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J. Krijgsveld · SciRah

Researcher profile · Semantic Scholar

J. Krijgsveld

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J. Krijgsveld — researcher profile on SciRah

h-index: 69
Works: 228
Citations: 23K

Most-cited papers

Single-pot, solid-phase-enhanced sample preparation for proteomics experiments
Christopher S. Hughes, S. Moggridge, T. Müller, Poul H. Sorensen +2 more
2018Nature Protocols1,712 citations
Semantic Scholar
Comprehensive Identification of RNA-Binding Domains in Human Cells
Alfredo Castello, B. Fischer, C. Frese, R. Horos +5 more
2016Molecules and Cells614 citations Open access
Semantic Scholar
The Human RNA-Binding Proteome and Its Dynamics during Translational Arrest.
Jakob Trendel, T. Schwarzl, R. Horos, Ananth Prakash +3 more
2019Cell370 citations Open access
Semantic Scholar
SWI/SNF as mechanoregulated inhibitor of YAP/TAZ
L. Chang, L. Azzolin, D. Di Biagio, F. Zanconato +12 more
2018Nature289 citations Open access
Semantic Scholar
Transcriptional addiction in cancer cells is mediated by YAP/TAZ through BRD4
F. Zanconato, G. Battilana, M. Forcato, Letizia Filippi +13 more
2018Nature Medicine283 citations Open access
Semantic Scholar
Automated sample preparation with SP3 for low‐input clinical proteomics
T. Müller, Mathias Kalxdorf, Rémi Longuespée, D. Kazdal +2 more
2019bioRxiv257 citations Open access
Semantic Scholar
Author Correction: BCAT1 restricts αKG levels in AML stem cells leading to IDHmut-like DNA hypermethylation
S. Raffel, M. Falcone, N. Kneisel, Jenny Hansson +30 more
2018Nature208 citations Open access
Semantic Scholar
Human Mast Cell Proteome Reveals Unique Lineage, Putative Functions, and Structural Basis for Cell Ablation.
Thomas Plum, Xi Wang, M. Rettel, J. Krijgsveld +2 more
2020Immunity163 citations Open access
Semantic Scholar
Global changes of the RNA-bound proteome during the maternal-to-zygotic transition in Drosophila
Vasiliy O. Sysoev, B. Fischer, C. Frese, Ishaan Gupta +4 more
2016Nature Communications158 citations Open access
Semantic Scholar
BCAT1 restricts αKG levels in AML stem cells leading to IDHmut-like DNA hypermethylation
S. Raffel, M. Falcone, N. Kneisel, Jenny Hansson +30 more
2017Nature132 citations
Semantic Scholar
EZHIP / CXorf67 mimics K27M mutated oncohistones and functions as an intrinsic inhibitor of PRC2 function in aggressive posterior fossa ependymoma.
Jens-Martin Hübner, T. Müller, Dimitris N. Papageorgiou, M. Mauermann +6 more
2019Neuro-Oncology130 citations Open access
Semantic Scholar
Rapid Cue-Specific Remodeling of the Nascent Axonal Proteome
Roberta Cagnetta, C. Frese, Toshiaki Shigeoka, J. Krijgsveld +1 more
2018Neuron125 citations Open access
Semantic Scholar
Bifunctional Sphingosine for Cell-Based Analysis of Protein-Sphingolipid Interactions.
P. Haberkant, F. Stein, D. Höglinger, M. Gerl +5 more
2016ACS Chemical Biology113 citations Open access
Semantic Scholar
Expanding the Circuitry of Pluripotency by Selective Isolation of Chromatin-Associated Proteins
Mahmoud-Reza Rafiee, C. Girardot, Gianluca Sigismondo, J. Krijgsveld
2016Molecules and Cells103 citations Open access
Semantic Scholar
Venetoclax synergizes with Gilteritinib in FLT3 wildtype high-risk Acute Myeloid Leukemia by suppressing MCL-1.
M. Janssen, Christina Schmidt, P. Bruch, M. Blank +32 more
2022Blood98 citations Open access
Semantic Scholar
Identification of RNA-binding Proteins in Macrophages by Interactome Capture*
Anke Liepelt, I. Naarmann-de Vries, Nadine Simons, Katrin Eichelbaum +10 more
2016Molecular & Cellular Proteomics87 citations Open access
Semantic Scholar
Noncanonical Modulation of the eIF2 Pathway Controls an Increase in Local Translation during Neural Wiring
Roberta Cagnetta, H. Wong, C. Frese, G. Mallucci +2 more
2019Molecules and Cells81 citations Open access
Semantic Scholar
The RNA-Binding Protein YBX3 Controls Amino Acid Levels by Regulating SLC mRNA Abundance.
A. Cooke, T. Schwarzl, Ina Huppertz, G. Kramer +5 more
2019Cell Reports77 citations Open access
Semantic Scholar
Site-specific methylation of 18S ribosomal RNA by SNORD42A is required for Acute Myeloid Leukemia cell proliferation.
C. Pauli, Yi Liu, C. Rohde, Chunhong Cui +10 more
2020Blood75 citations
Semantic Scholar
Quantitative proteomics reveals specific metabolic features of Acute Myeloid Leukemia stem cells.
S. Raffel, Daniel Klimmeck, M. Falcone, Aykut Demir +17 more
2020Blood74 citations
Semantic Scholar
Spatial Tissue Proteomics Quantifies Inter- and Intratumor Heterogeneity in Hepatocellular Carcinoma (HCC)
Katarzyna Buczak, A. Ori, Joanna M. Kirkpatrick, K. Holzer +11 more
2018Molecular & Cellular Proteomics69 citations Open access
Semantic Scholar
Temporal multi-omics identifies LRG1 as a vascular niche instructor of metastasis
M. Singhal, N. Gengenbacher, Ashik Ahmed Abdul Pari, Miki Kamiyama +20 more
2021Science Translational Medicine65 citations Open access
Semantic Scholar
Secretome Analysis of Cardiomyocytes Identifies PCSK6 (Proprotein Convertase Subtilisin/Kexin Type 6) as a Novel Player in Cardiac Remodeling After Myocardial Infarction
T. Kuhn, J. Knobel, Sonja Burkert-Rettenmaier, Xue Li +9 more
2020Circulation64 citations Open access
Semantic Scholar
Protease‐resistant streptavidin for interaction proteomics
Mahmoud-Reza Rafiee, Gianluca Sigismondo, Mathias Kalxdorf, Laura Förster +3 more
2020Molecular Systems Biology61 citations Open access
Semantic Scholar
The long non-coding RNA LINC00152 is essential for cell cycle progression through mitosis in HeLa cells
Linda Nötzold, Lukas Frank, Minakshi Gandhi, M. Polycarpou-Schwarz +13 more
2017Scientific Reports59 citations Open access
Semantic Scholar
Comprehensive Identification of RNA-Binding Proteins by RNA Interactome Capture.
Alfredo Castello, R. Horos, Claudia Strein, B. Fischer +4 more
2016Methods in molecular biology58 citations
Semantic Scholar
Comparative Secretome Analyses of Primary Murine White and Brown Adipocytes Reveal Novel Adipokines*
A. Ali Khan, Jenny Hansson, Peter Weber, Sophia Foehr +3 more
2018Molecular & Cellular Proteomics53 citations Open access
Semantic Scholar
An efficient and scalable pipeline for epitope tagging in mammalian stem cells using Cas9 ribonucleoprotein
P. Dewari, Benjamin Southgate, Katrina McCarten, German Monogarov +16 more
2018bioRxiv53 citations Open access
Semantic Scholar
A Dynamic rRNA Ribomethylome Drives Stemness in Acute Myeloid Leukemia
Feng-Biao Zhou, Nesrine Aroua, Yi Liu, C. Rohde +22 more
2022Cancer Discovery52 citations Open access
Semantic Scholar
IceR improves proteome coverage and data completeness in global and single-cell proteomics
Mathias Kalxdorf, T. Müller, O. Stegle, J. Krijgsveld
2020Nature Communications52 citations Open access
Semantic Scholar
Specific inflammatory osteoclast precursors induced during chronic inflammation give rise to highly active osteoclasts associated with inflammatory bone loss
Y. Meirow, Milena M. Jovanović, Yuval Zur, J. Habib +13 more
2022Bone Research48 citations Open access
Semantic Scholar
Pre-analytical processing of plasma and serum samples for combined proteome and metabolome analysis
H. Gegner, Thomas Naake, Aurélien J. F. Dugourd, T. Müller +14 more
2022bioRxiv48 citations Open access
Semantic Scholar
Specific RNP capture with antisense LNA/DNA mixmers
Birgit Rogell, B. Fischer, M. Rettel, J. Krijgsveld +2 more
2017RNA: A publication of the RNA Society46 citations Open access
Semantic Scholar
Repression of Human Papillomavirus Oncogene Expression under Hypoxia Is Mediated by PI3K/mTORC2/AKT Signaling
Felicitas Bossler, Bianca J. Kuhn, Thomas Günther, S. Kraemer +12 more
2019mBio43 citations Open access
Semantic Scholar
Identification of RNA-binding domains of RNA-binding proteins in cultured cells on a system-wide scale with RBDmap
Alfredo Castello, C. Frese, B. Fischer, Aino I. Järvelin +6 more
2017Nature Protocols43 citations
Semantic Scholar
Proteome and secretome characterisation of glioblastoma-derived neural stem cells
Satoshi Okawa, Sladjana Gagrica, Carla Blin, Christine Ender +2 more
2016Stem Cells42 citations Open access
Semantic Scholar
Spatiotemporal proteomics uncovers cathepsin-dependent macrophage cell death during Salmonella infection
J. Selkrig, Nan Li, Annika Hausmann, M. Mangan +17 more
2020Nature Microbiology39 citations Open access
Semantic Scholar
Genomic Rewiring of SOX2 Chromatin Interaction Network during Differentiation of ESCs to Postmitotic Neurons
D. Bunina, Nade Abazova, Nichole S. Diaz, K. Noh +2 more
2020Cell Systems39 citations Open access
Semantic Scholar
SUMOylation regulates the protein network and chromatin accessibility at glucocorticoid receptor-binding sites
Ville Paakinaho, Joanna K. Lempiäinen, Gianluca Sigismondo, E. Niskanen +5 more
2021Nucleic Acids Research38 citations Open access
Semantic Scholar
Chromatin-directed proteomics-identified network of endogenous androgen receptor in prostate cancer cells
Kaisa Launonen, Ville Paakinaho, Gianluca Sigismondo, M. Malinen +7 more
2021Oncogene36 citations Open access
Semantic Scholar
Reduced chromatin binding of MYC is a key effect of HDAC inhibition in MYC amplified medulloblastoma.
J. Ecker, Venu Thatikonda, Gianluca Sigismondo, F. Selt +20 more
2020Neuro-Oncology34 citations Open access
Semantic Scholar
MYT1L haploinsufficiency in human neurons and mice causes autism-associated phenotypes that can be reversed by genetic and pharmacologic intervention
Bettina Weigel, Jana F. Tegethoff, Sarah D. Grieder, Bryce Lim +19 more
2023Molecular Psychiatry33 citations Open access
Semantic Scholar
Proteomic Analysis Reveals Branch-specific Regulation of the Unfolded Protein Response by Nonsense-mediated mRNA Decay*
Jana Sieber, Christian Hauer, Madhuri Bhuvanagiri, S. Leicht +4 more
2016Molecular & Cellular Proteomics32 citations Open access
Semantic Scholar
Organic phase separation opens up new opportunities to interrogate the RNA-binding proteome.
Tom S. Smith, E. Villanueva, R. Queiroz, Charlotte S. Dawson +6 more
2020Current Opinion in Chemical Biology31 citations Open access
Semantic Scholar
Association of circulating PLA2G7 levels with cancer cachexia and assessment of darapladib as a therapy
Pauline Morigny, Doris Kaltenecker, Julia Zuber, J. Machado +18 more
2021Journal of Cachexia, Sarcopenia and Muscle30 citations Open access
Semantic Scholar
BCAT1 redox function maintains mitotic fidelity.
Liliana Francois, Pavle Boskovic, Julian Knerr, Wei He +10 more
2023Cell Reports29 citations Open access
Semantic Scholar
Multi-level and lineage-specific interactomes of the Hox transcription factor Ubx contribute to its functional specificity
J. Carnesecchi, Gianluca Sigismondo, K. Domsch, C. Baader +3 more
2020Nature Communications26 citations Open access
Semantic Scholar
Identification of therapeutic targets of the hijacked super-enhancer complex in EVI1-rearranged leukemia
Sandra Kiehlmeier, Mahmoud-Reza Rafiee, Ali Bakr, Jagoda Mika +8 more
2021Leukemia25 citations Open access
Semantic Scholar
The ribosomal protein S6 kinase alpha-1 (RPS6KA1) induces resistance to venetoclax/azacitidine in acute myeloid leukemia
Katharina Weidenauer, Christina Schmidt, C. Rohde, C. Pauli +15 more
2023Leukemia23 citations Open access
Semantic Scholar
Effects of Metformin on the virus/host cell crosstalk in human papillomavirus‐positive cancer cells
K. Hoppe‐Seyler, Anja L Herrmann, Antonia Däschle, Bianca J. Kuhn +5 more
2021International Journal of Cancer23 citations Open access
Semantic Scholar

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