean (Glycine soja Sieb. and Zucc.)
Jungmin Ha, Brian Abernathy, William M. Nelson, D. Grant +7 more
2012G3: Genes, Genomes, Genetics8 citations Open access
Semantic Scholar
TAR30, a homolog of the canonical plant TTTAGGG telomeric repeat, is enriched in the proximal chromosome regions of peanut (Arachis hypogaea L.)
Dong-Ying Gao, Eliza F. M. B. Nascimento, S. Leal-Bertioli, Brian Abernathy +3 more
2022Chromosome Research5 citations
Semantic Scholar
Dynamics of a Novel Highly Repetitive CACTA Family in Common Bean (Phaseolus vulgaris)
Dong-Ying Gao, Dongyan Zhao, Brian Abernathy, Aiko Iwata-Otsubo +3 more
2016G3: Genes, Genomes, Genetics5 citations Open access
Semantic Scholar
Landscape and evolutionary dynamics of terminal-repeat retrotransposons in miniature (TRIMs) in 48 whole plant genomes
Dong-Ying Gao, Yupeng Li, Brian Abernathy, S. Jackson
2014bioRxiv3 citations Open access
Semantic Scholar
Schmutz J, Cannon S, Schlueter J, Ma J, Mitros T, et al. (2010 ) Genome sequence of the palaeopolyploid soybean
J. Schmutz, S. Cannon, J. Schlueter, J. Ma +46 more
20101 citations
Semantic Scholar
Landscape and evolutionary dynamics of terminal repeat retrotransposons in miniature in plant genomes
Dong-Ying Gao, Yupeng Li, Kyung Do Kim, Brian Abernathy +1 more
2016Genome Biology0 citations Open access
Semantic Scholar
Present address different from heading : 36
Kyung Do Kim, Moaine El Baidouri, Brian Abernathy, Aiko Iwata-Otsubo +4 more
20150 citations
Semantic Scholar
Distribution and analysis of SSR in mung bean (Vigna radiata L.) genome based on an SSR-enriched library
Li-Xia Wang, Moaine El Baidouri, Brian Abernathy, Hong-Lin Chen +4 more
2015Molecular breeding0 citations
Semantic Scholar

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