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N. Skrynnikov · SciRah

Researcher profile · Semantic Scholar

N. Skrynnikov

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N. Skrynnikov — researcher profile on SciRah

h-index: 34
Works: 113
Citations: 3,882

Most-cited papers

Slow dynamics in folded and unfolded states of an SH3 domain.
M. Tollinger, N. Skrynnikov, F. Mulder, J. Forman-Kay +1 more
2001Journal of the American Chemical Society458 citations
Semantic Scholar
Measurement of slow (micros-ms) time scale dynamics in protein side chains by (15)N relaxation dispersion NMR spectroscopy: application to Asn and Gln residues in a cavity mutant of T4 lysozyme.
F. A. A. Mulder, N. Skrynnikov, Bin Hon, F. Dahlquist +1 more
2001Journal of the American Chemical Society289 citations
Semantic Scholar
Reconstructing NMR spectra of "invisible" excited protein states using HSQC and HMQC experiments.
N. Skrynnikov, F. Dahlquist, L. Kay
2002Journal of the American Chemical Society180 citations
Semantic Scholar
Orienting domains in proteins using dipolar couplings measured by liquid-state NMR: differences in solution and crystal forms of maltodextrin binding protein loaded with beta-cyclodextrin.
N. Skrynnikov, Natalie K. Goto, Daiwen Yang, W. Choy +3 more
2000Journal of Molecular Biology166 citations
Semantic Scholar
Deuterium spin probes of side-chain dynamics in proteins. 1. Measurement of five relaxation rates per deuteron in (13)C-labeled and fractionally (2)H-enriched proteins in solution.
Ó. Millet, D. Muhandiram, N. Skrynnikov, L. Kay
2002Journal of the American Chemical Society164 citations
Semantic Scholar
Structural characterization of proteins with an attached ATCUN motif by paramagnetic relaxation enhancement NMR spectroscopy.
L. Donaldson, N. Skrynnikov, W. Choy, D. Ranjith Muhandiram +3 more
2001Journal of the American Chemical Society160 citations
Semantic Scholar
Probing slow time scale dynamics at methyl-containing side chains in proteins by relaxation dispersion NMR measurements: application to methionine residues in a cavity mutant of T4 lysozyme.
N. Skrynnikov, F. A. A. Mulder, Bin Hon, F. Dahlquist +1 more
2001Journal of the American Chemical Society152 citations
Semantic Scholar
Ligand-induced structural changes to maltodextrin-binding protein as studied by solution NMR spectroscopy.
J. Evenäs, V. Tugarinov, N. Skrynnikov, N. Goto +2 more
2001Journal of Molecular Biology135 citations
Semantic Scholar
Deuterium spin probes of side-chain dynamics in proteins. 2. Spectral density mapping and identification of nanosecond time-scale side-chain motions.
N. Skrynnikov, Ó. Millet, L. Kay
2002Journal of the American Chemical Society134 citations
Semantic Scholar
An NMR experiment for the accurate measurement of heteronuclear spin-lock relaxation rates.
D. Korzhnev, N. Skrynnikov, Ó. Millet, D. Torchia +1 more
2002Journal of the American Chemical Society125 citations
Semantic Scholar
High resolution 1H detected 1H,13C correlation spectra in MAS solid-state NMR using deuterated proteins with selective 1H,2H isotopic labeling of methyl groups.
Vipin Agarwal, A. Diehl, N. Skrynnikov, B. Reif
2006Journal of the American Chemical Society116 citations
Semantic Scholar
Protein side-chain dynamics as observed by solution- and solid-state NMR spectroscopy: a similarity revealed.
Vipin Agarwal, Yi Xue, B. Reif, N. Skrynnikov
2008Journal of the American Chemical Society102 citations
Semantic Scholar
Structural determinants for high-affinity binding in a Nedd4 WW3* domain-Comm PY motif complex.
V. Kanelis, M. C. Bruce, N. Skrynnikov, D. Rotin +1 more
2006Structure91 citations Open access
Semantic Scholar
What is the average conformation of bacteriophage T4 lysozyme in solution? A domain orientation study using dipolar couplings measured by solution NMR.
Natalie K. Goto, N. Skrynnikov, F. Dahlquist, L. E. Kay
2001Journal of Molecular Biology82 citations
Semantic Scholar
Observing the overall rocking motion of a protein in a crystal
Peixiang Ma, Yi Xue, N. Coquelle, Jens D. Haller +7 more
2015Nature Communications78 citations Open access
Semantic Scholar
Slow conformational exchange and overall rocking motion in ubiquitin protein crystals
Vilius Kurauskas, S. A. Izmailov, O. Rogacheva, Audrey Hessel +9 more
2017Nature Communications75 citations Open access
Semantic Scholar
Methyl rotation barriers in proteins from 2H relaxation data. Implications for protein structure.
Yi Xue, M. Pavlova, Y. Ryabov, B. Reif +1 more
2007Journal of the American Chemical Society68 citations
Semantic Scholar
Microsecond time-scale conformational exchange in proteins: using long molecular dynamics trajectory to simulate NMR relaxation dispersion data.
Yi Xue, Joshua M. Ward, Tai-Ran Yuwen, I. S. Podkorytov +1 more
2012Journal of the American Chemical Society63 citations
Semantic Scholar
15NH/D-SOLEXSY experiment for accurate measurement of amide solvent exchange rates: application to denatured drkN SH3
Veniamin Chevelkov, Yi Xue, D. K. Rao, J. Forman-Kay +1 more
2010Journal of Biomolecular NMR62 citations
Semantic Scholar
Protein side-chain dynamics observed by solution- and solid-state NMR: comparative analysis of methyl 2H relaxation data.
B. Reif, Yi Xue, Vipin Agarwal, M. Pavlova +4 more
2006Journal of the American Chemical Society60 citations
Semantic Scholar
Supporting Information Comparison of Solid-State Dipolar Couplings and Solution Relaxation Data Provides Insight into Protein Backbone Dynamics
Veniamin Chevelkov, Yi Xue, R. Linser, N. Skrynnikov +1 more
201057 citations
Semantic Scholar
Combined Analysis of 15N Relaxation Data from Solid- and Solution-State NMR Spectroscopy
Veniamin Chevelkov, A. Zhuravleva, Yi Xue, B. Reif +1 more
200754 citations
Semantic Scholar
Paramagnetic relaxation enhancements in unfolded proteins: Theory and application to drkN SH3 domain
Yi Xue, I. S. Podkorytov, D. K. Rao, Nathan Benjamin +2 more
2009Protein Science53 citations Open access
Semantic Scholar
Comparison of 13CH3, 13CH2D, and 13CHD2 methyl labeling strategies in proteins
J. Ollerenshaw, V. Tugarinov, N. Skrynnikov, L. Kay
2005Journal of Biomolecular NMR53 citations
Semantic Scholar
Motion of a disordered polypeptide chain as studied by paramagnetic relaxation enhancements, 15N relaxation, and molecular dynamics simulations: how fast is segmental diffusion in denatured ubiquitin?
Yi Xue, N. Skrynnikov
2011Journal of the American Chemical Society49 citations
Semantic Scholar
Onset of disorder and protein aggregation due to oxidation-induced intermolecular disulfide bonds: case study of RRM2 domain from TDP-43
S. Rabdano, S. A. Izmailov, D. Luzik, Adam T. Groves +2 more
2017Scientific Reports48 citations Open access
Semantic Scholar
Role of electrostatic interactions in binding of peptides and intrinsically disordered proteins to their folded targets. 1. NMR and MD characterization of the complex between the c-Crk N-SH3 domain and the peptide Sos.
Yi Xue, Tai-Ran Yuwen, Fangqiang Zhu, N. Skrynnikov
2014Biochemistry41 citations
Semantic Scholar
A New Amide Proton R1ρ Experiment Permits Accurate Characterization of Microsecond Time-scale Conformational Exchange
C. Eichmüller, N. Skrynnikov
2005Journal of Biomolecular NMR40 citations
Semantic Scholar
Histone H4 Tails in Nucleosomes: a Fuzzy Interaction with DNA
S. Rabdano, Matthew D. Shannon, S. A. Izmailov, Nicole Gonzalez Salguero +5 more
2021Angewandte Chemie39 citations Open access
Semantic Scholar
CP-HISQC: a better version of HSQC experiment for intrinsically disordered proteins under physiological conditions
Tai-Ran Yuwen, N. Skrynnikov
2014Journal of Biomolecular NMR38 citations
Semantic Scholar
Domain orientation in β-cyclodextrin-loaded maltose binding protein: Diffusion anisotropy measurements confirm the results of a dipolar coupling study
P. Hwang, N. Skrynnikov, L. Kay
2001Journal of Biomolecular NMR38 citations
Semantic Scholar
Detecting protein kinase recognition modes of calmodulin by residual dipolar couplings in solution NMR.
T. Mal, N. Skrynnikov, K. L. Yap, L. Kay +1 more
2002Biochemistry37 citations
Semantic Scholar
Assessment of molecular structure using frame-independent orientational restraints derived from residual dipolar couplings
N. Skrynnikov, L. Kay
2000Journal of Biomolecular NMR36 citations
Semantic Scholar
Observation of μs time-scale protein dynamics in the presence of Ln3+ ions: application to the N-terminal domain of cardiac troponin C
C. Eichmüller, N. Skrynnikov
200731 citations
Semantic Scholar
Proton-decoupled CPMG: a better experiment for measuring (15)N R2 relaxation in disordered proteins.
Tai-Ran Yuwen, N. Skrynnikov
2014Journal of magnetic resonance (San Diego, Calif. 1997 : Print)26 citations
Semantic Scholar
What Drives 15N Spin Relaxation in Disordered Proteins? Combined NMR/MD Study of the H4 Histone Tail.
K. Kämpf, S. A. Izmailov, S. Rabdano, Adam T. Groves +2 more
2018Biophysical Journal24 citations Open access
Semantic Scholar
Ensemble MD simulations restrained via crystallographic data: Accurate structure leads to accurate dynamics
Yi Xue, N. Skrynnikov
2014Protein Science23 citations Open access
Semantic Scholar
A new structural arrangement in proteins involving lysine NH3+ group and carbonyl
O. Rogacheva, S. A. Izmailov, L. Slipchenko, N. Skrynnikov
2017Scientific Reports20 citations Open access
Semantic Scholar
Conformational and Interaction Landscape of Histone H4 Tails in Nucleosomes Probed by Paramagnetic NMR Spectroscopy
Wen-Jun Sun, Olga O. Lebedenko, Nicole Gonzalez Salguero, Matthew D. Shannon +4 more
2023Journal of the American Chemical Society19 citations
Semantic Scholar
Role of Electrostatic Interactions in Binding of Peptides and Intrinsically Disordered Proteins to Their Folded Targets: 2. The Model of Encounter Complex Involving the Double Mutant of the c-Crk N-SH3 Domain and Peptide Sos.
Tai-Ran Yuwen, Yi Xue, N. Skrynnikov
2016Biochemistry19 citations
Semantic Scholar
Domain cooperativity in multidomain proteins: what can we learn from molecular alignment in anisotropic media?
Tai-Ran Yuwen, C. Post, N. Skrynnikov
2011Journal of Biomolecular NMR19 citations Open access
Semantic Scholar
Correlation Spectra in MAS Solid-State NMR using Deuterated Proteins with Selective 1 H , 2 H Isotopic Labeling of Methyl Groups
Vipin Agarwal, A. Diehl, N. Skrynnikov, B. Reif
200618 citations
Semantic Scholar
Relative Orientation of Peptide Planes in Proteins Is Reflected in Carbonyl-Carbonyl Chemical Shift Anisotropy Cross-Correlated Spin Relaxation
N. Skrynnikov, R. Konrat, D. Muhandiram, L. Kay
200018 citations
Semantic Scholar
X-ray Crystallography Module in MD Simulation Program Amber 2023. Refining the Models of Protein Crystals
Oleg Mikhailovskii, S. A. Izmailov, Yi Xue, David A. Case +1 more
2023Journal of Chemical Information and Modeling17 citations
Semantic Scholar
Estimating the Accuracy of Protein Structures using Residual Dipolar Couplings
Katya Simon, Jun Xu, Chinpal Kim, N. Skrynnikov
2005Journal of Biomolecular NMR15 citations
Semantic Scholar
Simple MD-based model for oxidative folding of peptides and proteins
S. A. Izmailov, I. S. Podkorytov, N. Skrynnikov
2017Scientific Reports12 citations Open access
Semantic Scholar
A new spin probe of protein dynamics: nitrogen relaxation in 15N-2H amide groups.
Jun Xu, Ó. Millet, L. Kay, N. Skrynnikov
2005Journal of the American Chemical Society12 citations
Semantic Scholar
Comparison of 13 CH 3 , 13 CH 2 D, and 13 CHD 2<
J. Ollerenshaw, V. Tugarinov, N. Skrynnikov, L. Kay
200512 citations
Semantic Scholar
Microsecond time-scale dynamics from relaxation in the rotating frame: experiments using spin lock with alternating phase.
I. S. Podkorytov, N. Skrynnikov
2004Journal of magnetic resonance (San Diego, Calif. 1997 : Print)12 citations
Semantic Scholar
Aromatic ring flips in differently packed ubiquitin protein crystals from MAS NMR and MD
Diego F. Gauto, Olga O. Lebedenko, L. M. Becker, I. Ayala +3 more
2022bioRxiv11 citations Open access
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