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K. Savijoki · SciRah

Researcher profile · Semantic Scholar

K. Savijoki

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K. Savijoki — researcher profile on SciRah

h-index: 29
Works: 94
Citations: 3,494

Most-cited papers

Proteolytic systems of lactic acid bacteria
K. Savijoki, H. Ingmer, P. Varmanen
2006Applied Microbiology and Biotechnology858 citations
Semantic Scholar
Clp ATPases and ClpP proteolytic complexes regulate vital biological processes in low GC, Gram‐positive bacteria
Dorte Frees, K. Savijoki, P. Varmanen, H. Ingmer
2007Molecular Microbiology302 citations
Semantic Scholar
Proteomics and Transcriptomics Characterization of Bile Stress Response in Probiotic Lactobacillus rhamnosus GG*
K. Koskenniemi, Kati Laakso, J. Koponen, M. Kankainen +10 more
2010Molecular & Cellular Proteomics203 citations Open access
Semantic Scholar
Effect of acid stress on protein expression and phosphorylation in Lactobacillus rhamnosus GG.
J. Koponen, Kati Laakso, K. Koskenniemi, M. Kankainen +6 more
2012Journal of Proteomics172 citations Open access
Semantic Scholar
Growth phase‐associated changes in the proteome and transcriptome of Lactobacillus rhamnosus GG in industrial‐type whey medium
Kati Laakso, K. Koskenniemi, J. Koponen, M. Kankainen +8 more
2011Microbial Biotechnology82 citations Open access
Semantic Scholar
High level heterologous protein production in Lactococcus and Lactobacillus using a new secretion system based on the Lactobacillus brevis S-layer signals.
K. Savijoki, M. Kahala, A. Palva
1997Gene81 citations
Semantic Scholar
An X-prolyl dipeptidyl aminopeptidase (pepX) gene from Lactobacillus helveticus.
Erkki Vesanto, K. Savijoki, T. Rantanen, James L. Steele +1 more
1995Microbiology74 citations Open access
Semantic Scholar
New insights into Staphylococcus aureus stress tolerance and virulence regulation from an analysis of the role of the ClpP protease in the strains Newman, COL, and SA564.
Dorte Frees, J. H. Andersen, Lene Hemmingsen, K. Koskenniemi +7 more
2012Journal of Proteome Research67 citations
Semantic Scholar
Proteome analysis of Lactobacillus rhamnosus GG using 2-D DIGE and mass spectrometry shows differential protein production in laboratory and industrial-type growth media.
K. Koskenniemi, J. Koponen, M. Kankainen, K. Savijoki +4 more
2009Journal of Proteome Research65 citations Open access
Semantic Scholar
Synthesis and biological evaluation of hybrid quinolone-based quaternary ammonium antibacterial agents.
J. Fedorowicz, J. Sączewski, A. Konopacka, K. Waleron +8 more
2019European journal of medicinal chemistry62 citations Open access
Semantic Scholar
BluB/CobT2 fusion enzyme activity reveals mechanisms responsible for production of active form of vitamin B12 by Propionibacterium freudenreichii
P. Deptula, Petri Kylli, B. Chamlagain, Liisa Holm +4 more
2015Microbial Cell Factories62 citations Open access
Semantic Scholar
Comparative proteome cataloging of Lactobacillus rhamnosus strains GG and Lc705.
K. Savijoki, N. Lietzén, M. Kankainen, T. Alatossava +3 more
2011Journal of Proteome Research62 citations Open access
Semantic Scholar
Heat and DNA damage induction of the LexA‐like regulator HdiR from Lactococcus lactis is mediated by RecA and ClpP
K. Savijoki, H. Ingmer, Dorte Frees, F. Vogensen +2 more
2003Molecular Microbiology62 citations Open access
Semantic Scholar
Effect of heat-shock and bile salts on protein synthesis of Bifidobacterium longum revealed by [35S]methionine labelling and two-dimensional gel electrophoresis.
K. Savijoki, A. Suokko, A. Palva, L. Valmu +2 more
2005FEMS Microbiology Letters60 citations Open access
Semantic Scholar
Structural and Functional Dynamics of Staphylococcus aureus Biofilms and Biofilm Matrix Proteins on Different Clinical Materials
Anna K. Hiltunen, K. Savijoki, T. Nyman, I. Miettinen +3 more
2019Microorganisms58 citations Open access
Semantic Scholar
Food-Like Growth Conditions Support Production of Active Vitamin B12 by Propionibacterium freudenreichii 2067 without DMBI, the Lower Ligand Base, or Cobalt Supplementation
P. Deptula, B. Chamlagain, Minnamari Edelmann, Panchanit Sangsuwan +4 more
2017Frontiers in Microbiology58 citations Open access
Semantic Scholar
Alpha- and β-casein components of host milk induce biofilm formation in the mastitis bacterium Streptococcus uberis.
E. Varhimo, P. Varmanen, A. Fallarero, Malena E. Skogman +5 more
2011Veterinary Microbiology58 citations
Semantic Scholar
In vivo expression of the Lactobacillus brevis S-layer gene
M. Kahala, K. Savijoki, A. Palva
1997Journal of Bacteriology54 citations Open access
Semantic Scholar
ClpL is essential for induction of thermotolerance and is potentially part of the HrcA regulon in Lactobacillus gasseri
A. Suokko, M. Poutanen, K. Savijoki, N. Kalkkinen +1 more
2008Proteomics51 citations
Semantic Scholar
The Cell Wall Polymer Lipoteichoic Acid Becomes Nonessential in Staphylococcus aureus Cells Lacking the ClpX Chaperone
Kristoffer T. Bæk, Lisa Bowman, C. Millership, Mia Dupont Søgaard +7 more
2016mBio50 citations Open access
Semantic Scholar
Uncovering surface-exposed antigens of Lactobacillus rhamnosus by cell shaving proteomics and two-dimensional immunoblotting.
E. Espino, K. Koskenniemi, Lourdes Mato-Rodriguez, T. Nyman +7 more
2015Journal of Proteome Research42 citations
Semantic Scholar
Molecular genetic characterization of the L-lactate dehydrogenase gene (ldhL) of Lactobacillus helveticus and biochemical characterization of the enzyme
K. Savijoki, A. Palva
1997Applied and Environmental Microbiology41 citations Open access
Semantic Scholar
Characterization of a Mobile clpL Gene from Lactobacillus rhamnosus
A. Suokko, K. Savijoki, Erja Malinen, A. Palva +1 more
2005Applied and Environmental Microbiology39 citations Open access
Semantic Scholar
Comparative analysis of excretory-secretory antigens of Trichinella spiralis and Trichinella britovi muscle larvae by two-dimensional difference gel electrophoresis and immunoblotting
J. Bień, A. Näreaho, P. Varmanen, K. Goździk +4 more
2012Proteome Science38 citations Open access
Semantic Scholar
Mass spectrometry analysis of the excretory-secretory (E-S) products of the model cestode Hymenolepis diminuta reveals their immunogenic properties and the presence of new E-S proteins in cestodes
J. Bień, R. Sałamatin, A. Sulima, K. Savijoki +3 more
2016Acta Parasitologica37 citations
Semantic Scholar
University of Groningen Identification of a novel streptococcal gene cassette mediating SOS mutagenesis in Streptococcus uberis Varhimo,
E. Varhimo, K. Savijoki, J. Jalava, O. Kuipers +1 more
200737 citations
Semantic Scholar
Growth Mode and Carbon Source Impact the Surfaceome Dynamics of Lactobacillus rhamnosus GG
K. Savijoki, T. Nyman, V. Kainulainen, I. Miettinen +5 more
2019bioRxiv34 citations Open access
Semantic Scholar
Screening of FDA-Approved Drugs Using a 384-Well Plate-Based Biofilm Platform: The Case of Fingolimod
S. Gilbert-Girard, K. Savijoki, J. Yli-Kauhaluoma, A. Fallarero
2020Microorganisms33 citations Open access
Semantic Scholar
Complete genome sequence of Propionibacterium freudenreichii DSM 20271T
Patrik Koskinen, P. Deptula, Olli-Pekka Smolander, Fitsum Tamene +6 more
2015Standards in Genomic Sciences32 citations Open access
Semantic Scholar
X-Prolyl Dipeptidyl Aminopeptidase Gene (pepX) Is Part of the glnRA Operon inLactobacillus rhamnosus
P. Varmanen, K. Savijoki, Silja Åvall, A. Palva +1 more
2000Journal of Bacteriology29 citations Open access
Semantic Scholar
Antibacterial and antibiofilm activity of permanently ionized quaternary ammonium fluoroquinolones.
J. Fedorowicz, C. D. Cruz, M. Morawska, Krzesimir Ciura +8 more
2023European journal of medicinal chemistry28 citations Open access
Semantic Scholar
Optimization of a High-Throughput 384-Well Plate-Based Screening Platform with Staphylococcus aureus ATCC 25923 and Pseudomonas aeruginosa ATCC 15442 Biofilms
S. Gilbert-Girard, K. Savijoki, J. Yli-Kauhaluoma, A. Fallarero
2020International Journal of Molecular Sciences25 citations Open access
Semantic Scholar
Comparative Proteomic Analysis of Hymenolepis diminuta Cysticercoid and Adult Stages
A. Sulima, K. Savijoki, J. Bień, A. Näreaho +3 more
2018Frontiers in Microbiology25 citations Open access
Semantic Scholar
New convenient defined media for [35S]methionine labelling and proteomic analyses of probiotic lactobacilli
K. Savijoki, A. Suokko, A. Palva, P. Varmanen
2006Letters in Applied Microbiology25 citations Open access
Semantic Scholar
Purification and Molecular Characterization of a Tripeptidase (PepT) from Lactobacillus helveticus
K. Savijoki, A. Palva
2000Applied and Environmental Microbiology25 citations Open access
Semantic Scholar
Immunoproteomics and Surfaceomics of the Adult Tapeworm Hymenolepis diminuta
D. Młocicki, A. Sulima, J. Bień, A. Näreaho +5 more
2018Frontiers in Immunology24 citations Open access
Semantic Scholar
De novo assembly of genomes from long sequence reads reveals uncharted territories of Propionibacterium freudenreichii
P. Deptula, P. Laine, R. Roberts, Olli-Pekka Smolander +7 more
2017BMC Genomics24 citations Open access
Semantic Scholar
Growth Mode and Physiological State of Cells Prior to Biofilm Formation Affect Immune Evasion and Persistence of Staphylococcus aureus
K. Savijoki, I. Miettinen, T. Nyman, Maarit Kortesoja +3 more
2020Microorganisms23 citations Open access
Semantic Scholar
Proteomic analysis of Chlamydia pneumoniae-infected HL cells reveals extensive degradation of cytoskeletal proteins.
K. Savijoki, J. Alvesalo, P. Vuorela, M. Leinonen +1 more
2008FEMS Immunology & Medical Microbiology23 citations
Semantic Scholar
Comparative exoprotein profiling of different Staphylococcus epidermidis strains reveals potential link between nonclassical protein export and virulence.
Pia Siljamäki, P. Varmanen, M. Kankainen, A. Sukura +2 more
2014Journal of Proteome Research22 citations
Semantic Scholar
Genomics and Proteomics Provide New Insight into the Commensal and Pathogenic Lifestyles of Bovine- and Human-Associated Staphylococcus epidermidis Strains.
K. Savijoki, A. Iivanainen, Pia Siljamäki, P. Laine +14 more
2014Journal of Proteome Research21 citations
Semantic Scholar
Ciprofloxacin induces mutagenesis to antibiotic resistance independent of UmuC in Streptococcus uberis.
E. Varhimo, K. Savijoki, Hanna Jefremoff, J. Jalava +2 more
2008Environmental Microbiology21 citations
Semantic Scholar
Surfaceome and Exoproteome Dynamics in Dual-Species Pseudomonas aeruginosa and Staphylococcus aureus Biofilms
I. Reigada, Paola San-Martin-Galindo, S. Gilbert-Girard, Jacopo Chiaro +5 more
2021Frontiers in Microbiology19 citations Open access
Semantic Scholar
Identification of immunogenic proteins of the cysticercoid of Hymenolepis diminuta
A. Sulima, J. Bień, K. Savijoki, A. Näreaho +3 more
2017Parasites & Vectors18 citations Open access
Semantic Scholar
Surface-Shaving Proteomics of Mycobacterium marinum Identifies Biofilm Subtype-Specific Changes Affecting Virulence, Tolerance, and Persistence
K. Savijoki, H. Myllymäki, Hanna Luukinen, Lauri Paulamäki +8 more
2021bioRxiv16 citations Open access
Semantic Scholar
Screening of natural compounds identifies ferutinin as an antibacterial and anti-biofilm compound
S. Gilbert-Girard, I. Reigada, K. Savijoki, J. Yli-Kauhaluoma +1 more
2021Biofouling (Print)15 citations Open access
Semantic Scholar
Synthesis and Biological Evaluation of Fingolimod Derivatives as Antibacterial Agents
M. Zore, S. Gilbert-Girard, I. Reigada, Jayendra Z. Patel +3 more
2021ACS Omega15 citations Open access
Semantic Scholar
Strategies to Prevent Biofilm Infections on Biomaterials: Effect of Novel Naturally-Derived Biofilm Inhibitors on a Competitive Colonization Model of Titanium by Staphylococcus aureus and SaOS-2 Cells
I. Reigada, R. Pérez-Tanoira, Jayendra Z. Patel, K. Savijoki +3 more
2020Microorganisms15 citations Open access
Semantic Scholar
Repurposing the Sphingosine-1-Phosphate Receptor Modulator Etrasimod as an Antibacterial Agent Against Gram-Positive Bacteria
M. Zore, S. Gilbert-Girard, Paola San-Martin-Galindo, I. Reigada +5 more
2022Frontiers in Microbiology14 citations Open access
Semantic Scholar
Two-dimensional difference gel electrophoresis analysis of Streptococcus uberis in response to mutagenesis-inducing ciprofloxacin challenge.
M. Poutanen, E. Varhimo, N. Kalkkinen, A. Sukura +2 more
2009Journal of Proteome Research14 citations
Semantic Scholar

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