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J. V. van Vugt · SciRah

Researcher profile · Semantic Scholar

J. V. van Vugt

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J. V. van Vugt — researcher profile on SciRah

h-index: 20
Works: 45
Citations: 2,412

Most-cited papers

Prognosis for patients with amyotrophic lateral sclerosis: development and validation of a personalised prediction model.
H. Westeneng, Thomas P. A. Debray, A. Visser, R. V. van Eijk +43 more
2018Lancet Neurology473 citations Open access
Semantic Scholar
ExpansionHunter: a sequence-graph-based tool to analyze variation in short tandem repeat regions
E. Dolzhenko, Viraj Deshpande, F. Schlesinger, P. Krusche +18 more
2019bioRxiv360 citations Open access
Semantic Scholar
Detection of long repeat expansions from PCR-free whole-genome sequence data
E. Dolzhenko, J. V. van Vugt, Richard J. Shaw, M. Bekritsky +40 more
2016bioRxiv357 citations Open access
Semantic Scholar
Project MinE: study design and pilot analyses of a large-scale whole-genome sequencing study in amyotrophic lateral sclerosis
W. van Rheenen, S. Pulit, Annelot M. Dekker, A. Al Khleifat +34 more
2017European Journal of Human Genetics181 citations Open access
Semantic Scholar
ExpansionHunter Denovo: a computational method for locating known and novel repeat expansions in short-read sequencing data
E. Dolzhenko, M. Bennett, P. Richmond, B. Trost +15 more
2019Genome Biology171 citations Open access
Semantic Scholar
Genome-wide study of DNA methylation shows alterations in metabolic, inflammatory, and cholesterol pathways in ALS
P. Hop, R. Zwamborn, E. Hannon, Gemma Shireby +79 more
2022Science Translational Medicine90 citations Open access
Semantic Scholar
FISH mapping and molecular organization of the major repetitive sequences of tomato
Song-Bin Chang, Tae-Jin Yang, E. Datema, J. V. van Vugt +7 more
2008Chromosome Research90 citations Open access
Semantic Scholar
Glutaminase Deficiency Caused by Short Tandem Repeat Expansion in GLS
A. V. van Kuilenburg, M. Tarailo-Graovac, P. Richmond, B. Drögemöller +41 more
2019New England Journal of Medicine78 citations Open access
Semantic Scholar
Sequence-based prediction of single nucleosome positioning and genome-wide nucleosome occupancy
T. van der Heijden, J. V. van Vugt, C. Logie, J. van Noort
2012Proceedings of the National Academy of Sciences of the United States of America76 citations Open access
Semantic Scholar
dCHD3, a Novel ATP-Dependent Chromatin Remodeler Associated with Sites of Active Transcription
M. Murawska, Natascha Kunert, J. V. van Vugt, G. Längst +3 more
2008Molecular and Cellular Biology64 citations Open access
Semantic Scholar
The ins and outs of ATP-dependent chromatin remodeling in budding yeast: biophysical and proteomic perspectives.
J. V. van Vugt, M. Ranes, C. Campsteijn, C. Logie
2007Biochimica et Biophysica Acta54 citations Open access
Semantic Scholar
ATXN1 repeat expansions confer risk for amyotrophic lateral sclerosis and contribute to TDP-43 mislocalization
Gijs H. P. Tazelaar, S. Boeynaems, Mathias De Decker, J. V. van Vugt +34 more
2020Brain Communications51 citations Open access
Semantic Scholar
Multiple Aspects of ATP-Dependent Nucleosome Translocation by RSC and Mi-2 Are Directed by the Underlying DNA Sequence
J. V. van Vugt, Maarten Johannes De Jager, M. Murawska, A. Brehm +2 more
2009PLoS ONE50 citations Open access
Semantic Scholar
The impact of age on genetic testing decisions in amyotrophic lateral sclerosis
P. Mehta, A. Iacoangeli, S. Opie-Martin, J. V. van Vugt +9 more
2022Brain : a journal of neurology43 citations Open access
Semantic Scholar
NOR activity and repeat sequences of the paternal sex ratio chromosome of the parasitoid wasp Trichogramma kaykai
J. V. van Vugt, S. de Nooijer, R. Stouthamer, H. de Jong
2005Chromosoma42 citations Open access
Semantic Scholar
The origin of a selfish B chromosome triggering paternal sex ratio in the parasitoid wasp Trichogramma kaykai
J. V. van Vugt, H. de Jong, R. Stouthamer
2009Proceedings of the Royal Society of London. Biological Sciences31 citations Open access
Semantic Scholar
The paternal sex ratio chromosome in the parasitic wasp Trichogramma kaykai condenses the paternal chromosomes into a dense chromatin mass.
J. V. van Vugt, M. Salverda, J. D. de Jong, R. Stouthamer
2003Genome30 citations Open access
Semantic Scholar
Genetic analysis of ALS cases in the isolated island population of Malta
Rebecca Borg, Maia Farrugia Wismayer, Karl Bonavia, Andrew Farrugia Wismayer +7 more
2021European Journal of Human Genetics28 citations Open access
Semantic Scholar
Reconsidering the causality of TIA1 mutations in ALS
R. V. D. van der Spek, W. van Rheenen, S. Pulit, K. Kenna +32 more
2017Amyotrophic Lateral Sclerosis and Frontotemporal Degeneration28 citations Open access
Semantic Scholar
Unexpected frequency of the pathogenic AR CAG repeat expansion in the general population
M. Zanovello, K. Ibañez, Anna-Leigh Brown, P. Sivakumar +20 more
2023Brain : a journal of neurology27 citations Open access
Semantic Scholar
Pharmacogenetic interactions in amyotrophic lateral sclerosis: a step closer to a cure?
R. V. van Eijk, M. Eijkemans, S. Nikolakopoulos, M. Jansen +9 more
2019The Pharmacogenomics Journal16 citations Open access
Semantic Scholar
Large-scale exome analyses reveal new rare variant contributions in amyotrophic lateral sclerosis
Paul J. Hop, M. Kooyman, Brendan J. Kenna, R. Zwamborn +81 more
2026Nature Genetics13 citations Open access
Semantic Scholar
A phenome-wide association study of methylated GC-rich repeats identifies a GCC repeat expansion in AFF3 associated with intellectual disability
Bharati Jadhav, Paras Garg, J. V. van Vugt, K. Ibañez +18 more
2024Nature Genetics11 citations
Semantic Scholar
Telomere length analysis in amyotrophic lateral sclerosis using large-scale whole genome sequence data
A. Al Khleifat, A. Iacoangeli, A. Jones, J. V. van Vugt +41 more
2022Frontiers in Cellular Neuroscience9 citations Open access
Semantic Scholar
Genome-wide study of DNA methylation in Amyotrophic Lateral Sclerosis identifies differentially methylated loci and implicates metabolic, inflammatory and cholesterol pathways
P. Hop, R. Zwamborn, E. Hannon, Gemma Shireby +79 more
2021medRxiv9 citations Open access
Semantic Scholar
An observational study of pleiotropy and penetrance of amyotrophic lateral sclerosis associated with CAG-repeat expansion of ATXN2
K. Demaegd, Aoife Kernan, J. Cooper-Knock, J. V. van Vugt +26 more
2025European Journal of Human Genetics8 citations Open access
Semantic Scholar
Mechanism-free repurposing of drugs for C9orf72-related ALS/FTD using large-scale genomic data
S. Saez-Atienzar, Cleide dos Santos Souza, Ruth Chia, Selina N. Beal +98 more
2024Cell Genomics6 citations Open access
Semantic Scholar
Whole genome sequencing analysis reveals post-zygotic mutation variability in monozygotic twins discordant for amyotrophic lateral sclerosis.
Gijs H. P. Tazelaar, P. Hop, M. Seelen, J. V. van Vugt +25 more
2022Neurobiology of Aging5 citations Open access
Semantic Scholar
Letter to the editor on a paper by Kaivola et al. (2020): carriership of two copies of C9orf72 hexanucleotide repeat intermediate-length alleles is not associated with amyotrophic lateral sclerosis or frontotemporal dementia
S. D. de Boer, Lauren Woolley, M. Mol, M. Serpente +12 more
2022Acta Neuropathologica Communications5 citations Open access
Semantic Scholar
A phenome-wide association study of methylated GC-rich repeats identifies a GCC repeat expansion in AFF3 as a significant cause of intellectual disability
Bharati Jadhav, Paras Garg, Joke, J. V. van Vugt +21 more
5 citations
Semantic Scholar
The Project MinE databrowser: bringing large-scale whole-genome sequencing in ALS to researchers and the public
R. V. D. van der Spek, W. van Rheenen, S. Pulit, K. Kenna +71 more
2018bioRxiv4 citations Open access
Semantic Scholar
Mode of action, origin and structure of the Paternal Sex Ratio chromosome in the parasitoid wasp Trichogramma kaykai
J. V. van Vugt
20054 citations Open access
Semantic Scholar
Chromosomal resolution reveals symbiotic virus colonization of parasitic wasp genomes
J. Gauthier, Hélène Boulain, J. V. van Vugt, Lyam Baudry +47 more
2020bioRxiv3 citations Open access
Semantic Scholar
Paraspeckle condensation is controlled via TDP-43 polymerization and linked to neuroprotection
Rachel E Hodgson, Wan-Ping Huang, Ruaridh Lang, Vedanth Kumar +21 more
2026Nature Cell Biology2 citations Open access
Semantic Scholar
Sex-specific DNA methylation differences in Amyotrophic lateral sclerosis
Olivia A. Grant, A. Iacoangeli, R. Zwamborn, W. van Rheenen +35 more
2024bioRxiv2 citations Open access
Semantic Scholar
A GCC repeat expansion in AFF3 is a significant cause of intellectual disability
Bharati Jadhav, Paras Garg, J. V. van Vugt, K. Garikano +11 more
2023medRxiv1 citations Open access
Semantic Scholar
Characterising the motif composition and allele length distribution of ZFHX3 GGC repeat expansions in amyotrophic lateral sclerosis
Z. Zussa, A. N. Smith, J. V. van Vugt, D. O'Shaughnessy +12 more
2026medRxiv0 citations Open access
Semantic Scholar
Lessons from a systematic review of family-based studies in ALS.
Bi-nan Wang, R. V. D. van der Spek, Justus van Nispen Tot Sevenaer, J. V. van Vugt +6 more
2026Amyotrophic Lateral Sclerosis and Frontotemporal Degeneration0 citations Open access
Semantic Scholar
The role of disease-associated short tandem repeats in amyotrophic lateral sclerosis
J. V. van Vugt, R. Zwamborn, E. Dolzhenko, M. Eberle +15 more
2025Brain Communications0 citations Open access
Semantic Scholar
ExpansionHunter Denovo: a suite of tools for detecting novel expansions of short tandem repeats
E. Dolzhenko, M. Bennett, P. Richmond, B. Trost +15 more
20200 citations
Semantic Scholar
Synthetic Point Mutagenesis
Roman A. G. Schaeken, J. V. van Vugt, C. Logie
20120 citations Open access
Semantic Scholar
Comparative AFLP reveals paternal sex ratio chromosome specific DNA sequences in the parasitoid wasp Trichogramma kaykai.
J. V. van Vugt, R. V. D. van der Hulst, Andrea J. Pruijssers, P. Verbaarschot +2 more
2009Genome0 citations Open access
Semantic Scholar
Paternal sex ratio chromosomes in parasitoid wasps: an overview of the ins and outs of these extremely selfish B chromosomes
J. V. van Vugt, J. D. de Jong
20060 citations
Semantic Scholar
Mode of action of the paternal sex ratio (PSR) chromosome in the parasitic wasps Nasonia vitripennis and Trichogramma kaykai
R. Hoekstra, J. C. van Lenteren, J. D. de Jong, R. Stouthamer +1 more
20010 citations
Semantic Scholar
Werking van het paternale sex ratio (PSR) chromosoom bij de parasitaire wespen Nasonia vitripennis en Trichogramma kaykai
R. Hoekstra, J. C. van Lenteren, J. D. de Jong, R. Stouthamer +1 more
20010 citations
Semantic Scholar

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