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M. Ellington · SciRah

Researcher profile · Semantic Scholar

M. Ellington

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M. Ellington — researcher profile on SciRah

h-index: 47
Works: 125
Citations: 12K

Most-cited papers

Rapid Whole-Genome Sequencing for Investigation of a Neonatal MRSA Outbreak
C. Köser, M. Holden, M. Ellington, E. Cartwright +16 more
2012New England Journal of Medicine675 citations Open access
Semantic Scholar
Whole-genome sequencing for analysis of an outbreak of meticillin-resistant Staphylococcus aureus: a descriptive study
S. R. Harris, E. Cartwright, M. Török, M. T. Holden +7 more
2013Lancet. Infectious Diseases (Print)599 citations Open access
Semantic Scholar
Routine Use of Microbial Whole Genome Sequencing in Diagnostic and Public Health Microbiology
C. Köser, M. Ellington, E. Cartwright, S. Gillespie +7 more
2012PLoS Pathogens548 citations Open access
Semantic Scholar
The role of whole genome sequencing in antimicrobial susceptibility testing of bacteria: report from the EUCAST Subcommittee.
M. Ellington, O. Ekelund, F. M. Aarestrup, R. Cantón +17 more
2017Clinical Microbiology and Infection540 citations Open access
Semantic Scholar
Molecular mechanisms disrupting porin expression in ertapenem-resistant Klebsiella and Enterobacter spp. clinical isolates from the UK.
M. Doumith, M. Ellington, D. Livermore, N. Woodford
2009Journal of Antimicrobial Chemotherapy470 citations Open access
Semantic Scholar
Whole-genome sequencing to control antimicrobial resistance
C. Köser, M. Ellington, S. Peacock
2014Trends in Genetics318 citations Open access
Semantic Scholar
COVID-19 and the potential long-term impact on antimicrobial resistance
T. Rawson, Luke S.P. Moore, E. Castro-Sánchez, E. Charani +4 more
2020Journal of Antimicrobial Chemotherapy301 citations Open access
Semantic Scholar
The diversity of Klebsiella pneumoniae surface polysaccharides
Rainer Follador, E. Heinz, K. Wyres, M. Ellington +3 more
2016Microbial Genomics295 citations Open access
Semantic Scholar
Emergence of methicillin resistance predates the clinical use of antibiotics
J. Larsen, C. Raisen, Xiao-Liang Ba, N. Sadgrove +60 more
2022Nature245 citations Open access
Semantic Scholar
Detection of the plasmid-mediated mcr-1 gene conferring colistin resistance in human and food isolates of Salmonella enterica and Escherichia coli in England and Wales.
M. Doumith, G. Godbole, P. Ashton, L. Larkin +9 more
2016Journal of Antimicrobial Chemotherapy245 citations
Semantic Scholar
Whole-Genome Sequencing for Rapid Susceptibility Testing of M. tuberculosis
C. Köser, J. Bryant, J. Becq, M. Török +6 more
2013New England Journal of Medicine229 citations Open access
Semantic Scholar
Novel staphylococcal species that form part of a Staphylococcus aureus-related complex: the non-pigmented Staphylococcus argenteus sp. nov. and the non-human primate-associated Staphylococcus schweitzeri sp. nov.
Steven Y. C. Tong, F. Schaumburg, M. Ellington, J. Corander +7 more
2015International Journal of Systematic and Evolutionary Microbiology203 citations Open access
Semantic Scholar
Rapid Bacterial Whole-Genome Sequencing to Enhance Diagnostic and Public Health Microbiology
S. Reuter, M. Ellington, E. Cartwright, C. Köser +10 more
2013JAMA Internal Medicine196 citations Open access
Semantic Scholar
Extended-spectrum β-lactamase-producing Escherichia coli in human-derived and foodchain-derived samples from England, Wales, and Scotland: an epidemiological surveillance and typing study.
M. Day, K. Hopkins, D. Wareham, M. Toleman +9 more
2019Lancet. Infectious Diseases (Print)180 citations Open access
Semantic Scholar
AdeABC-mediated efflux and tigecycline MICs for epidemic clones of Acinetobacter baumannii.
M. Hornsey, M. Ellington, M. Doumith, C. Thomas +6 more
2010Journal of Antimicrobial Chemotherapy151 citations Open access
Semantic Scholar
A high-resolution genomic analysis of multidrug-resistant hospital outbreaks of Klebsiella pneumoniae
Hao Chung The, A. Karkey, Duy Pham Thanh, Christine J. Boinett +17 more
2015EMBO Molecular Medicine126 citations Open access
Semantic Scholar
Discordant bioinformatic predictions of antimicrobial resistance from whole-genome sequencing data of bacterial isolates: an inter-laboratory study
R. Doyle, D. O'Sullivan, Sean Aller, Sebastian Bruchmann +17 more
2019bioRxiv122 citations Open access
Semantic Scholar
Optimizing antimicrobial use: challenges, advances and opportunities
T. Rawson, Richard C. Wilson, D. O'Hare, P. Herrero +7 more
2021Nature Reviews Microbiology118 citations
Semantic Scholar
A pilot study of rapid whole-genome sequencing for the investigation of a Legionella outbreak
S. Reuter, T. Harrison, C. Köser, M. Ellington +5 more
2013BMJ Open118 citations Open access
Semantic Scholar
Whole-genome comparison of two Acinetobacter baumannii isolates from a single patient, where resistance developed during tigecycline therapy.
M. Hornsey, N. Loman, D. Wareham, M. Ellington +8 more
2011Journal of Antimicrobial Chemotherapy111 citations Open access
Semantic Scholar
Decline of EMRSA-16 amongst methicillin-resistant Staphylococcus aureus causing bacteraemias in the UK between 2001 and 2007.
M. Ellington, R. Hope, D. Livermore, A. Kearns +4 more
2010Journal of Antimicrobial Chemotherapy109 citations Open access
Semantic Scholar
Distinct Bacteriophages Encoding Panton-Valentine Leukocidin (PVL) among International Methicillin-Resistant Staphylococcus aureus Clones Harboring PVL
E. Boakes, A. Kearns, M. Ganner, Claire Perry +2 more
2010Journal of Clinical Microbiology93 citations Open access
Semantic Scholar
Polyclonal multiply antibiotic-resistant methicillin-resistant Staphylococcus aureus with Panton-Valentine leucocidin in England.
M. Ellington, M. Ganner, M. Warner, B. Cookson +1 more
2010Journal of Antimicrobial Chemotherapy88 citations
Semantic Scholar
Characterization of plasmids encoding extended-spectrum β-lactamases and their addiction systems circulating among Escherichia coli clinical isolates in the UK.
M. Doumith, Hiran Dhanji, M. Ellington, P. Hawkey +1 more
2012Journal of Antimicrobial Chemotherapy86 citations
Semantic Scholar
Molecular epidemiology of Klebsiella pneumoniae invasive infections over a decade at Kilifi County Hospital in Kenya
Sonal P. Henson, Christine J. Boinett, M. Ellington, Ngure Kagia +7 more
2017International Journal of Medical Microbiology74 citations Open access
Semantic Scholar
Ordering the mob: Insights into replicon and MOB typing schemes from analysis of a curated dataset of publicly available plasmids
Alex Orlek, H. Phan, A. Sheppard, M. Doumith +7 more
2017Plasmid71 citations Open access
Semantic Scholar
Rapid single-colony whole-genome sequencing of bacterial pathogens
C. Köser, L. Fraser, Avgousta Ioannou, J. Becq +9 more
2013Journal of Antimicrobial Chemotherapy70 citations Open access
Semantic Scholar
Rapid Whole-Genome Sequencing for Investigation of a Suspected Tuberculosis Outbreak
M. Török, S. Reuter, J. Bryant, C. Köser +7 more
2012Journal of Clinical Microbiology70 citations Open access
Semantic Scholar
Emergence and clonal spread of colistin resistance due to multiple mutational mechanisms in carbapenemase-producing Klebsiella pneumoniae in London
J. Otter, M. Doumith, F. Davies, S. Mookerjee +13 more
2017Scientific Reports61 citations Open access
Semantic Scholar
Association of Novel Nonsynonymous Single Nucleotide Polymorphisms in ampD with Cephalosporin Resistance and Phylogenetic Variations in ampC, ampR, ompF, and ompC in Enterobacter cloacae Isolates That Are Highly Resistant to Carbapenems
Baharak Babouee Flury, M. Ellington, K. Hopkins, J. Turton +6 more
2016Antimicrobial Agents and Chemotherapy60 citations Open access
Semantic Scholar
Clinical and molecular epidemiology of ciprofloxacin-susceptible MRSA encoding PVL in England and Wales
M. Ellington, C. Perry, M. Ganner, M. Warner +7 more
2009European Journal of Clinical Microbiology and Infectious Diseases60 citations
Semantic Scholar
First isolation of MRSA ST398 from UK animals: a new challenge for infection control teams?
A. Loeffler, A. Kearns, M. Ellington, L. Smith +4 more
2009Journal of Hospital Infection51 citations Open access
Semantic Scholar
Rapid susceptibility profiling of carbapenem-resistant Klebsiella pneumoniae
K. Mulroney, J. M. Hall, X. Huang, E. Turnbull +10 more
2017Scientific Reports50 citations Open access
Semantic Scholar
Multicentre evaluation of a real-time PCR assay to detect genes encoding clinically relevant carbapenemases in cultured bacteria.
M. Ellington, J. Findlay, K. Hopkins, D. Meunier +7 more
2016International Journal of Antimicrobial Agents50 citations
Semantic Scholar
Emergence of AcrAB-mediated tigecycline resistance in a clinical isolate of Enterobacter cloacae during ciprofloxacin treatment.
M. Hornsey, M. Ellington, M. Doumith, G. Scott +2 more
2010International Journal of Antimicrobial Agents50 citations
Semantic Scholar
Activity of β-lactam/taniborbactam (VNRX-5133) combinations against carbapenem-resistant Gram-negative bacteria.
S. Mushtaq, A. Vickers, M. Doumith, M. Ellington +2 more
2020Journal of Antimicrobial Chemotherapy48 citations Open access
Semantic Scholar
Reconciling the Potentially Irreconcilable? Genotypic and Phenotypic Amoxicillin-Clavulanate Resistance in Escherichia coli
T. Davies, N. Stoesser, A. Sheppard, M. AbuOun +18 more
2019Antimicrobial Agents and Chemotherapy47 citations Open access
Semantic Scholar
Emergent and evolving antimicrobial resistance cassettes in community-associated fusidic acid and meticillin-resistant Staphylococcus aureus
M. Ellington, S. Reuter, S. R. Harris, M. T. Holden +9 more
2015International Journal of Antimicrobial Agents46 citations Open access
Semantic Scholar
Tigecycline resistance in Serratia marcescens associated with up-regulation of the SdeXY-HasF efflux system also active against ciprofloxacin and cefpirome.
M. Hornsey, M. Ellington, M. Doumith, S. Hudson +2 more
2010Journal of Antimicrobial Chemotherapy46 citations Open access
Semantic Scholar
Genomic Epidemiology of Complex, Multispecies, Plasmid-Borne blaKPC Carbapenemase in Enterobacterales in the United Kingdom from 2009 to 2014
N. Stoesser, H. Phan, A. Seale, Z. Aiken +35 more
2020Antimicrobial Agents and Chemotherapy43 citations Open access
Semantic Scholar
A curated dataset of complete Enterobacteriaceae plasmids compiled from the NCBI nucleotide database
A. Orlek, H. Phan, A. E. Sheppard, M. Doumith +7 more
2017Data in Brief40 citations Open access
Semantic Scholar
Global Scale Dissemination of ST93: A Divergent Staphylococcus aureus Epidemic Lineage That Has Recently Emerged From Remote Northern Australia
S. V. van Hal, E. Steinig, P. Andersson, Matthew T. G. Holden +15 more
2018Frontiers in Microbiology38 citations Open access
Semantic Scholar
Molecular diversity within clonal complex 22 methicillin-resistant Staphylococcus aureus encoding Panton-Valentine leukocidin in England and Wales.
Elizabeth H. Boakes, Angela M. Kearns, M. Ganner, C. Perry +3 more
2011Clinical Microbiology and Infection38 citations Open access
Semantic Scholar
What’s in a Name? Species-Wide Whole-Genome Sequencing Resolves Invasive and Noninvasive Lineages of Salmonella enterica Serotype Paratyphi B
T. Connor, S. Owen, G. Langridge, Steve Connell +21 more
2016mBio37 citations Open access
Semantic Scholar
Utility of a novel multiplex TaqMan PCR assay for metallo-β-lactamase genes plus other TaqMan assays in detecting genes encoding serine carbapenemases and clinically significant extended-spectrum β-lactamases.
R. Swayne, M. Ellington, M. Curran, N. Woodford +1 more
2013International Journal of Antimicrobial Agents37 citations
Semantic Scholar
Community and nosocomial transmission of Panton-Valentine leucocidin-positive community-associated meticillin-resistant Staphylococcus aureus: implications for healthcare.
J. Orendi, N. Coetzee, M. Ellington, Eve Boakes +4 more
2010Journal of Hospital Infection36 citations
Semantic Scholar
Incidence and Characterisation of Methicillin-Resistant Staphylococcus aureus (MRSA) from Nasal Colonisation in Participants Attending a Cattle Veterinary Conference in the UK
G. K. Paterson, E. Harrison, E. Craven, A. Petersen +7 more
2013PLoS ONE33 citations Open access
Semantic Scholar
Panton-Valentine leukocidin-encoding bacteriophage and gene sequence variation in community-associated methicillin-resistant Staphylococcus aureus.
Jonathan A. Otter, Angela M. Kearns, G. French, M. Ellington
2010Clinical Microbiology and Infection33 citations Open access
Semantic Scholar
Alterations in chromosomal genes nfsA, nfsB, and ribE are associated with nitrofurantoin resistance in Escherichia coli from the United Kingdom
Yu Wan, E. Mills, Rhoda C. Y. Leung, Ana Vieira +6 more
2021Microbial Genomics32 citations Open access
Semantic Scholar
Detection of OXA-48-like and NDM carbapenemases producing Klebsiella pneumoniae in Jordan: A pilot study.
A. Aqel, P. Giakkoupi, H. Alzoubi, Ibrahim Masalha +2 more
2017Journal of Infection and Public Health32 citations Open access
Semantic Scholar

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