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M. Nishimoto · SciRah

Researcher profile · Semantic Scholar

M. Nishimoto

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M. Nishimoto — researcher profile on SciRah

h-index: 13
Works: 29
Citations: 787

Most-cited papers

ISRIB Blunts the Integrated Stress Response by Allosterically Antagonising the Inhibitory Effect of Phosphorylated eIF2 on eIF2B
A. Zyryanova, K. Kashiwagi, C. Rato, H. Harding +8 more
2020bioRxiv174 citations Open access
Semantic Scholar
Structural basis for eIF2B inhibition in integrated stress response
K. Kashiwagi, T. Yokoyama, M. Nishimoto, Mari Takahashi +4 more
2018Science117 citations Open access
Semantic Scholar
Crystal structure of eukaryotic translation initiation factor 2B
K. Kashiwagi, Mari Takahashi, M. Nishimoto, T. Hiyama +5 more
2016Nature103 citations
Semantic Scholar
Phosphorylation analysis of 90 kDa heat shock protein within the cytosolic arylhydrocarbon receptor complex.
Hideo Ogiso, N. Kagi, E. Matsumoto, M. Nishimoto +5 more
2004Biochemistry91 citations
Semantic Scholar
HCV IRES Captures an Actively Translating 80S Ribosome.
T. Yokoyama, K. Machida, W. Iwasaki, T. Shigeta +10 more
2019Molecules and Cells48 citations Open access
Semantic Scholar
eIF2B-capturing viral protein NSs suppresses the integrated stress response
K. Kashiwagi, Yuichi Shichino, Tatsuya Osaki, A. Sakamoto +7 more
2021Nature Communications34 citations Open access
Semantic Scholar
Crystal structure of tRNA N2,N2-guanosine dimethyltransferase Trm1 from Pyrococcus horikoshii.
Ihsanawati, M. Nishimoto, K. Higashijima, M. Shirouzu +3 more
2008Journal of Molecular Biology33 citations
Semantic Scholar
Dual Transcriptional Control of amfTSBA, Which Regulates the Onset of Cellular Differentiation in Streptomyces griseus
K. Ueda, H. Takano, M. Nishimoto, Hiromi Inaba +1 more
2005Journal of Bacteriology28 citations Open access
Semantic Scholar
Crystal structure and mutational study of a unique SpoU family archaeal methylase that forms 2'-O-methylcytidine at position 56 of tRNA.
M. Kuratani, Y. Bessho, M. Nishimoto, H. Grosjean +1 more
2008Journal of Molecular Biology24 citations
Semantic Scholar
Crystal structure and RNA-binding analysis of the archaeal transcription factor NusA.
Rie Shibata, Y. Bessho, A. Shinkai, M. Nishimoto +4 more
2007Biochemical and Biophysical Research Communications - BBRC21 citations
Semantic Scholar
A parasitic fungus employs mutated eIF4A to survive on rocaglate-synthesizing Aglaia plants
Mingming Chen, Naoyoshi Kumakura, Hironori Saito, Ryan Muller +8 more
2022bioRxiv17 citations Open access
Semantic Scholar
Crystal structure of Methanocaldococcus jannaschii Trm4 complexed with sinefungin.
M. Kuratani, M. Hirano, S. Goto-Ito, Y. Itoh +7 more
2010Journal of Molecular Biology16 citations
Semantic Scholar
Characterization and Structure of the Aquifex aeolicus Protein DUF752
A. Kitamura, M. Nishimoto, T. Sengoku, Rie Shibata +5 more
2012Journal of Biological Chemistry13 citations Open access
Semantic Scholar
Crystal structure of MqnD (TTHA1568), a menaquinone biosynthetic enzyme from Thermus thermophilus HB8.
R. Arai, K. Murayama, Tomomi Uchikubo-Kamo, M. Nishimoto +5 more
2009Journal of Structural Biology12 citations
Semantic Scholar
Crystal structure of the bifunctional tRNA modification enzyme MnmC from Escherichia coli
A. Kitamura, T. Sengoku, M. Nishimoto, S. Yokoyama +1 more
2011Protein Science11 citations Open access
Semantic Scholar
Crystal Structure of the tRNA Pseudouridine Synthase TruA from Thermus Thermophilus HB8
Xue-Song Dong, Y. Bessho, Rie Shibata, M. Nishimoto +3 more
2006RNA Biology11 citations Open access
Semantic Scholar
Boric acid intercepts 80S ribosome migration from AUG-stop by stabilizing eRF1
Mayuki Tanaka, T. Yokoyama, Hironori Saito, M. Nishimoto +7 more
2024Nature Chemical Biology8 citations
Semantic Scholar
Crystal structure of a predicted phosphoribosyltransferase (TT1426) from Thermus thermophilus HB8 at 2.01 Å resolution
M. Kukimoto-Niino, Rie Shibata, K. Murayama, H. Hamana +6 more
2005Protein Science8 citations Open access
Semantic Scholar
Carbon-source-dependent transcriptional control involved in the initiation of cellular differentiation in Streptomyces griseus
K. Ueda, Kouki Endo, H. Takano, M. Nishimoto +4 more
2000Antonie van Leeuwenhoek8 citations
Semantic Scholar
Structural insights into the role of eIF3 in translation mediated by the HCV IRES
Wakana Iwasaki, K. Kashiwagi, Ayako Sakamoto, M. Nishimoto +8 more
2025Proceedings of the National Academy of Sciences of the United States of America4 citations Open access
Semantic Scholar
Characterization and structure of the Aquifex aeolicus protein DUF752: a bacterial tRNA-methyltransferase (MnmC2) functioning without the usually fused oxidase domain (MnmC1)
A. Kitamura, M. Nishimoto, T. Sengoku, Rie Shibata +5 more
20123 citations
Semantic Scholar
Conserved protein TTHA1554 from Thermus thermophilus HB8 binds to glutamine synthetase and cystathionine beta-lyase.
R. Arai, M. Nishimoto, M. Toyama, T. Terada +3 more
2005Biochimica et Biophysica Acta3 citations
Semantic Scholar
Characterization of RNA aptamers against SRP19 protein having sequences different from SRP RNA.
Y. Haraguchi, Kanako Kuwasako, Y. Muto, Y. Bessho +5 more
2009Nucleic Acids Symposium Series1 citations Open access
Semantic Scholar
Crystal Structure of UDP-glucose 4-epimerase from Bifidobacterium longum in complex with NAD+ and UDP-Glc
Y. Nam, M. Nishimoto, T. Arakawa, M. Kitaoka +1 more
20190 citations
Semantic Scholar
Crystal Structure of UDP-glucose 4-epimerase from Bifidobacterium longum in complex with NAD+ and UDP-GlcNAc
Y. Nam, M. Nishimoto, T. Arakawa, M. Kitaoka +1 more
20190 citations
Semantic Scholar
Bifunctional tRNA modification enzyme MnmC from Escherichia coli
A. Kitamura, T. Sengoku, M. Nishimoto, S. Yokoyama +1 more
20110 citations
Semantic Scholar
Crystal structure of a conserved hypothetical protein TTHA1568 from Thermus thermophilus HB8
R. Arai, A. Nishino, K. Nagano, T. Kamo-Uchikubo +7 more
20060 citations
Semantic Scholar
Crystal structure of MqnD (TTHA1568), a menaquinone biosynthetic enzyme from Thermus thermophilus HB8 (Cys11 modified with beta-mercaptoethanol)
R. Arai, A. Nishino, K. Nagano, T. Kamo-Uchikubo +7 more
20060 citations
Semantic Scholar
1P201 Analysis of Aquifex MnmC2 tRNA modification enzyme for two codon set of genetic code.(7. Nucleic acid binding protein,Poster Session,Abstract,Meeting Program of EABS & BSJ 2006)
M. Nishimoto, Rie Shibata, Emiko Fusatomi, T. Terada +3 more
20060 citations Open access
Semantic Scholar

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