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P. Permi · SciRah

Researcher profile · Semantic Scholar

P. Permi

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P. Permi — researcher profile on SciRah

h-index: 39
Works: 215
Citations: 5,048

Most-cited papers

Psychedelics promote plasticity by directly binding to BDNF receptor TrkB
Rafael Moliner, M. Girych, C. Brunello, V. Kovaleva +29 more
2023Nature Neuroscience441 citations Open access
Semantic Scholar
Arabidopsis RCD1 coordinates chloroplast and mitochondrial functions through interaction with ANAC transcription factors
A. Shapiguzov, J. Vainonen, Kerri Hunter, H. Tossavainen +22 more
2019eLife139 citations Open access
Semantic Scholar
Hassallidins, antifungal glycolipopeptides, are widespread among cyanobacteria and are the end-product of a nonribosomal pathway
Johanna Vestola, T. K. Shishido, J. Jokela, D. Fewer +6 more
2014Proceedings of the National Academy of Sciences of the United States of America114 citations Open access
Semantic Scholar
Antifungal Compounds from Cyanobacteria
T. K. Shishido, Anu Humisto, J. Jokela, Liwei Liu +7 more
2015Marine Drugs95 citations Open access
Semantic Scholar
Nostosins, Trypsin Inhibitors Isolated from the Terrestrial Cyanobacterium Nostoc sp. Strain FSN.
Liwei Liu, J. Jokela, M. Wahlsten, B. Nowruzi +5 more
2014Journal of Natural Products66 citations
Semantic Scholar
New Structural Variants of Aeruginosin Produced by the Toxic Bloom Forming Cyanobacterium Nodularia spumigena
D. Fewer, J. Jokela, Eeva Paukku, Julia Österholm +6 more
2013PLoS ONE65 citations Open access
Semantic Scholar
Role of two sequence motifs of mesencephalic astrocyte-derived neurotrophic factor in its survival-promoting activity
K. Mätlik, Li-Ying Yu, A. Eesmaa, M. Hellman +8 more
2015Cell Death and Disease64 citations Open access
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The cytoprotective protein MANF promotes neuronal survival independently from its role as a GRP78 cofactor
Ave Eesmaa, Li-Ying Yu, Helka Göös, Kristofer Nõges +8 more
2021Journal of Biological Chemistry52 citations Open access
Semantic Scholar
Production of High Amounts of Hepatotoxin Nodularin and New Protease Inhibitors Pseudospumigins by the Brazilian Benthic Nostoc sp. CENA543
J. Jokela, Lassi Matti Petteri Heinilä, T. K. Shishido, M. Wahlsten +6 more
2017Frontiers in Microbiology47 citations Open access
Semantic Scholar
Aerobic exercise training and gut microbiome-associated metabolic shifts in women with overweight: a multi-omic study
Jukka E. Hintikka, J. Ahtiainen, P. Permi, S. Jalkanen +2 more
2023Scientific Reports44 citations Open access
Semantic Scholar
Towards Controlled Synthesis of Water-Soluble Gold Nanoclusters: Synthesis and Analysis
Karolina Sokołowska, S. Malola, M. Lahtinen, Ville K. Saarnio +6 more
2019Journal of Physical Chemistry C44 citations Open access
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Dynamic Stabilization of the Ligand-Metal Interface in Atomically Precise Gold Nanoclusters Au68 and Au144 Protected by meta-Mercaptobenzoic Acid.
Tiia-Riikka Tero, S. Malola, B. Koncz, E. Pohjolainen +6 more
2017ACS Nano41 citations Open access
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Structural and Functional Insights Into Lysostaphin–Substrate Interaction
H. Tossavainen, Vytas Raulinaitis, L. Kauppinen, U. Pentikäinen +2 more
2018Frontiers in Molecular Biosciences39 citations Open access
Semantic Scholar
Structural Basis of the High Affinity Interaction between the Alphavirus Nonstructural Protein-3 (nsP3) and the SH3 Domain of Amphiphysin-2*
H. Tossavainen, O. Aitio, M. Hellman, K. Saksela +1 more
2016Journal of Biological Chemistry39 citations Open access
Semantic Scholar
Antifungal activity improved by coproduction of cyclodextrins and anabaenolysins in Cyanobacteria
T. K. Shishido, J. Jokela, C. Kolehmainen, D. Fewer +7 more
2015Proceedings of the National Academy of Sciences of the United States of America35 citations Open access
Semantic Scholar
Identification and structural characterization of LytU, a unique peptidoglycan endopeptidase from the lysostaphin family
Vytas Raulinaitis, H. Tossavainen, O. Aitio, J. T. Juuti +3 more
2017Scientific Reports34 citations Open access
Semantic Scholar
4-Methylproline guided natural product discovery: co-occurrence of 4-hydroxy- and 4-methylprolines in nostoweipeptins and nostopeptolides.
Liwei Liu, J. Jokela, L. Herfindal, M. Wahlsten +5 more
2014ACS Chemical Biology34 citations
Semantic Scholar
Characterization of the interaction of the antifungal and cytotoxic cyclic glycolipopeptide hassallidin with sterol-containing lipid membranes.
Anu Humisto, J. Jokela, K. Teigen, M. Wahlsten +3 more
2019Biochimica et Biophysica Acta - Biomembranes31 citations Open access
Semantic Scholar
Potent Inhibitor of Human Trypsins from the Aeruginosin Family of Natural Products
Muhammad N Ahmed, M. Wahlsten, J. Jokela, M. Nees +9 more
2021ACS Chemical Biology28 citations Open access
Semantic Scholar
Discovery of a Pederin Family Compound in a Nonsymbiotic Bloom-Forming Cyanobacterium.
A. Kust, J. Mareš, J. Jokela, Petra Urajová +9 more
2018ACS Chemical Biology28 citations Open access
Semantic Scholar
Hydrophobic pocket targeting probes for enteroviruses.
M. Martikainen, Kirsi Salorinne, T. Lahtinen, S. Malola +3 more
2015Nanoscale27 citations
Semantic Scholar
Alternative Biosynthetic Starter Units Enhance the Structural Diversity of Cyanobacterial Lipopeptides
J. Mareš, Jan Hájek, Petra Urajová, A. Kust +14 more
2018Applied and Environmental Microbiology26 citations Open access
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Skeletal Dysplasia Mutations Effect on Human Filamins’ Structure and Mechanosensing
Jonne Seppälä, R. Bernardi, T. Haataja, M. Hellman +5 more
2017Scientific Reports22 citations Open access
Semantic Scholar
Pseudoaeruginosins, nonribosomal peptides in Nodularia spumigena.
Liwei Liu, Adnan Budnjo, J. Jokela, Bengt Erik Haug +6 more
2015ACS Chemical Biology22 citations
Semantic Scholar
Serine synthesis pathway enzyme PHGDH is critical for muscle cell biomass, anabolic metabolism and mTORC1 signaling.
Sakari Mäntyselkä, Kalle Kolari, P. Baumert, L. Ylä-Outinen +7 more
2023American Journal of Physiology. Endocrinology and Metabolism21 citations Open access
Semantic Scholar
The Swinholide Biosynthesis Gene Cluster from a Terrestrial Cyanobacterium, Nostoc sp. Strain UHCC 0450
Anu Humisto, J. Jokela, Liwei Liu, M. Wahlsten +6 more
2017Applied and Environmental Microbiology21 citations Open access
Semantic Scholar
A novel intrinsically disordered outer membrane lipoprotein of Aggregatibacter actinomycetemcomitans binds various cytokines and plays a role in biofilm response to interleukin-1β and interleukin-8
Tuuli Ahlstrand, Heidi Tuominen, A. Beklen, Annamari Torittu +5 more
2016Virulence21 citations Open access
Semantic Scholar
A Novel Structural Unit in the N-terminal Region of Filamins*
R. Sethi, Jonne Seppälä, H. Tossavainen, Mikko Ylilauri +5 more
2014Journal of Biological Chemistry21 citations Open access
Semantic Scholar
Structure of Plasmodium falciparum TRAP (thrombospondin-related anonymous protein) A domain highlights distinct features in apicomplexan von Willebrand factor A homologues.
T. Pihlajamaa, T. Kajander, Juho Knuuti, Kaisa Horkka +2 more
2013Biochemical Journal20 citations
Semantic Scholar
Human adenosine A2A receptor binds calmodulin with high affinity in a calcium-dependent manner.
Henni Piirainen, M. Hellman, H. Tossavainen, P. Permi +2 more
2015Biophysical Journal19 citations Open access
Semantic Scholar
Maternal Inheritance of a Recessive RBP4 Defect in Canine Congenital Eye Disease
Maria Kaukonen, S. Woods, S. Ahonen, Seppo Lemberg +5 more
2018Cell Reports16 citations Open access
Semantic Scholar
Flexible Structure of Peptide-Bound Filamin A Mechanosensor Domain Pair 20–21
Jonne Seppälä, H. Tossavainen, N. Rodić, P. Permi +2 more
2015PLoS ONE15 citations Open access
Semantic Scholar
Bridge over troubled proline: assignment of intrinsically disordered proteins using (HCA)CON(CAN)H and (HCA)N(CA)CO(N)H experiments concomitantly with HNCO and i(HCA)CO(CA)NH
M. Hellman, Henni Piirainen, Veli-Pekka Jaakola, P. Permi
2013Journal of Biomolecular NMR15 citations
Semantic Scholar
HACANCOi: a new Hα-detected experiment for backbone resonance assignment of intrinsically disordered proteins
M. Karjalainen, H. Tossavainen, M. Hellman, P. Permi
2020Journal of Biomolecular NMR12 citations Open access
Semantic Scholar
Characterization of a Type II L-Asparaginase from the Halotolerant Bacillus subtilis CH11
Annsy Arredondo-Nuñez, Gisele Monteiro, C. N. Flores-Fernández, L. Antenucci +2 more
2023Life11 citations Open access
Semantic Scholar
Branched-Chain Amino Acid Deprivation Decreases Lipid Oxidation and Lipogenesis in C2C12 Myotubes
S. Karvinen, V. Fachada, Ulla-Maria Sahinaho, S. Pekkala +6 more
2022Metabolites11 citations Open access
Semantic Scholar
Discovery of varlaxins, new aeruginosin-type inhibitors of human trypsins.
L. M. P. Heinilä, J. Jokela, M. Ahmed, M. Wahlsten +6 more
2022Organic and biomolecular chemistry11 citations Open access
Semantic Scholar
Dispersion from Cα or NH: 4D experiments for backbone resonance assignment of intrinsically disordered proteins
H. Tossavainen, Santeri Salovaara, M. Hellman, R. Ihalin +1 more
2020Journal of Biomolecular NMR11 citations Open access
Semantic Scholar
Redox‐dependent disulfide bond formation in SAP30L corepressor protein: Implications for structure and function
Mikko Laitaoja, H. Tossavainen, T. Pihlajamaa, J. Valjakka +4 more
2016Protein Science10 citations Open access
Semantic Scholar
Secondary metabolite from Nostoc XPORK14A inhibits photosynthesis and growth of Synechocystis PCC 6803.
S. Shunmugam, J. Jokela, M. Wahlsten, N. Battchikova +8 more
2014Plant, Cell and Environment10 citations Open access
Semantic Scholar
Direct pathway cloning and expression of the radiosumin biosynthetic gene cluster.
Xia-Hui Ouyang, P. D'Agostino, M. Wahlsten, E. Delbaje +8 more
2023Organic and biomolecular chemistry9 citations Open access
Semantic Scholar
Higher glucose availability augments the metabolic responses of the C2C12 myotubes to exercise-like electrical pulse stimulation.
Juulia H. Lautaoja, T. O'Connell, Sakari Mäntyselkä, Juuli Peräkylä +4 more
2021American Journal of Physiology. Endocrinology and Metabolism9 citations Open access
Semantic Scholar
Fine-tuning the extent and dynamics of binding cleft opening as a potential general regulatory mechanism in parvulin-type peptidyl prolyl isomerases
A. Czajlik, Bertalan Kovács, P. Permi, Zoltán Gáspári
2017Scientific Reports9 citations Open access
Semantic Scholar
1H, 13C and 15N NMR chemical shift assignments of A. thaliana RCD1 RST
H. Tossavainen, M. Hellman, J. Vainonen, J. Kangasjärvi +1 more
2017Biomolecular NMR Assignments9 citations
Semantic Scholar
Reassessing the substrate specificities of the major Staphylococcus aureus peptidoglycan hydrolases lysostaphin and LytM
L. Antenucci, Salla I. Virtanen, Chandan Thapa, Minne Jartti +3 more
2024bioRxiv8 citations Open access
Semantic Scholar
Interaction mechanism of endogenous PP2A inhibitor protein ENSA with PP2A
Chandan Thapa, Pekka Roivas, T. Haataja, P. Permi +1 more
2021The FEBS Journal8 citations Open access
Semantic Scholar
The structure and biosynthesis of heinamides A1-A3 and B1-B5, antifungal members of the laxaphycin lipopeptide family.
Lassi Matti Petteri Heinilä, D. Fewer, J. Jokela, M. Wahlsten +4 more
2021Organic and biomolecular chemistry8 citations Open access
Semantic Scholar
The Interaction Mechanism of Intrinsically Disordered PP2A Inhibitor Proteins ARPP-16 and ARPP-19 With PP2A
Chandan Thapa, Pekka Roivas, T. Haataja, P. Permi +1 more
2021Frontiers in Molecular Biosciences8 citations Open access
Semantic Scholar
Enteroviruses and coronaviruses: similarities and therapeutic targets
V. Marjomäki, Kerttu Kalander, M. Hellman, P. Permi
2021Expert opinion on therapeutic targets8 citations Open access
Semantic Scholar
A Plastic Biosynthetic Pathway for the Production of Structurally Distinct Microbial Sunscreens
Sıla Arsın, E. Delbaje, J. Jokela, M. Wahlsten +3 more
2023ACS Chemical Biology7 citations Open access
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