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A. Charkowski · SciRah

Researcher profile · Semantic Scholar

A. Charkowski

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A. Charkowski — researcher profile on SciRah

h-index: 44
Works: 112
Citations: 6,403

Most-cited papers

Host range and molecular phylogenies of the soft rot enterobacterial genera pectobacterium and dickeya.
B. Ma, Michael E. Hibbing, Hyesook Kim, R. Reedy +7 more
2007Phytopathology434 citations
Semantic Scholar
The Changing Face of Bacterial Soft-Rot Diseases.
A. Charkowski
2018Annual Review of Phytopathology273 citations
Semantic Scholar
Salmonella enterica Virulence Genes Are Required for Bacterial Attachment to Plant Tissue
J. Barak, L. Gorski, P. Naraghi-Arani, A. Charkowski
2005Applied and Environmental Microbiology267 citations Open access
Semantic Scholar
Evaluation of isolation methods and RNA integrity for bacterial RNA quantitation.
C. Jahn, A. Charkowski, D. K. Willis
2008Journal of Microbiological Methods234 citations
Semantic Scholar
The role of secretion systems and small molecules in soft-rot Enterobacteriaceae pathogenicity.
A. Charkowski, C. Blanco, G. Condemine, D. Expert +19 more
2012Annual Review of Phytopathology225 citations Open access
Semantic Scholar
Reinventing potato as a diploid inbred line-based crop
S. Jansky, A. Charkowski, D. Douches, Gabe Gusmini +17 more
2016213 citations Open access
Semantic Scholar
The role of cellulose and O-antigen capsule in the colonization of plants by Salmonella enterica.
J. Barak, C. Jahn, D. Gibson, A. Charkowski
2007Molecular Plant-Microbe Interactions187 citations
Semantic Scholar
Seed degeneration in potato: the need for an integrated seed health strategy to mitigate the problem in developing countries
S. Thomas-Sharma, A. Abdurahman, S. Ali, J. Andrade-Piedra +9 more
2016186 citations Open access
Semantic Scholar
The Erwinia chrysanthemi Type III Secretion System Is Required for Multicellular Behavior
Yap Mee-Ngan, Ching-Hong Yang, J. Barak, C. Jahn +1 more
2005Journal of Bacteriology134 citations Open access
Semantic Scholar
Global Effect of Indole-3-Acetic Acid Biosynthesis on Multiple Virulence Factors of Erwinia chrysanthemi 3937
Shi-Hui Yang, Qiu Zhang, Jian-Hua Guo, A. Charkowski +4 more
2006Applied and Environmental Microbiology121 citations Open access
Semantic Scholar
The Plant Phenolic Compound p-Coumaric Acid Represses Gene Expression in the Dickeya dadantii Type III Secretion System
Yan Li, Quan Peng, Dija A Selimi, Qi Wang +3 more
2008Applied and Environmental Microbiology117 citations Open access
Semantic Scholar
Genome Sequence of the Plant-Pathogenic Bacterium Dickeya dadantii 3937
Jeremy D. Glasner, Ching-Hong Yang, S. Reverchon, N. Hugouvieux-Cotte-Pattat +43 more
2011Journal of Bacteriology116 citations Open access
Semantic Scholar
Niche-specificity and the variable fraction of the Pectobacterium pan-genome.
Jeremy D. Glasner, M. Marquez-Villavicencio, H. Kim, C. Jahn +10 more
2008Molecular Plant-Microbe Interactions112 citations Open access
Semantic Scholar
Genomic Diversity of Erwinia carotovora subsp. carotovora and Its Correlation with Virulence
Yap Mee-Ngan, J. Barak, A. Charkowski
2004Applied and Environmental Microbiology105 citations Open access
Semantic Scholar
Phylogeny and Virulence of Naturally Occurring Type III Secretion System-Deficient Pectobacterium Strains
Hyesook Kim, B. Ma, N. Perna, A. Charkowski
2009Applied and Environmental Microbiology94 citations Open access
Semantic Scholar
Potato Common Scab: a Review of the Causal Pathogens, Management Practices, Varietal Resistance Screening Methods, and Host Resistance
Sarah Braun, A. Gevens, A. Charkowski, C. Allen +1 more
2017American Journal of Potato Research87 citations
Semantic Scholar
Dynamic regulation of GacA in type III secretion, pectinase gene expression, pellicle formation, and pathogenicity of Dickeya dadantii (Erwinia chrysanthemi 3937).
Shi-Hui Yang, Quan Peng, Qiu Zhang, X. Yi +4 more
2008Molecular Plant-Microbe Interactions86 citations
Semantic Scholar
Bacterial Diseases of Potato
A. Charkowski, K. Sharma, M. Parker, G. Secor +1 more
2020The Potato Crop84 citations Open access
Semantic Scholar
The 3-Hydroxy-2-Butanone Pathway Is Required for Pectobacterium carotovorum Pathogenesis
Maria del Pilar Marquez-Villavicencio, B. Weber, R. Andrews Witherell, D. K. Willis +1 more
2011PLoS ONE82 citations Open access
Semantic Scholar
The soft rot Erwinia
A. Charkowski
200781 citations
Semantic Scholar
The Dickeya dadantii biofilm matrix consists of cellulose nanofibres, and is an emergent property dependent upon the type III secretion system and the cellulose synthesis operon.
C. Jahn, Dija A Selimi, J. Barak, A. Charkowski
2011Microbiology79 citations Open access
Semantic Scholar
Integrated Control of Potato Pathogens Through Seed Potato Certification and Provision of Clean Seed Potatoes.
K. Frost, R. Groves, A. Charkowski
2013Plant Disease73 citations Open access
Semantic Scholar
Soft Rot Disease Severity Is Affected by Potato Physiology and Pectobacterium taxa.
Maria Del Pilar Marquez-Villavicencio, R. Groves, A. Charkowski
2011Plant Disease67 citations
Semantic Scholar
Diseases Caused by Pectobacterium and Dickeya Species Around the World
J. V. van der Wolf, I. Acuña, S. D. de Boer, M. Brurberg +32 more
202162 citations Open access
Semantic Scholar
Pectobacterium carotovorum elicits plant cell death with DspE/F but the P. carotovorum DspE does not suppress callose or induce expression of plant genes early in plant-microbe interactions.
Hyesook Kim, Phanit Thammarat, S. Lommel, Clifford S. Hogan +1 more
2011Molecular Plant-Microbe Interactions62 citations
Semantic Scholar
The flagellar sigma factor fliA is required for Dickeya dadantii virulence.
C. Jahn, D. K. Willis, A. Charkowski
2008Molecular Plant-Microbe Interactions57 citations
Semantic Scholar
Biology and control of Pectobacterium in potato
A. Charkowski
2015American Journal of Potato Research54 citations
Semantic Scholar
The Role of ATP-binding Cassette (ABC) Transporters in Bacterial Phytopathogenesis.
Yuan Zeng, A. Charkowski
2020Phytopathology53 citations Open access
Semantic Scholar
Potato , Viruses , and Seed Certification in the USA to Provide Healthy Propagated Tubers
D. Halterman, A. Charkowski, J. Verchot
201252 citations
Semantic Scholar
Integrating Spectroscopy with Potato Disease Management.
J. Couture, Aditya Singh, A. Charkowski, Russell L. Groves +3 more
2018Plant Disease46 citations
Semantic Scholar
Salmonella enterica Suppresses Pectobacterium carotovorum subsp. carotovorum Population and Soft Rot Progression by Acidifying the Microaerophilic Environment
Grace Kwan, A. Charkowski, J. Barak
2013mBio46 citations Open access
Semantic Scholar
Evolution of the metabolic and regulatory networks associated with oxygen availability in two phytopathogenic enterobacteria
Lavanya Babujee, J. Apodaca, Venkatesh Balakrishnan, Paul Liss +4 more
2012BMC Genomics44 citations Open access
Semantic Scholar
Population behavior analysis of dspE and pelD regulation in Erwinia chrysanthemi 3937.
Quan Peng, Shi-Hui Yang, A. Charkowski, M. Yap +3 more
2006Molecular Plant-Microbe Interactions42 citations Open access
Semantic Scholar
Decaying signals: will understanding bacterial-plant communications lead to control of soft rot?
A. Charkowski
2009Current Opinion in Biotechnology40 citations
Semantic Scholar
Application of Marker Assisted Selection for Potato Virus Y Resistance in the University of Wisconsin Potato Breeding Program
A. C. Fulladolsa, F. Navarro, Rajitha Kota, Kristi Severson +2 more
2015American Journal of Potato Research37 citations
Semantic Scholar
The Type III Secreted Effector DspE Is Required Early in Solanum tuberosum Leaf Infection by Pectobacterium carotovorum to Cause Cell Death, and Requires Wx(3–6)D/E Motifs
Clifford S. Hogan, B. Mole, S. Grant, D. K. Willis +1 more
2013PLoS ONE33 citations Open access
Semantic Scholar
Harpin Mediates Cell Aggregation in Erwinia chrysanthemi 3937
Yap Mee-Ngan, C. Rojas, Ching-Hong Yang, A. Charkowski
2006Journal of Bacteriology31 citations Open access
Semantic Scholar
Optimization of an isothermal recombinase polymerase amplification method for real-time detection of Potato virus Y O and N types in potato.
Lavanya Babujee, R. Witherell, Kakeru Mikami, D. Aiuchi +2 more
2019Journal of Virological Methods28 citations Open access
Semantic Scholar
Potato Seed Systems
G. Forbes, A. Charkowski, J. Andrade-Piedra, M. Parker +1 more
202027 citations Open access
Semantic Scholar
The Response regulator HrpY of Dickeya dadantii 3937 regulates virulence genes not linked to the hrp cluster.
M. Yap, Ching-Hong Yang, A. Charkowski
2008Molecular Plant-Microbe Interactions27 citations
Semantic Scholar
Underexplored Niches in Research on Plant Pathogenic Bacteria
C. Allen, A. Bent, A. Charkowski
2009Plant Physiology25 citations Open access
Semantic Scholar
Straw mulch increases potato yield and suppresses weeds in an organic production system
R. Genger, D. Rouse, A. Charkowski
201824 citations
Semantic Scholar
Species of Dickeya and Pectobacterium Isolated during an Outbreak of Blackleg and Soft Rot of Potato in Northeastern and North Central United States
Rebecca D. Curland, Amanda Mainello, K. Perry, Jian-Jun J. Hao +9 more
2021Microorganisms23 citations Open access
Semantic Scholar
Interkingdom Signaling Interference: The Effect of Plant-Derived Small Molecules on Quorum Sensing in Plant-Pathogenic Bacteria.
J. Joshi, N. Khazanov, A. Charkowski, A. Faigenboim +2 more
2021Annual Review of Phytopathology23 citations
Semantic Scholar
Metabolites from wild potato inhibit virulence factors of the soft rot and blackleg pathogen Pectobacterium brasiliense.
J. Joshi, Lin-Xing Yao, A. Charkowski, A. Heuberger
2020Molecular Plant-Microbe Interactions21 citations Open access
Semantic Scholar
Diploid Potatoes as a Catalyst for Change in the Potato Industry
P. Bethke, D. Halterman, D. Francis, Ji-Ming Jiang +3 more
2022American Journal of Potato Research20 citations Open access
Semantic Scholar
Direct binding of salicylic acid to Pectobacterium N-acyl-homoserine lactone synthase.
J. Joshi, N. Khazanov, Nirmal Khadka, A. Charkowski +4 more
2020ACS Chemical Biology19 citations
Semantic Scholar
Low-Cost Potato Tissue Culture with Microwave and Bleach Media Preparation and Sterilization
B. Weber, R. Witherell, A. Charkowski
2015American Journal of Potato Research16 citations
Semantic Scholar
Development of the Automated Primer Design Workflow Uniqprimer and Diagnostic Primers for the Broad-Host-Range Plant Pathogen Dickeya dianthicola.
Shaista Karim, R. R. McNally, Afnan S Nasaruddin, A. Dereeper +5 more
2019Plant Disease15 citations Open access
Semantic Scholar
Identification of host-microbe interaction factors in the genomes of soft rot-associated pathogens Dickeya dadantii 3937 and Pectobacterium carotovorum WPP14 with supervised machine learning
B. Ma, A. Charkowski, Jeremy D. Glasner, N. Perna
2014BMC Genomics13 citations Open access
Semantic Scholar

Frequent co-authors

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Ching-Hong Yang×9
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Ching-Hong Yang — researcher profile on SciRah
N. Perna×7
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N. Perna — researcher profile on SciRah
J. Barak×6
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J. Barak — researcher profile on SciRah
C. Jahn×6
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C. Jahn — researcher profile on SciRah

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I. Yedidia — researcher profile on SciRah

Jeremy D. Glasner×5

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Jeremy D. Glasner — researcher profile on SciRah

D. K. Willis×4

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D. K. Willis — researcher profile on SciRah

Shi-Hui Yang×4

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Shi-Hui Yang — researcher profile on SciRah

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B. Ma — researcher profile on SciRah

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Hyesook Kim — researcher profile on SciRah

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I. Toth — researcher profile on SciRah

Yap Mee-Ngan×3

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Yap Mee-Ngan — researcher profile on SciRah