Z. Yaniv

Most-cited papers

SimpleITK Image-Analysis Notebooks: a Collaborative Environment for Education and Reproducible Research
Z. Yaniv, Bradley C. Lowekamp, H. Johnson, R. Beare
2017Journal of digital imaging489 citations Open access
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OpenIGTLink: an open network protocol for image-guided therapy environment
J. Tokuda, Gregory S. Fischer, X. Papademetris, Z. Yaniv +12 more
2009The international journal of medical robotics + computer assisted surgery : MRCAS373 citations Open access
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Image Segmentation, Registration and Characterization in R with SimpleITK
R. Beare, Bradley C. Lowekamp, Z. Yaniv
2018Journal of Statistical Software269 citations Open access
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Gradient-based 2-D/3-D rigid registration of fluoroscopic X-ray to CT
H. Livyatan, Z. Yaniv, Leo Joskowicz
2003IEEE Transactions on Medical Imaging204 citations Open access
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IBEX: A versatile multiplex optical imaging approach for deep phenotyping and spatial analysis of cells in complex tissues
Andrea J. Radtke, Evelyn Kandov, Bradley C. Lowekamp, Emily Speranza +12 more
2020Proceedings of the National Academy of Sciences of the United States of America189 citations Open access
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Electromagnetic tracking in the clinical environment.
Z. Yaniv, Emmanuel Wilson, D. Lindisch, K. Cleary
2009Medical Physics (Lancaster)177 citations Open access
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PD-1 blockade exacerbates Mycobacterium tuberculosis infection in rhesus macaques
Keith D. Kauffman, Shunsuke Sakai, N. Lora, S. Namasivayam +18 more
2020Science immunology132 citations Open access
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IBEX: an iterative immunolabeling and chemical bleaching method for high-content imaging of diverse tissues
Andrea J. Radtke, Colin J. Chu, Z. Yaniv, L. Yao +13 more
2022Nature Protocols118 citations Open access
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Precision targeting of liver lesions using a novel electromagnetic navigation device in physiologic phantom and swine.
F. Banovac, Jonathan Tang, Sheng Xu, D. Lindisch +7 more
2005Medical Physics (Lancaster)90 citations
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Which pivot calibration?
Z. Yaniv
2015Medical Imaging79 citations
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Treatment Planning and Image Guidance for Radiofrequency Ablations of Large Tumors
Hongliang Ren, E. Campos-Náñez, Z. Yaniv, F. Banovac +3 more
2013IEEE journal of biomedical and health informatics77 citations Open access
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A distance map regularized CNN for cardiac cine MR image segmentation
Shusil Dangi, C. Linte, Z. Yaniv
2019Medical Physics (Lancaster)75 citations Open access
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Precise robot-assisted guide positioning for distal locking of intramedullary nails
Z. Yaniv, Leo Joskowicz
2005IEEE Transactions on Medical Imaging74 citations
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Image-Guided Procedures : A Review
Z. Yaniv, K. Cleary
200666 citations
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Agile Methods for Open Source Safety-Critical Software
K. Gary, A. Enquobahrie, Luis Ibáñez, Patrick Cheng +5 more
2011Software, Practice & Experience62 citations Open access
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Needle-Based Interventions With the Image-Guided Surgery Toolkit (IGSTK): From Phantoms to Clinical Trials
Z. Yaniv, Patrick Cheng, Emmanuel Wilson, Po-Pa Teo +6 more
2010IEEE Transactions on Biomedical Engineering57 citations
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A hardware and software protocol for the evaluation of electromagnetic tracker accuracy in the clinical environment: a multi-center study
Emmanuel Wilson, Z. Yaniv, Hui Zhang, C. Nafis +6 more
2007SPIE Medical Imaging54 citations
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Monitoring Patient Respiration using a Single Optical Camera
Stefan Wiesner, Z. Yaniv
2007Annual International Conference of the IEEE Engineering in Medicine and Biology Society44 citations
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The National Library of Medicine Pill Image Recognition Challenge: An Initial Report
Z. Yaniv, Jessica S. Faruque, Sally Howe, K. Dunn +6 more
2016International Conference on Artificial Intelligence and Pattern Recognition42 citations Open access
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Mixed and Augmented Reality in Medicine
T. Peters, C. Linte, Z. Yaniv, Jacqueline Williams
201840 citations
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Random Sample Consensus (RANSAC) Algorithm, A Generic Implementation
Z. Yaniv
2010The insight journal40 citations Open access
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Designing Tracking Software for Image-Guided Surgery Applications: IGSTK Experience
A. Enquobahrie, D. Gobbi, Matt Turek, Patrick Cheng +3 more
2008International Journal of Computer Assisted Radiology and Surgery31 citations Open access
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Differentiating between drug-sensitive and drug-resistant tuberculosis with machine learning for clinical and radiological features.
Feng Yang, Hang Yu, Karthik Kantipudi, Manohar Karki +5 more
2021Quantitative Imaging in Medicine and Surgery30 citations Open access
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Generalization Challenges in Drug-Resistant Tuberculosis Detection from Chest X-rays
Manohar Karki, Karthik Kantipudi, Feng Yang, Hang Yu +3 more
2022Diagnostics26 citations Open access
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Left Ventricle Segmentation and Quantification from Cardiac Cine MR Images via Multi-task Learning
Shusil Dangi, Z. Yaniv, C. Linte
2018STACOM@MICCAI24 citations Open access
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Registration for Orthopaedic Interventions
Z. Yaniv
201624 citations
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Gradient-Based 2D/3D Rigid Registration of Fluoroscopic X-ray to CT
H. Livyatan, Z. Yaniv, Leo Joskowicz
2003IEEE Trans. Medical Imaging21 citations
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Localizing spherical fiducials in C-arm based cone-beam CT.
Z. Yaniv
2009Medical Physics (Lancaster)19 citations
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A cost effective and high fidelity fluoroscopy simulator using the Image-Guided Surgery Toolkit (IGSTK)
Ren-Hui Gong, Brad Jenkins, R. Sze, Z. Yaniv
2014Medical Imaging18 citations
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Interactive initialization of 2D/3D rigid registration.
Ren-Hui Gong, Ö. Güler, Mustafa Kürklüoglu, J. Lovejoy +1 more
2013Medical Physics (Lancaster)18 citations
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A buyer's guide to electromagnetic tracking systems for clinical applications
Emmanuel Wilson, Z. Yaniv, D. Lindisch, K. Cleary
2008SPIE Medical Imaging18 citations
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Ultrasound calibration framework for the image-guided surgery toolkit (IGSTK)
Z. Yaniv, P. Foroughi, Hyun-jae Kang, E. Boctor
2011Medical Imaging16 citations
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Quantitative CT for volumetric analysis of medical images: initial results for liver tumors
A. Behnaz, J. Snider, Eneh Chibuzor, G. Esposito +4 more
2010Medical Imaging15 citations
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A robot-assisted system for long bone intramedullary distal locking: concept and preliminary results
Leo Joskowicz, C. Milgrom, M. Shoham, Z. Yaniv +1 more
2003Computer Assisted Radiology and Surgery - International Congress and Exhibition15 citations
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Cine Cardiac MRI Slice Misalignment Correction Towards Full 3D Left Ventricle Segmentation
Shusil Dangi, C. Linte, Z. Yaniv
2018Medical Imaging13 citations Open access
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Correction to: SimpleITK Image-Analysis Notebooks: a Collaborative Environment for Education and Reproducible Research
Z. Yaniv, Bradley C. Lowekamp, H. Johnson, R. Beare
2019Journal of digital imaging12 citations Open access
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Image-guided navigation: A cost effective practical introduction using the image-guided surgery toolkit (IGSTK)
Ozgur Guler, Z. Yaniv
2012Annual International Conference of the IEEE Engineering in Medicine and Biology Society12 citations
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Fluoroscopy based accuracy assessment of electromagnetic tracking
Z. Yaniv, K. Cleary
2006SPIE Medical Imaging11 citations
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Identifying Drug-Resistant Tuberculosis in Chest Radiographs: Evaluation of CNN Architectures and Training Strategies
Manohar Karki, Karthik Kantipudi, Hang Yu, Feng Yang +3 more
2021Annual International Conference of the IEEE Engineering in Medicine and Biology Society10 citations Open access
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Respiratory signal generation for retrospective gating of cone-beam CT images
Stefan Wiesner, Z. Yaniv
2008SPIE Medical Imaging10 citations
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A Multi-scale, Multiomic Atlas of Human Normal and Follicular Lymphoma Lymph Nodes
Andrea J. Radtke, E. Postovalova, Arina Varlamova, A. Bagaev +34 more
2022bioRxiv9 citations Open access
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Evaluation of spherical fiducial localization in C-arm cone-beam CT using patient data.
Z. Yaniv
2010Medical Physics (Lancaster)9 citations
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Dual-view light-sheet imaging through tilted glass interface using a deformable mirror
Nikita Vladimirov, Friedrich Preusser, Jan Wisniewski, Z. Yaniv +3 more
2020bioRxiv8 citations Open access
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Cost Effective Simulation
Z. Yaniv, Ö. Güler, Ren-Hui Gong
2018Mixed and Augmented Reality in Medicine8 citations
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Applications of Augmented Reality in the Operating Room
Z. Yaniv, C. Linte
20158 citations
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Augmented Environments for Computer-Assisted Interventions
C. Linte, Z. Yaniv, P. Fallavollita, P. Abolmaesumi +1 more
2014Lecture Notes in Computer Science8 citations
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Towards a Clinical Stereoscopic Augmented Reality System for Laparoscopic Surgery
X. Kang, Jihun Oh, Emmanuel Wilson, Z. Yaniv +3 more
2013Clip8 citations
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Agile Methods for Safety-Critical Open Source Software
K. Gary, Shylaja Kokoori, B. Muffih, A. Enquobahrie +3 more
20118 citations
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DicomAnnotator: a Configurable Open-Source Software Program for Efficient DICOM Image Annotation
Q. Dong, G. Luo, D. Haynor, M. O'Reilly +4 more
2020Journal of digital imaging7 citations Open access
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Interfacing proprietary hardware with the image-guided surgery toolkit (IGSTK): a case for the OpenIGTLink protocol
S. Ordas, Z. Yaniv, Patrick Cheng, J. Tokuda +3 more
2009Medical Imaging7 citations
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