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I. Domaizon · SciRah

Researcher profile · Semantic Scholar

I. Domaizon

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I. Domaizon — researcher profile on SciRah

h-index: 47
Works: 130
Citations: 6,559

Most-cited papers

The future of biotic indices in the ecogenomic era: Integrating (e)DNA metabarcoding in biological assessment of aquatic ecosystems.
J. Pawłowski, M. Kelly‐Quinn, F. Altermatt, L. Apothéloz-Perret-Gentil +29 more
2018Science of the Total Environment485 citations Open access
Semantic Scholar
Acceleration of cyanobacterial dominance in north temperate-subarctic lakes during the Anthropocene.
Z. Taranu, I. Gregory-Eaves, P. Leavitt, L. Bunting +12 more
2015Ecology Letters345 citations Open access
Semantic Scholar
Long livestock farming history and human landscape shaping revealed by lake sediment DNA
C. Giguet-Covex, Johan Pansu, F. Arnaud, Pierre-Jérôme Rey +8 more
2014Nature Communications328 citations Open access
Semantic Scholar
Structure of the rare archaeal biosphere and seasonal dynamics of active ecotypes in surface coastal waters
M. Hugoni, Najwa Taib, D. Debroas, I. Domaizon +6 more
2013Proceedings of the National Academy of Sciences of the United States of America238 citations Open access
Semantic Scholar
Protist taxonomic and functional diversity in soil, freshwater and marine ecosystems.
D. Singer, Christophe V. W. Seppey, Guillaume Lentendu, M. Dunthorn +15 more
2020Environment International236 citations Open access
Semantic Scholar
Lake Sedimentary DNA Research on Past Terrestrial and Aquatic Biodiversity: Overview and Recommendations
E. Capo, C. Giguet-Covex, A. Rouillard, Kevin Nota +46 more
2021Quaternary232 citations Open access
Semantic Scholar
Scientists’ Warning to Humanity: Rapid degradation of the world’s large lakes
J. Jenny, O. Anneville, F. Arnaud, Y. Baulaz +38 more
2020Journal of Great Lakes research229 citations Open access
Semantic Scholar
Homogenization of lake cyanobacterial communities over a century of climate change and eutrophication
Marie‐Eve Monchamp, P. Spaak, I. Domaizon, N. Dubois +2 more
2018Nature Ecology & Evolution188 citations Open access
Semantic Scholar
Overview of freshwater microbial eukaryotes diversity: a first analysis of publicly available metabarcoding data.
D. Debroas, I. Domaizon, J. Humbert, L. Jardillier +3 more
2017FEMS Microbiology Ecology169 citations Open access
Semantic Scholar
Short-term dynamics of diversity patterns: evidence of continual reassembly within lacustrine small eukaryotes.
Jean-François Mangot, I. Domaizon, Najwa Taib, N. Marouni +3 more
2013Environmental Microbiology160 citations
Semantic Scholar
Patterns and drivers of deep chlorophyll maxima structure in 100 lakes: The relative importance of light and thermal stratification
Taylor H. Leach, B. Beisner, Cayelan C. Carey, P. Pernica +12 more
2018159 citations Open access
Semantic Scholar
Avoiding quantification bias in metabarcoding: Application of a cell biovolume correction factor in diatom molecular biomonitoring
V. Vasselon, A. Bouchez, F. Rimet, S. Jacquet +4 more
2017123 citations Open access
Semantic Scholar
DNA-based methods in paleolimnology: new opportunities for investigating long-term dynamics of lacustrine biodiversity
I. Domaizon, A. Winegardner, E. Capo, J. Gauthier +1 more
2017Journal of Paleolimnology112 citations
Semantic Scholar
Application of high-throughput sequencing (HTS) metabarcoding to diatom biomonitoring: Do DNA extraction methods matter?
V. Vasselon, I. Domaizon, F. Rimet, M. Kahlert +1 more
2017Freshwater Science107 citations Open access
Semantic Scholar
Phylogenetic Affiliation of SSU rRNA Genes Generated by Massively Parallel Sequencing: New Insights into the Freshwater Protist Diversity
Najwa Taib, Jean-François Mangot, I. Domaizon, G. Bronner +1 more
2013PLoS ONE98 citations Open access
Semantic Scholar
Evidence for an active rare biosphere within freshwater protists community
D. Debroas, M. Hugoni, I. Domaizon
2015Molecular Ecology90 citations
Semantic Scholar
Trophic transfer of microcystins through the lake pelagic food web: evidence for the role of zooplankton as a vector in fish contamination.
Benoît Sotton, J. Guillard, O. Anneville, M. Maréchal +2 more
2014Science of the Total Environment86 citations
Semantic Scholar
Tracking a century of changes in microbial eukaryotic diversity in lakes driven by nutrient enrichment and climate warming
E. Capo, D. Debroas, F. Arnaud, M. Perga +2 more
2017Environmental Microbiology84 citations
Semantic Scholar
The Observatory on LAkes (OLA) database: Sixty years of environmental data accessible to the public
F. Rimet, O. Anneville, D. Barbet, C. Chardon +18 more
202083 citations Open access
Semantic Scholar
Long‐term dynamics in microbial eukaryotes communities: a palaeolimnological view based on sedimentary DNA
E. Capo, D. Debroas, F. Arnaud, T. Guillemot +8 more
2016Molecular Ecology78 citations
Semantic Scholar
DNA from lake sediments reveals the long-term dynamics and diversity of Synechococcus assemblages
I. Domaizon, O. Savichtcheva, D. Debroas, F. Arnaud +4 more
201377 citations Open access
Semantic Scholar
Assessing the response of micro-eukaryotic diversity to the Great Acceleration using lake sedimentary DNA
F. Keck, L. Millet, D. Debroas, D. Etienne +3 more
2020Nature Communications72 citations Open access
Semantic Scholar
Diversity, spatial distribution and activity of fungi in freshwater ecosystems
Cécile Lepère, I. Domaizon, J. Humbert, L. Jardillier +2 more
2019PeerJ62 citations Open access
Semantic Scholar
Is Planktonic Diversity Well Recorded in Sedimentary DNA? Toward the Reconstruction of Past Protistan Diversity
E. Capo, D. Debroas, F. Arnaud, I. Domaizon
2015Microbial Ecology61 citations
Semantic Scholar
Invasions Toolkit: Current Methods for Tracking the Spread and Impact of Invasive Species
S. Kamenova, T. Bartley, David A. Bohan, J. R. Boutain +9 more
201760 citations
Semantic Scholar
Geographic distance and ecosystem size determine the distribution of smallest protists in lacustrine ecosystems.
Cécile Lepère, I. Domaizon, Najwa Taib, Jean-François Mangot +3 more
2013FEMS Microbiology Ecology59 citations Open access
Semantic Scholar
High-resolution paleolimnology opens new management perspectives for lakes adaptation to climate warming
M. Perga, V. Frossard, J. Jenny, Benjamin Alric +19 more
2015Frontiers in Ecology and Evolution58 citations Open access
Semantic Scholar
Dynamics of ammonia-oxidizing Archaea and Bacteria in contrasted freshwater ecosystems.
M. Hugoni, Sandrine Etien, A. Bourges, Cécile Lepère +5 more
2013Research in Microbiology55 citations Open access
Semantic Scholar
Blue-Green Algae in a “Greenhouse Century”? New Insights from Field Data on Climate Change Impacts on Cyanobacteria Abundance
O. Anneville, I. Domaizon, O. Kerimoglu, F. Rimet +1 more
2015Ecosystems52 citations
Semantic Scholar
Environmental paleomicrobiology: using DNA preserved in aquatic sediments to its full potential
E. Capo, Marie‐Eve Monchamp, M. Coolen, I. Domaizon +2 more
2022Environmental Microbiology46 citations Open access
Semantic Scholar
The need for ecological monitoring of freshwaters in a changing world: a case study of Lakes Annecy, Bourget, and Geneva
S. Jacquet, I. Domaizon, O. Anneville
2014Environmental Monitoring & Assessment44 citations
Semantic Scholar
Nodularin and cylindrospermopsin: a review of their effects on fish
Benoît Sotton, I. Domaizon, O. Anneville, F. Cattanéo +1 more
2014Reviews in Fish Biology and Fisheries44 citations Open access
Semantic Scholar
Spatio-temporal variability of eDNA signal and its implication for fish monitoring in lakes
Alix Hervé, I. Domaizon, J. Baudoin, T. Dejean +7 more
2022PLoS ONE40 citations Open access
Semantic Scholar
Diversity and Dynamics of Active Small Microbial Eukaryotes in the Anoxic Zone of a Freshwater Meromictic Lake (Pavin, France)
Cécile Lepère, I. Domaizon, M. Hugoni, A. Vellet +1 more
2016Frontiers in Microbiology40 citations Open access
Semantic Scholar
Multi-scale phylogenetic heterogeneity of archaea, bacteria, methanogens and methanotrophs in lake sediments
Elodie Billard, I. Domaizon, N. Tissot, F. Arnaud +1 more
2015Hydrobiologia40 citations
Semantic Scholar
Effects of nutrients and warming on Planktothrix dynamics and diversity: a palaeolimnological view based on sedimentary DNA and RNA
O. Savichtcheva, D. Debroas, M. Perga, F. Arnaud +6 more
201537 citations
Semantic Scholar
Temporal dynamics of active Archaea in oxygen-depleted zones of two deep lakes.
M. Hugoni, I. Domaizon, Najwa Taib, C. Biderre-Petit +4 more
2015Environmental Microbiology Reports35 citations Open access
Semantic Scholar
Fish eDNA metabarcoding from aquatic biofilm samples: Methodological aspects
S. F. Rivera, F. Rimet, V. Vasselon, Marine Vautier +2 more
2021Molecular Ecology Resources34 citations Open access
Semantic Scholar
Seasonal Dynamics of Abundance, Structure, and Diversity of Methanogens and Methanotrophs in Lake Sediments
E. Lyautey, Elodie Billard, N. Tissot, S. Jacquet +1 more
2021Microbial Ecology33 citations Open access
Semantic Scholar
Investigating the effects of anthropogenic stressors on lake biota using sedimentary DNA
Cécilia Barouillet, Marie‐Eve Monchamp, S. Bertilsson, K. Brasell +14 more
2022Freshwater Biology32 citations Open access
Semantic Scholar
DNA sequence and taxonomic gap analyses to quantify the coverage of aquatic cyanobacteria and eukaryotic microalgae in reference databases: Results of a survey in the Alpine region.
N. Salmaso, V. Vasselon, F. Rimet, Marine Vautier +26 more
2022Science of the Total Environment32 citations Open access
Semantic Scholar
When is sampling complete? The effects of geographical range and marker choice on perceived diversity in Nitzschia palea (Bacillariophyta).
F. Rimet, R. Trobajo, D. G. Mann, L. Kermarrec +3 more
2014Protist32 citations
Semantic Scholar
A quantitative eDNA-based approach to monitor fish spawning in lakes: Application to European perch and whitefish
Marine Vautier, C. Chardon, C. Goulon, J. Guillard +1 more
2023Fisheries Research27 citations Open access
Semantic Scholar
Macrophytes moderate the taxonomic and functional composition of phytoplankton assemblages during a nutrient loading experiment
Jennifer L. Barrow, B. Beisner, R. Giles, A. Giani +2 more
2019Freshwater Biology25 citations
Semantic Scholar
Trophic relationships between metazooplankton communities and their plankton food sources in the Iles Eparses (Western Indian Ocean).
C. Dupuy, M. Pagano, P. Got, I. Domaizon +3 more
2016Marine Environmental Research23 citations Open access
Semantic Scholar
To what extent is the DNA of microbial eukaryotes modified during burying into lake sediments? A repeat-coring approach on annually laminated sediments
E. Capo, I. Domaizon, Dominique Béatrice Maier, D. Debroas +1 more
2017Journal of Paleolimnology22 citations
Semantic Scholar
Global distribution of Trebouxiophyceae diversity explored by high-throughput sequencing and phylogenetic approaches.
S. Metz, D. Singer, I. Domaizon, F. Unrein +1 more
2019Environmental Microbiology20 citations Open access
Semantic Scholar
Development and implementation of eco-genomic tools for aquatic ecosystem biomonitoring: the SYNAQUA French-Swiss program
E. Lefrancois, L. Apothéloz-Perret-Gentil, P. Blancher, Samuel Botreau +20 more
2018Environmental science and pollution research international20 citations Open access
Semantic Scholar
Temporal Dynamics of Active Prokaryotic Nitrifiers and Archaeal Communities from River to Sea
M. Hugoni, H. Agogué, Najwa Taib, I. Domaizon +5 more
2015Microbial Ecology20 citations Open access
Semantic Scholar
Impact of Toxic Cyanobacterial Blooms on Eurasian Perch (Perca fluviatilis): Experimental Study and In Situ Observations in a Peri-Alpine Lake
Benoît Sotton, J. Guillard, S. Bony, A. Devaux +5 more
2012PLoS ONE19 citations Open access
Semantic Scholar

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