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O. Samek · SciRah

Researcher profile · Semantic Scholar

O. Samek

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O. Samek — researcher profile on SciRah

h-index: 37
Works: 165
Citations: 3,535

Most-cited papers

Following the Mechanisms of Bacteriostatic versus Bactericidal Action Using Raman Spectroscopy
Silvie Bernatová, O. Samek, Z. Pilát, M. Šerý +8 more
2013Molecules114 citations Open access
Semantic Scholar
Accumulation of Poly(3-hydroxybutyrate) Helps Bacterial Cells to Survive Freezing
S. Obruča, P. Sedláček, V. Krzyžánek, F. Mravec +5 more
2016PLoS ONE85 citations Open access
Semantic Scholar
Evaluation of 3-hydroxybutyrate as an enzyme-protective agent against heating and oxidative damage and its potential role in stress response of poly(3-hydroxybutyrate) accumulating cells
S. Obruča, P. Sedláček, F. Mravec, O. Samek +1 more
2016Applied Microbiology and Biotechnology85 citations
Semantic Scholar
Rapid identification of staphylococci by Raman spectroscopy
K. Rebrošová, M. Šiler, O. Samek, F. Ru̇žička +6 more
2017Scientific Reports74 citations Open access
Semantic Scholar
Light scattering on PHA granules protects bacterial cells against the harmful effects of UV radiation
E. Slaninová, P. Sedláček, F. Mravec, L. Mullerova +6 more
2018Applied Microbiology and Biotechnology72 citations
Semantic Scholar
The presence of PHB granules in cytoplasm protects non-halophilic bacterial cells against the harmful impact of hypertonic environments.
S. Obruča, P. Sedláček, F. Mravec, V. Krzyžánek +7 more
2017New Biotechnology70 citations
Semantic Scholar
Combination of laser-induced breakdown spectroscopy and Raman spectroscopy for multivariate classification of bacteria
D. Prochazka, M. Mazura, O. Samek, K. Rebrošová +6 more
201860 citations
Semantic Scholar
Raman Spectroscopy—A Novel Method for Identification and Characterization of Microbes on a Single-Cell Level in Clinical Settings
K. Rebrošová, O. Samek, Martin Kizovský, Silvie Bernatová +2 more
2022Frontiers in Cellular and Infection Microbiology59 citations Open access
Semantic Scholar
Algal Biomass Analysis by Laser-Based Analytical Techniques—A Review
P. Pořízka, P. Procházková, D. Prochazka, L. Sládková +10 more
2014Italian National Conference on Sensors59 citations Open access
Semantic Scholar
Microplastics in animal nutrition: Occurrence, spread, and hazard in animals
Aamir Khan, Abdul Qadeer, Abdul Wajid, Qudrat Ullah +9 more
2024Journal of Agriculture and Food Research58 citations Open access
Semantic Scholar
Accumulation of PHA granules in Cupriavidus necator as seen by confocal fluorescence microscopy.
F. Mravec, S. Obruča, V. Krzyžánek, P. Sedláček +5 more
2016FEMS Microbiology Letters58 citations
Semantic Scholar
Laser-based techniques: Novel tools for the identification and characterization of aged microplastics with developed biofilm.
P. Pořízka, L. Brunnbauer, Michaela Porkert, U. Rozman +8 more
2022Chemosphere50 citations Open access
Semantic Scholar
Raman microspectroscopy of algal lipid bodies: β-carotene quantification
Z. Pilát, Silvie Bernatová, J. Ježek, M. Šerý +4 more
2012Journal of Applied Phycology50 citations
Semantic Scholar
Characterization of oil-producing microalgae using Raman spectroscopy
O. Samek, P. Zemánek, A. Jonáš, H. Telle
201149 citations Open access
Semantic Scholar
Candida parapsilosis Biofilm Identification by Raman Spectroscopy
O. Samek, Katarína Mlynáriková, Silvie Bernatová, J. Ježek +6 more
2014International Journal of Molecular Sciences46 citations Open access
Semantic Scholar
Microfluidic Cultivation and Laser Tweezers Raman Spectroscopy of E. coli under Antibiotic Stress
Z. Pilát, Silvie Bernatová, J. Ježek, Johanna Kirchhoff +4 more
2018Italian National Conference on Sensors43 citations Open access
Semantic Scholar
Wavelength-Dependent Optical Force Aggregation of Gold Nanorods for SERS in a Microfluidic Chip
Silvie Bernatová, M. Donato, J. Ježek, Z. Pilát +5 more
2019Journal of Physical Chemistry C42 citations
Semantic Scholar
Influence of Culture Media on Microbial Fingerprints Using Raman Spectroscopy
Katarína Mlynáriková, O. Samek, Silvie Bernatová, F. Ru̇žička +5 more
2015Italian National Conference on Sensors41 citations Open access
Semantic Scholar
What keeps polyhydroxyalkanoates in bacterial cells amorphous? A derivation from stress exposure experiments
P. Sedláček, E. Slaninová, V. Enev, M. Koller +6 more
2019Applied Microbiology and Biotechnology40 citations
Semantic Scholar
MicrobioRaman: an open-access web repository for microbiological Raman spectroscopy data
K. Lee, Zachary C. Landry, Awais Athar, Uria Alcolombri +57 more
2024Nature Microbiology37 citations Open access
Semantic Scholar
Monitoring Candida parapsilosis and Staphylococcus epidermidis Biofilms by a Combination of Scanning Electron Microscopy and Raman Spectroscopy
K. Hrubanova, V. Krzyžánek, J. Nebesářová, F. Ru̇žička +2 more
2018Italian National Conference on Sensors36 citations Open access
Semantic Scholar
Quantitative Raman Spectroscopy Analysis of Polyhydroxyalkanoates Produced by Cupriavidus necator H16
O. Samek, S. Obruča, M. Šiler, P. Sedláček +6 more
2016Italian National Conference on Sensors35 citations Open access
Semantic Scholar
Application of laser-induced breakdown spectroscopy to the analysis of algal biomass for industrial biotechnology
P. Pořízka, D. Prochazka, Z. Pilát, L. Krajcarová +12 more
201235 citations
Semantic Scholar
The potential of SERS as an AST methodology in clinical settings
O. Samek, Silvie Bernatová, F. Dohnal
2021Nanophotonics31 citations Open access
Semantic Scholar
Physiological and transcriptome profiling of Chlorella sorokiniana: A study on azo dye wastewater decolorization.
Vladimira Tarbajova, M. Kolackova, P. Chaloupský, Markéta Dobešová +11 more
2023Journal of Hazardous Materials27 citations
Semantic Scholar
Raman spectroscopy-a tool for rapid differentiation among microbes causing urinary tract infections.
K. Rebrošová, Silvie Bernatová, M. Šiler, Magdalena Uhlířová +5 more
2021Analytica Chimica Acta27 citations
Semantic Scholar
Differentiation between Staphylococcus aureus and Staphylococcus epidermidis strains using Raman spectroscopy.
K. Rebrošová, M. Šiler, O. Samek, F. Ru̇žička +4 more
2017Future Microbiology24 citations
Semantic Scholar
Glycogen, poly(3-hydroxybutyrate) and pigment accumulation in three Synechocystis strains when exposed to a stepwise increasing salt stress
K. Meixner, C. Daffert, D. Dalnodar, K. Mrázová +9 more
2022Journal of Applied Phycology23 citations Open access
Semantic Scholar
SERS-Tags: Selective Immobilization and Detection of Bacteria by Strain-Specific Antibodies and Surface-Enhanced Raman Scattering
M. Benešová, Silvie Bernatová, F. Mika, Z. Pokorná +7 more
2023Biosensors22 citations Open access
Semantic Scholar
Identification of individual biofilm-forming bacterial cells using Raman tweezers
O. Samek, Silvie Bernatová, J. Ježek, M. Šiler +6 more
2015Journal of Biomedical Optics18 citations Open access
Semantic Scholar
The role of polyhydroxyalkanoates in adaptation of Cupriavidus necator to osmotic pressure and high concentration of copper ions.
Ivana Novackova, Vendula Hrabalová, E. Slaninová, P. Sedláček +7 more
2022International Journal of Biological Macromolecules17 citations
Semantic Scholar
Identification of ability to form biofilm in Candida parapsilosis and Staphylococcus epidermidis by Raman spectroscopy.
K. Rebrošová, M. Šiler, O. Samek, F. Ru̇žička +4 more
2019Future Microbiology17 citations
Semantic Scholar
Raman microspectroscopy and laser-induced breakdown spectroscopy for the analysis of polyethylene microplastics in human soft tissues
V. Parobková, Daniel Holub, Martin Kizovský, G. Kalčíková +7 more
2024Heliyon16 citations
Semantic Scholar
Application of advanced light microscopic techniques to gain deeper insights into cheese matrix physico-chemistry
Z. Burdíková, Z. Svindrych, C. Hickey, M. Wilkinson +6 more
201516 citations Open access
Semantic Scholar
Rapid detection of antibiotic sensitivity of Staphylococcus aureus by Raman tweezers
Silvie Bernatová, Katarína Rebrošová, Z. Pilát, M. Šerý +9 more
2021The European Physical Journal Plus15 citations
Semantic Scholar
Use of Waste Substrates for the Lipid Production by Yeasts of the Genus Metschnikowia—Screening Study
A. Němcová, Martin Szotkowski, O. Samek, Linda Cagáňová +2 more
2021Microorganisms14 citations Open access
Semantic Scholar
The Use of Raman Spectroscopy to Monitor Metabolic Changes in Stressed Metschnikowia sp. Yeasts
A. Němcová, Dominika Gonová, O. Samek, M. Sipiczki +2 more
2021Microorganisms11 citations Open access
Semantic Scholar
Analysis of bacteriophage-host interaction by Raman tweezers.
Z. Pilát, A. Jonáš, J. Pilátová, T. Klementová +9 more
2020Analytical Chemistry11 citations
Semantic Scholar
Rapid Identification of Pathogens Causing Bloodstream Infections by Raman Spectroscopy and Raman Tweezers
K. Rebrošová, Silvie Bernatová, M. Šiler, Jan Mašek +6 more
2023Microbiology spectrum10 citations Open access
Semantic Scholar
Identification of staphyloxanthin and derivates in yellow-pigmented Staphylococcus capitis subsp. capitis
Katharina Siems, Katharina Runzheimer, K. Rebrošová, Lara Etzbach +7 more
2023Frontiers in Microbiology9 citations Open access
Semantic Scholar
Raman Microspectroscopic Analysis of Selenium Bioaccumulation by Green Alga Chlorella vulgaris
Martin Kizovský, Z. Pilát, M. Mylenko, P. Hrouzek +12 more
2021Biosensors9 citations Open access
Semantic Scholar
Rapid identification of pathogens in blood serum via Raman tweezers in combination with advanced processing methods
Ondřej Vaculík, Silvie Bernatová, K. Rebrošová, O. Samek +6 more
2023Biomedical Optics Express8 citations Open access
Semantic Scholar
Detection of Chloroalkanes by Surface-Enhanced Raman Spectroscopy in Microfluidic Chips
Z. Pilát, Martin Kizovský, J. Ježek, S. Kratky +8 more
2018Italian National Conference on Sensors7 citations Open access
Semantic Scholar
The effects of the treatment conditions on the dissolution profile of ethylcellulose coated pellets
S. Pavloková, J. Muselík, Dana Sabadková, Silvie Bernatová +3 more
2019European Journal of Pharmaceutical Sciences5 citations
Semantic Scholar
Polyhydroxyalkanoates in Bacterial Cells - More Than just Storage Materials
S. Obruča, L. Doskočil, V. Krzyžánek, K. Hrubanova +6 more
20165 citations
Semantic Scholar
Characterization of microorganisms using Raman tweezers
O. Samek, Z. Pilát, A. Jonáš, P. Zemánek +5 more
2011NanoScience + Engineering5 citations
Semantic Scholar
Surface-Enhanced Raman Spectroscopy for Adenine Detection in Five Selected Bacterial Strains Under Stress Conditions
Mona Ghazalová, P. Modlitbová, O. Samek, K. Rebrošová +3 more
2025Italian National Conference on Sensors4 citations Open access
Semantic Scholar
Cryo-SEM and Raman Spectroscopy Study of the Involvement of Polyhydroxyalkanoates in Stress Response of Bacteria
Vladislav Krzyzanek, Kamila Hrubanova, O. Samek, S. Obruča +4 more
2015Microscopy and Microanalysis4 citations Open access
Semantic Scholar
Morphological and Production Changes in Stressed Red Yeasts Monitored Using SEM and Raman Spectroscopy
Kamila Hrubanova, O. Samek, Andrea Haronikova, Silvie Bernatová +3 more
2016Microscopy and Microanalysis3 citations Open access
Semantic Scholar
Following lipids in the food chain: determination of the iodine value using Raman micro-spectroscopy
O. Samek, P. Zemánek
20123 citations
Semantic Scholar

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P. Zemánek×27
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Silvie Bernatová×25
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M. Šiler×19
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J. Ježek×18
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V. Krzyžánek×14

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F. Ru̇žička×13

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V. Holá — researcher profile on SciRah

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K. Rebrošová×11

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K. Hrubanova×10

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P. Sedláček×9

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P. Sedláček — researcher profile on SciRah