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Jeremie Vendome · SciRah

Researcher profile · Semantic Scholar

Jeremie Vendome

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Jeremie Vendome — researcher profile on SciRah

h-index: 24
Works: 51
Citations: 2,772

Most-cited papers

The extracellular architecture of adherens junctions revealed by crystal structures of type I cadherins
O. Harrison, Xiang-Shu Jin, Soonjin Hong, Fabiana A. Bahna +12 more
2011Structure395 citations Open access
Semantic Scholar
Linking molecular affinity and cellular specificity in cadherin-mediated adhesion
Phinikoula S. Katsamba, K. Carroll, G. Ahlsen, Fabiana A. Bahna +8 more
2009Proceedings of the National Academy of Sciences of the United States of America254 citations Open access
Semantic Scholar
Two-step adhesive binding by classical cadherins
O. Harrison, Fabiana A. Bahna, Phinikoula S. Katsamba, Xiang-Shu Jin +7 more
2010Nature Structural &Molecular Biology208 citations Open access
Semantic Scholar
Structure and Drug Resistance of the Plasmodium falciparum Transporter PfCRT
Jonathan Kim, Yong-Zi Tan, K. Wicht, S. Erramilli +14 more
2019Nature177 citations Open access
Semantic Scholar
T-cadherin structures reveal a novel adhesive binding mechanism
C. Ciatto, Fabiana A. Bahna, N. Zampieri, H. VanSteenhouse +11 more
2010Nature Structural &Molecular Biology137 citations Open access
Semantic Scholar
The mechanism of patellamide macrocyclization revealed by the characterization of the PatG macrocyclase domain
J. Koehnke, A. Bent, W. Houssen, D. Zollman +9 more
2012Nature Structural &Molecular Biology132 citations Open access
Semantic Scholar
Transforming binding affinities from 3D to 2D with application to cadherin clustering
Yinghao Wu, Jeremie Vendome, L. Shapiro, A. Ben-Shaul +1 more
2011Nature126 citations Open access
Semantic Scholar
Nectin ectodomain structures reveal a canonical adhesive interface
O. Harrison, Jeremie Vendome, J. Brasch, Xiang-Shu Jin +7 more
2012Nature Structural &Molecular Biology121 citations Open access
Semantic Scholar
Molecular design principles underlying β-strand swapping in the adhesive dimerization of cadherins
Jeremie Vendome, Shoshana L. Posy, Xiang-Shu Jin, Fabiana A. Bahna +3 more
2011Nature Structural &Molecular Biology117 citations Open access
Semantic Scholar
Structures of aminoarabinose transferase ArnT suggest a molecular basis for lipid A glycosylation
V. Petrou, Carmen M. Herrera, Kathryn M. Schultz, O. Clarke +12 more
2016Science110 citations Open access
Semantic Scholar
Enhancing Hit Discovery in Virtual Screening through Absolute Protein-Ligand Binding Free-Energy Calculations
Wei Chen, Di Cui, Steven V. Jerome, M. Michino +7 more
2023Journal of Chemical Information and Modeling101 citations Open access
Semantic Scholar
Silencing c-Myc translation as a therapeutic strategy through targeting PI3Kδ and CK1ε in hematological malignancies.
Chang-Chun Deng, Mark R. Lipstein, L. Scotto, Xavier O. Jirau Serrano +14 more
2017Blood94 citations Open access
Semantic Scholar
Splice form-dependence of β-neurexin/neuroligin binding interactions
J. Koehnke, Phinikoula S. Katsamba, G. Ahlsen, Fabiana A. Bahna +4 more
2010Neuron94 citations Open access
Semantic Scholar
Antimalarial proteasome inhibitor reveals collateral sensitivity from intersubunit interactions and fitness cost of resistance
L. Kirkman, Wen-Hu Zhan, Joseph E. Visone, A. Dziedziech +30 more
2018Proceedings of the National Academy of Sciences of the United States of America86 citations Open access
Semantic Scholar
Structural and energetic determinants of adhesive binding specificity in type I cadherins
Jeremie Vendome, K. Felsovalyi, Hang Song, Zhongyu Yang +11 more
2014Proceedings of the National Academy of Sciences of the United States of America86 citations Open access
Semantic Scholar
Loop L5 Acts as a Conformational Latch in the Mitotic Kinesin Eg5*
William M. Behnke-Parks, Jeremie Vendome, B. Honig, Z. Maliga +2 more
2010Journal of Biological Chemistry57 citations Open access
Semantic Scholar
Identification of a Novel 1,2,3,4-Tetrahydrobenzo[b][1,6]naphthyridine Analogue as a Potent Phosphodiesterase 5 Inhibitor with Improved Aqueous Solubility for the Treatment of Alzheimer’s Disease
J. Fiorito, Jeremie Vendome, F. Saeed, Agnieszka Staniszewski +5 more
2017Journal of Medicinal Chemistry50 citations Open access
Semantic Scholar
Crystal structures of Drosophila N-cadherin ectodomain regions reveal a widely used class of Ca2+-free interdomain linkers
Xiang-Shu Jin, M. Walker, Klára Felsövályi, Jeremie Vendome +6 more
2011Proceedings of the National Academy of Sciences of the United States of America44 citations Open access
Semantic Scholar
The Discovery of New Cyanobactins from Cyanothece PCC 7425 Defines a New Signature for Processing of Patellamides
W. Houssen, J. Koehnke, D. Zollman, Jeremie Vendome +4 more
2012ChemBioChem40 citations
Semantic Scholar
Development of a highly selective Plasmodium falciparum proteasome inhibitor with anti-malaria activity in humanized mice
Wen-Hu Zhan, Hao Zhang, J. Ginn, Annie Leung +22 more
2021Angewandte Chemie39 citations Open access
Semantic Scholar
Molecular modeling of wild-type and D816V c-Kit inhibition based on ATP-competitive binding of ellipticine derivatives to tyrosine kinases.
Jeremie Vendome, S. Letard, F. Martin, F. Svinarchuk +3 more
2005Journal of Medicinal Chemistry36 citations Open access
Semantic Scholar
Induced-Fit Docking Enables Accurate Free Energy Perturbation Calculations in Homology Models.
Tianchuan Xu, Kai Zhu, Alexandre Beautrait, Jeremie Vendome +4 more
2022Journal of Chemical Theory and Computation34 citations Open access
Semantic Scholar
Silencing c-Myc Translation As a Therapeutic Strategy through Targeting PI3K Delta and CK1 Epsilon in Hematological Malignancies
Chang-Chun Deng, Mark R. Lipstein, L. Scotto, Xavier O. Jirau Serrano +13 more
201634 citations
Semantic Scholar
Evidence for the early emergence of piperaquine-resistant Plasmodium falciparum malaria and modeling strategies to mitigate resistance
Jennifer L. Small-Saunders, Laura M. Hagenah, K. Wicht, S. K. Dhingra +10 more
2022PLoS Pathogens32 citations Open access
Semantic Scholar
AI meets physics in computational structure-based drug discovery for GPCRs
M. Michino, Jeremie Vendome, Irina Kufareva
2025npj Drug Discovery21 citations Open access
Semantic Scholar
Identification of a Mycothiol-Dependent Nitroreductase from Mycobacterium tuberculosis
A. Negri, P. Javidnia, R. Mu, Xiaojie Zhang +20 more
2018ACS Infectious Diseases21 citations Open access
Semantic Scholar
Macrocyclic peptides that selectively inhibit the Mycobacterium tuberculosis proteasome
Hao Zhang, Hao-Chi Hsu, Shoshanna C. Kahne, Ryoma Hara +23 more
2021Journal of Medicinal Chemistry20 citations Open access
Semantic Scholar
Shape-Based Virtual Screening of a Billion-Compound Library Identifies Mycobacterial Lipoamide Dehydrogenase Inhibitors
M. Michino, Alexandre Beautrait, Nicholas A. Boyles, A. Nadupalli +9 more
2023ACS Bio & Med Chem Au19 citations Open access
Semantic Scholar
In Vitro and In Vivo Inhibition of the Mycobacterium tuberculosis Phosphopantetheinyl Transferase PptT by Amidinoureas
Samantha Ottavi, Sarah M. Scarry, J. Mosior, Y. Ling +19 more
2022Journal of Medicinal Chemistry19 citations Open access
Semantic Scholar
Design, synthesis, and optimization of macrocyclic peptides as species-selective antimalaria proteasome inhibitors
Hao Zhang, J. Ginn, Wen-Hu Zhan, Y. J. Liu +16 more
2022Journal of Medicinal Chemistry18 citations Open access
Semantic Scholar
Structure and Substrate Recognition of the Bottromycin Maturation Enzyme BotP
G. Mann, Liujie Huo, S. Adam, Brunello Nardone +4 more
2016ChemBioChem13 citations Open access
Semantic Scholar
Structure-Activity Relationship Studies of Antimalarial Plasmodium Proteasome Inhibitors─Part II.
Hao Zhang, J. Ginn, Wen-Hu Zhan, Annie Leung +22 more
2023Journal of Medicinal Chemistry11 citations Open access
Semantic Scholar
Lead Optimization of Small Molecule ENL YEATS Inhibitors to Enable In Vivo Studies: Discovery of TDI-11055.
M. Michino, Tanweer A. Khan, Michael Miller, Yoshiyuki Fukase +12 more
2024ACS Medicinal Chemistry Letters9 citations Open access
Semantic Scholar
Characterization of Biochemical Properties of Bacillus subtilis RecQ Helicase
Wei Qin, Na-Nv Liu, Li-Jun Wang, Min Zhou +7 more
2014Journal of Bacteriology9 citations Open access
Semantic Scholar
Structure and Drug Resistance of the Plasmodium Falciparum Transporter PfCRT
Jonathan S Kim, Yong-Zi Tan, K. Wicht, S. Erramilli +11 more
2020Biophysical Journal7 citations Open access
Semantic Scholar
Loop L 5 Acts as a Conformational Latch in the Mitotic Kinesin
William M. Behnke-Parks, Jeremie Vendome, B. Honig, Z. Maliga +2 more
20113 citations
Semantic Scholar
Conformational Preference Classification of Integrin-Binding Ligands Using Free Energy Perturbation
Martin Vögele, Rezvan Shahoei, L. Petridis, Jing Li +4 more
2026bioRxiv1 citations Open access
Semantic Scholar
Fine sampling of sequence space for membrane protein structural biology
Michael Loukeris, Z. A. Sanghai, Jeremie Vendome, W. Hendrickson +2 more
2021Journal of Molecular Biology1 citations Open access
Semantic Scholar
Cover Picture: The Discovery of New Cyanobactins fromCyanothecePCC 7425 Defines a New Signature for Processing of Patellamides (ChemBioChem 18/2012)
W. Houssen, J. Koehnke, D. Zollman, Jeremie Vendome +4 more
2012ChemBioChem1 citations Open access
Semantic Scholar
ArnT: Structure and Mechanism of the Aminoarabinose Transferase Responsible for Resistance to Polymyxin-Class Antibiotics
V. Petrou, Carmen M. Herrera, Kathryn M. Schultz, O. Clarke +11 more
20160 citations Open access
Semantic Scholar
Silencing c-Myc Translation as a Therapeutic Strategy through Targeting PI 3 K Delta and CK 1 Epsilon in Hematological Malignancies Short title : Targeting PI 3 K and CK 1 in Myc Driven Lymphoma
Chang-Chun Deng, Mark R. Lipstein, L. Scotto, Xavier O. Jirau Serrano +17 more
20160 citations
Semantic Scholar
Title Silencing c-Myc translation as a therapeutic strategy through targeting PI 3 K delta and CK 1 epsilon in hematological malignancies
Chang-Chun Deng, Mark R. Lipstein, L. Scotto, Xavier O. Jirau Serrano +14 more
20160 citations
Semantic Scholar
Targeting NF-κB with First in Class N-Quinoline Benzenesulfonamides (NQBS) Reveals Potent Activity in Models of Diffuse Large B-Cell Lymphoma (DLBCL)
M. Kalac, M. Mangone, A. Rinderspacher, Shi-Xian Deng +6 more
20150 citations
Semantic Scholar
PatG macrocyclase in complex with peptide
J. Koehnke, A. Bent, W. Houssen, D. Zollman +9 more
20120 citations
Semantic Scholar
PatG macrocyclase domain
J. Koehnke, A. Bent, W. Houssen, D. Zollman +9 more
20120 citations
Semantic Scholar
Structure of self-cleaved protease domain of PatA
J. Koehnke, D. Zollman, Jeremie Vendome, A. Raab +4 more
20120 citations
Semantic Scholar
Structure of S218A mutant of the protease domain of PatA
J. Koehnke, D. Zollman, Jeremie Vendome, A. Raab +4 more
20120 citations
Semantic Scholar
, the Mitotic Kinesin Eg 5 Loop L 5 Acts as a Conformational Latch in Protein Structure and Folding
William M. Behnke-Parks, Jeremie Vendome, B. Honig, Z. Maliga +2 more
20110 citations
Semantic Scholar
MOLECULAR MODEL OF MUTATED D816V HUMAN C-KIT KINASE DOMAIN
Jeremie Vendome, M. Le Bret
20040 citations
Semantic Scholar
INACTIVE WILD TYPE HUMAN C-KIT KINASE DOMAIN MOLECULAR MODEL
Jeremie Vendome, M. Le Bret
20040 citations
Semantic Scholar

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