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O. McDonald · SciRah

Researcher profile · Semantic Scholar

O. McDonald

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O. McDonald — researcher profile on SciRah

h-index: 22
Works: 51
Citations: 3,303

Most-cited papers

Large-scale epigenomic reprogramming during pancreatic cancer progression links anabolic glucose metabolism to distant metastasis
O. McDonald, Xin Li, T. Saunders, Rakel Tryggvadottir +14 more
2017Nature Genetics442 citations Open access
Semantic Scholar
Genome-scale epigenetic reprogramming during epithelial to mesenchymal transition
O. McDonald, Hao Wu, W. Timp, A. Doi +1 more
2011Nature Structural &Molecular Biology389 citations Open access
Semantic Scholar
Kruppel-like Factor 4 Abrogates Myocardin-induced Activation of Smooth Muscle Gene Expression*
Yan Liu, S. Sinha, O. McDonald, Yueting Shang +2 more
2005Journal of Biological Chemistry369 citations Open access
Semantic Scholar
Control of SRF binding to CArG box chromatin regulates smooth muscle gene expression in vivo.
O. McDonald, B. Wamhoff, M. Hoofnagle, G. Owens
2005Journal of Clinical Investigation293 citations Open access
Semantic Scholar
Concise Review: Epigenetic Mechanisms Contribute to Pluripotency and Cell Lineage Determination of Embryonic Stem Cells
Qiong Gan, Tadashi Yoshida, O. McDonald, G. Owens
2007Stem Cells210 citations
Semantic Scholar
Large hypomethylated blocks as a universal defining epigenetic alteration in human solid tumors
W. Timp, H. C. Bravo, O. McDonald, M. Goggins +4 more
2014Genome Medicine196 citations Open access
Semantic Scholar
Atherosclerosis-prone hemodynamics differentially regulates endothelial and smooth muscle cell phenotypes and promotes pro-inflammatory priming.
N. Hastings, Michael B. Simmers, O. McDonald, B. Wamhoff +1 more
2007American Journal of Physiology - Cell Physiology182 citations
Semantic Scholar
Programming smooth muscle plasticity with chromatin dynamics.
O. McDonald, G. Owens
2007Circulation Research177 citations Open access
Semantic Scholar
PRISM/PRDM6, a Transcriptional Repressor That Promotes the Proliferative Gene Program in Smooth Muscle Cells
C. Davis, M. Haberland, Michael A. Arnold, L. Sutherland +6 more
2006Molecular and Cellular Biology135 citations Open access
Semantic Scholar
5' CArG degeneracy in smooth muscle alpha-actin is required for injury-induced gene suppression in vivo.
J. A. Hendrix, B. Wamhoff, O. McDonald, S. Sinha +2 more
2005Journal of Clinical Investigation111 citations Open access
Semantic Scholar
A Selective Phenelzine Analogue Inhibitor of Histone Demethylase LSD1
P. Prusevich, Jay H. Kalin, Shonoi A. Ming, M. Basso +18 more
2014ACS Chemical Biology97 citations Open access
Semantic Scholar
Molecular haplotyping of genomic DNA for multiple single-nucleotide polymorphisms located kilobases apart using long-range polymerase chain reaction and intramolecular ligation.
O. McDonald, E. Krynetski, W. Evans
2002Pharmacogenetics (London)76 citations
Semantic Scholar
Fine-Needle Aspiration-Based Patient-Derived Cancer Organoids
A. Vilgelm, Kensey Bergdorf, M. Wolf, Vijaya Bharti +20 more
2020iScience71 citations Open access
Semantic Scholar
A Comparative Clinicopathologic Study of Collagenous Gastritis in Children and Adults: The Same Disorder With Associated Immune-mediated Diseases
Changqing Ma, Jason Y. Park, E. Montgomery, C. Arnold +7 more
2015American Journal of Surgical Pathology66 citations
Semantic Scholar
Three-dimensional culture system identifies a new mode of cetuximab resistance and disease-relevant genes in colorectal cancer
Cun-Xi Li, Bhuminder Singh, Ramona Graves‐Deal, Haiting Ma +16 more
2017Proceedings of the National Academy of Sciences of the United States of America43 citations Open access
Semantic Scholar
Activation of NOTCH signaling via DLL1 is mediated by APE1-redox-dependent NF-κB activation in esophageal adenocarcinoma
Lei Chen, Heng Lu, D. Peng, Long-Long Cao +11 more
2022Gut38 citations
Semantic Scholar
Activation of NRF2 by APE1/REF1 is redox-dependent in Barrett's related esophageal adenocarcinoma cells
Kannappan Sriramajayam, D. Peng, Heng Lu, Shouming Zhou +5 more
2021Redox Biology38 citations Open access
Semantic Scholar
CDK1 bridges NF-κB and β-catenin signaling in response to H. pylori infection in gastric tumorigenesis
Shou-Min Zhu, Marwah M. Al-Mathkour, Long-Long Cao, Shayan Khalafi +9 more
2023Cell Reports34 citations Open access
Semantic Scholar
Pancreatic cancers suppress negative feedback of glucose transport to reprogram chromatin for metastasis
M. Bechard, Rana Smalling, Akimasa Hayashi, Yi Zhong +7 more
2020Nature Communications31 citations Open access
Semantic Scholar
Human Correlates of Provocative Questions in Pancreatic Pathology
O. McDonald, A. Maitra, R. Hruban
2012Advances in Anatomic Pathology29 citations Open access
Semantic Scholar
Obtaining patient-derived cancer organoid cultures via fine-needle aspiration
Courtney J. Phifer, Kensey Bergdorf, M. Bechard, A. Vilgelm +4 more
2020STAR Protocols24 citations Open access
Semantic Scholar
Pentose conversions support the tumorigenesis of pancreatic cancer distant metastases
M. Bechard, Anna E Word, Amanda V. Tran, Xiao-Jing Liu +2 more
2018Oncogene24 citations Open access
Semantic Scholar
Cytomegalovirus Enterocolitis in Immunocompetent Young Children: A Report of Two Cases and Review of the Literature
P. Sue, N. Salazar-Austin, O. McDonald, Arvind Rishi +2 more
2016The Pediatric Infectious Disease Journal22 citations Open access
Semantic Scholar
MicroRNA-like snoRNA-Derived RNAs (sdRNAs) Promote Castration-Resistant Prostate Cancer
Alexander B Coley, Ashlyn N. Stahly, M. Kasukurthi, Addison A. Barchie +21 more
2022Cells21 citations Open access
Semantic Scholar
Lactic Acid Production from Potato Peel Waste, Spent Coffee Grounds and Almond Shells with Undefined Mixed Cultures Isolated from Coffee Mucilage from Coatepec Mexico
Andrés Bretón-Toral, S. Trejo-Estrada, O. McDonald
201620 citations Open access
Semantic Scholar
Immunofluorescent staining of cancer spheroids and fine-needle aspiration-derived organoids
Kensey Bergdorf, Courtney J. Phifer, M. Bechard, Mason A. Lee +3 more
2021STAR Protocols19 citations Open access
Semantic Scholar
ERα-mediated nuclear sequestration of RSK2 is required for ER+ breast cancer tumorigenesis
Katarzyna A. Ludwik, O. McDonald, D. Brenin, D. Lannigan
2018Cancer Research19 citations Open access
Semantic Scholar
The morphologic spectrum of gastric type 1 enterochromaffin-like cell neuroendocrine tumors
Julio C. Poveda, S. Chahar, M. Garcia-Buitrago, Elizabeth A. Montgomery +1 more
2023Modern Pathology18 citations
Semantic Scholar
APE1 redox function is required for activation of Yes-associated protein 1 under reflux conditions in Barrett’s-associated esophageal adenocarcinomas
Farah Ballout, Heng Lu, Lei Chen, Kannappan Sriramajayam +8 more
2022Journal of experimental & clinical cancer research : CR18 citations Open access
Semantic Scholar
Metanephric Stromal Tumor Arising in a Patient With Neurofibromatosis Type 1 Syndrome
O. McDonald, Ron Rodriguez, A. Bergner, P. Argani
2011International Journal of Surgical Pathology16 citations
Semantic Scholar
Exposure to p40 in Early Life Prevents Intestinal Inflammation in Adulthood Through Inducing a Long-Lasting Epigenetic Imprint on TGFβ
Yilin Deng, O. McDonald, A. Means, R. Peek +4 more
2021Cellular and Molecular Gastroenterology and Hepatology15 citations Open access
Semantic Scholar
The biology of pancreatic cancer morphology
O. McDonald
2021Pathology (Sydney)15 citations Open access
Semantic Scholar
Unfolded Protein Response Is Activated by Aurora Kinase A in Esophageal Adenocarcinoma
Heng Lu, A. Gomaa, Lihong Wang-Bishop, Farah Ballout +8 more
2022Cancers11 citations Open access
Semantic Scholar
Element Mediates Repression of the SM 22 Promoter Within Phenotypically Modulated Smooth Muscle Cells in Experimental Atherosclerosis
B. Wamhoff, M. Hoofnagle, A. Burns, S. Sinha +2 more
20049 citations
Semantic Scholar
Global Switch from DICER-dependent MicroRNA to DICER-independent SnoRNA-derived RNA Biogenesis in Malignancy
Noel L Godang, Jeffrey D. DeMeis, D. Houserova, N. Y. Chaudhary +4 more
2023microPublication Biology8 citations
Semantic Scholar
MicroRNA-like snoRNA-derived RNAs (sdRNAs) promote castration resistant prostate cancer
Alexander B Coley, Ashlyn N. Stahly, M. Kasukurthi, Addison A. Barchie +20 more
2021bioRxiv8 citations Open access
Semantic Scholar
Pancreatic cancer epigenetics: adaptive metabolism reprograms starving primary tumors for widespread metastatic outgrowth
Arnaldo J. Franco Torres, Jeff Duryea, O. McDonald
2023Cancer Metastasis Review5 citations Open access
Semantic Scholar
Aminopyridine analogs selectively target metastatic pancreatic cancer
Rana V. Smalling, M. Bechard, Jeff Duryea, Philip J. Kingsley +5 more
2022Oncogene4 citations Open access
Semantic Scholar
Cancer metastasis: selectable traits without genetic constraints
O. McDonald
2020Molecular & Cellular Oncology3 citations Open access
Semantic Scholar
Histologic Features of Syphilitic Gastritis.
N. Assarzadegan, Jia-Yun M. Fang, L. Voltaggio, R. Riddell +8 more
2023American Journal of Clinical Pathology2 citations Open access
Semantic Scholar
Artificial intelligence for dysplasia grading in Barrett’s esophagus: hematoxylin and eosin is here to stay
O. McDonald, Elizabeth A. Montgomery
2022Gastrointestinal Endoscopy2 citations Open access
Semantic Scholar
Tu1268 REFLUX CONDITIONS-INDUCED E-CADHERIN CLEAVAGE AND EPITHELIAL-TO-MESENCHYMAL TRANSITION IS MEDIATED BY APE1 REDOX FUNCTION IN ESOPHAGEAL ADENOCARCINOMA
Heng Lu, Long-Long Cao, Farah Ballout, A. Belkhiri +9 more
2023Gastroenterology1 citations
Semantic Scholar
Abstract 1232: Gastroesophageal reflux disease promotes E-cadherin cleavage and activates EMT via APE1-redox function in esophageal adenocarcinoma
Heng Lu, Long-Long Cao, Farah Ballout, A. Belkhiri +7 more
2023Cancer Research0 citations
Semantic Scholar
Mo1261 HIGH EXPRESSION OF FGFR4 PROMOTES GASTRIC CANCER THROUGH BINDING TO P62-KEAP1 AND NUCLEAR ACCUMULATION OF NRF2
M. Soutto, Xing Zhang, Zheng Chen, N. Bhat +7 more
2023Gastroenterology0 citations
Semantic Scholar
933 ACTIVATION OF NOTCH SIGNALING VIA DLL1 IS MEDIATED BY APE1-REDOX-DEPENDENT NF-KB ACTIVATION IN ESOPHAGEAL ADENOCARCINOMA
Lei Chen, Heng Lu, D. Peng, Farah Ballout +5 more
2023Gastroenterology0 citations
Semantic Scholar
Tu1121: INDUCTION OF FGFR4 BY H. PYLORI MEDIATES ACTIVATION OF STAT3 THROUGH SRC SIGNALING IN GASTRIC CANCER
M. Soutto, Xing Zhang, Zheng Chen, N. Bhat +7 more
2022Gastroenterology0 citations
Semantic Scholar
Some Morphology Frontiers of Dysplasia in the Tubular Gastrointestinal Tract: The Rodger C. Haggitt Memorial Lecture.
E. Montgomery, C. Arnold, D. Lam-Himlin, O. McDonald +6 more
2020American Journal of Surgical Pathology0 citations
Semantic Scholar
Fine-Needle Aspiration Use in Organoid Research
Courtney J. Phifer, Kensey N Bergdorf, O. McDonald, A. Vilgelm +1 more
2020Journal of the American Society of Cytopathology0 citations
Semantic Scholar
Tu1857 – Neonatal Supplementation with a Lactobacillus Rhamnosus Gg (LGG)-Derived Protein, P40, Stimulates Persistent Induction of Regulatory T Cells in the Intestine Through Epigenetic Programming in Intestinal Epithelial Cells
Yilin Deng, Liping Liu, O. McDonald, K. Wilson +4 more
2019Gastroenterology0 citations Open access
Semantic Scholar
Abstract 5013: A 3D culture system identifies a new mode of cetuximab resistance and disease-relevant genes in colorectal cancer
Bhuminder Singh, Cun-Xi Li, Ramona Graves‐Deal, Haiting Ma +15 more
20170 citations
Semantic Scholar

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