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B. Rosen · SciRah

Researcher profile · Semantic Scholar

B. Rosen

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B. Rosen — researcher profile on SciRah

h-index: 35
Works: 101
Citations: 7,374

Most-cited papers

The Medicago Genome Provides Insight into the Evolution of Rhizobial Symbioses
N. Young, F. Debelle, G. Oldroyd, R. Geurts +120 more
2011Nature1,246 citations Open access
Semantic Scholar
Draft genome sequence of chickpea (Cicer arietinum) provides a resource for trait improvement
R. Varshney, Chi Song, R. Saxena, Sarwar Azam +45 more
2013Nature Biotechnology1,213 citations Open access
Semantic Scholar
MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs.
J. Zhai, D. Jeong, E. De Paoli, Sunhee Park +12 more
2011Genes & Development681 citations Open access
Semantic Scholar
De novo assembly of the cattle reference genome with single-molecule sequencing
B. Rosen, D. Bickhart, R. Schnabel, S. Koren +29 more
2020GigaScience591 citations Open access
Semantic Scholar
An improved genome release (version Mt4.0) for the model legume Medicago truncatula
Hai-Bao Tang, V. Krishnakumar, Shelby L. Bidwell, B. Rosen +9 more
2014BMC Genomics402 citations Open access
Semantic Scholar
A multi-tissue atlas of regulatory variants in cattle
Shuli Liu, Yahui Gao, O. Canela-Xandri, Sheng Wang +24 more
2022Nature Genetics234 citations Open access
Semantic Scholar
Araport: the Arabidopsis Information Portal
V. Krishnakumar, M. Hanlon, S. Contrino, Erik S. Ferlanti +13 more
2014Nucleic Acids Res.203 citations Open access
Semantic Scholar
Signatures of selection and environmental adaptation across the goat genome post-domestication
F. Bertolini, B. Servin, A. Talenti, E. Rochat +20 more
2018Genetics Selection Evolution161 citations Open access
Semantic Scholar
Pigeonpea genomics initiative (PGI): an international effort to improve crop productivity of pigeonpea (Cajanus cajan L.)
R. Varshney, R. Penmetsa, S. Dutta, P. Kulwal +26 more
2009Molecular breeding158 citations Open access
Semantic Scholar
Genome-wide SNP profiling of worldwide goat populations reveals strong partitioning of diversity and highlights post-domestication migration routes
L. Colli, M. Milanesi, A. Talenti, F. Bertolini +20 more
2018Genetics Selection Evolution145 citations Open access
Semantic Scholar
Chromosome-level assembly of the water buffalo genome surpasses human and goat genomes in sequence contiguity
W. Low, R. Tearle, D. Bickhart, B. Rosen +11 more
2019Nature Communications141 citations Open access
Semantic Scholar
Comprehensive analyses of 723 transcriptomes enhance genetic and biological interpretations for complex traits in cattle
L. Fang, Wentao Cai, Shuli Liu, O. Canela-Xandri +17 more
2020Genome Research130 citations Open access
Semantic Scholar
Haplotype-resolved genomes provide insights into structural variation and gene content in Angus and Brahman cattle
W. Low, R. Tearle, Ruijie Liu, S. Koren +18 more
2020Nature Communications111 citations Open access
Semantic Scholar
A sheep pangenome reveals the spectrum of structural variations and their effects on tail phenotypes
Ran Li, Mian Gong, Xin-Miao Zhang, Fei Wang +31 more
2023Genome Research90 citations Open access
Semantic Scholar
An improved ovine reference genome assembly to facilitate in-depth functional annotation of the sheep genome
K. Davenport, D. Bickhart, K. Worley, S. Murali +7 more
2022GigaScience83 citations Open access
Semantic Scholar
MTGD: The Medicago truncatula genome database.
V. Krishnakumar, Maria Kim, B. Rosen, S. Karamycheva +3 more
2015Plant and Cell Physiology71 citations
Semantic Scholar
Genome-wide CNV analysis reveals variants associated with growth traits in Bos indicus
Yang Zhou, Y. Utsunomiya, Lingyang Xu, E. Hay +12 more
2016BMC Genomics70 citations Open access
Semantic Scholar
Assembly of a pangenome for global cattle reveals missing sequences and novel structural variations, providing new insights into their diversity and evolutionary history
Yang Zhou, L.-V. Yang, Xiaotao Han, Jia-Zheng Han +13 more
2022Genome Research65 citations Open access
Semantic Scholar
Comparative whole genome DNA methylation profiling of cattle sperm and somatic tissues reveals striking hypomethylated patterns in sperm
Yang Zhou, E. Connor, D. Bickhart, Cong-Jun Li +6 more
2018GigaScience63 citations Open access
Semantic Scholar
Continuous chromosome-scale haplotypes assembled from a single interspecies F1 hybrid of yak and cattle
E. Rice, S. Koren, A. Rhie, M. P. Heaton +11 more
2020GigaScience59 citations Open access
Semantic Scholar
Structural variant-based pangenome construction has low sensitivity to variability of haplotype-resolved bovine assemblies
A. Leonard, D. Crysnanto, Z. Fang, M. P. Heaton +8 more
2021Nature Communications58 citations Open access
Semantic Scholar
Analysis of the Aedes albopictus C6/36 genome provides insight into cell line adaptations to in vitro viral propagation
J. Miller, S. Koren, Kari A Dilley, Vinita Puri +15 more
2017bioRxiv55 citations Open access
Semantic Scholar
The Bovine Pangenome Consortium: democratizing production and accessibility of genome assemblies for global cattle breeds and other bovine species
T. Smith, D. Bickhart, D. Boichard, A. Chamberlain +9 more
2023Genome Biology54 citations Open access
Semantic Scholar
Canfam_GSD: De novo chromosome-length genome assembly of the German Shepherd Dog (Canis lupus familiaris) using a combination of long reads, optical mapping, and Hi-C
M. Field, B. Rosen, Olga Dudchenko, E. Chan +16 more
2020GigaScience54 citations Open access
Semantic Scholar
Tangible and intangible benefits of local goats rearing in smallholder farms in Malawi
Wilson Kaumbata, L. Banda, G. Mészáros, T. Gondwe +5 more
2020Small Ruminant Research53 citations Open access
Semantic Scholar
Comparative whole genome DNA methylation profiling across cattle tissues reveals global and tissue-specific methylation patterns
Yang Zhou, Shuli Liu, Y. Hu, L. Fang +12 more
2020BMC Biology53 citations Open access
Semantic Scholar
Diversity of copy number variation in the worldwide goat population
Mei Liu, Yang Zhou, B. Rosen, C. P. Van Tassell +12 more
2018Heredity52 citations Open access
Semantic Scholar
Genomic rearrangements have consequences for introgression breeding as revealed by genome assemblies of wild and cultivated lentil species
L. Ramsay, C. Koh, S. Kagale, Dong-Ying Gao +24 more
2021bioRxiv51 citations Open access
Semantic Scholar
VarGoats project: a dataset of 1159 whole-genome sequences to dissect Capra hircus global diversity
Laure Denoyelle, E. Talouarn, P. Bardou, L. Colli +19 more
2021Genetics Selection Evolution45 citations Open access
Semantic Scholar
Chromosome-length genome assembly and structural variations of the primal Basenji dog (Canis lupus familiaris) genome
Richard J. Edwards, M. Field, James M. Ferguson, Olga Dudchenko +15 more
2020bioRxiv43 citations Open access
Semantic Scholar
New insights into mammalian sex chromosome structure and evolution using high-quality sequences from bovine X and Y chromosomes
Ruijie Liu, W. Low, R. Tearle, S. Koren +8 more
2019BMC Genomics42 citations Open access
Semantic Scholar
Misidentification of runs of homozygosity islands in cattle caused by interference with copy number variation or large intermarker distances
Wilson Nandolo, Y. Utsunomiya, G. Mészáros, M. Wurzinger +12 more
2018Genetics Selection Evolution40 citations Open access
Semantic Scholar
Modernizing the Bovine Reference Genome Assembly
B. Rosen, D. Bickhart, R. Schnabel, S. Koren +9 more
201840 citations
Semantic Scholar
The Australian dingo is an early offshoot of modern breed dogs
M. Field, Sonu Yadav, Olga Dudchenko, Meera Esvaran +21 more
2022Science Advances37 citations Open access
Semantic Scholar
Comparative analyses of sperm DNA methylomes among human, mouse and cattle provide insights into epigenomic evolution and complex traits
L. Fang, Yang Zhou, Shuli Liu, Ji-Cai Jiang +9 more
2019Epigenetics35 citations Open access
Semantic Scholar
A Reference Genome Assembly of American Bison, Bison bison bison
Jonas Oppenheimer, B. Rosen, M. P. Heaton, B. V. Vander Ley +14 more
2021Journal of Heredity34 citations Open access
Semantic Scholar
A reference genome assembly of Simmental cattle, Bos taurus taurus.
M. P. Heaton, T. Smith, D. Bickhart, B. V. Vander Ley +14 more
2021Journal of Heredity34 citations Open access
Semantic Scholar
Short communication: Identification of the pseudoautosomal region in the Hereford bovine reference genome assembly ARS-UCD1.2.
T. Johnson, M. Keehan, C. Harland, T. Lopdell +5 more
2019Journal of Dairy Science34 citations Open access
Semantic Scholar
Whole genome structural analysis of Caribbean hair sheep reveals quantitative link to West African ancestry
G. Spangler, B. Rosen, M. B. Ilori, O. Hanotte +6 more
2017PLoS ONE33 citations Open access
Semantic Scholar
Reprogramming of Root Cells during Nitrogen-Fixing Symbiosis Involves Dynamic Polysome Association of Coding and Noncoding RNAs
Soledad Traubenik, M. Reynoso, K. Hobecker, Marcos Lancia +6 more
2019The Plant Cell32 citations Open access
Semantic Scholar
Diploid Brassica napus somatic hybrids: characterization of nuclear and organellar DNA
B. Rosen, C. Halldén, W. Heneen
1988Theoretical and Applied Genetics26 citations
Semantic Scholar
Experiences from the Implementation of Community-Based Goat Breeding Programs in Malawi and Uganda: A Potential Approach for Conservation and Improvement of Indigenous Small Ruminants in Smallholder Farms
Wilson Kaumbata, H. Nakimbugwe, Wilson Nandolo, L. Banda +7 more
2021Sustainability25 citations Open access
Semantic Scholar
Symposium review: Advances in sequencing technology herald a new frontier in cattle genomics and genome-enabled selection.
D. Bickhart, J. McClure, R. Schnabel, B. Rosen +2 more
2020Journal of Dairy Science25 citations Open access
Semantic Scholar
Integrating Signals from Sperm Methylome Analysis and Genome-Wide Association Study for a Better Understanding of Male Fertility in Cattle
L. Fang, Yang Zhou, Shuli Liu, Ji-Cai Jiang +9 more
2019Epigenomes25 citations Open access
Semantic Scholar
A comprehensive catalogue of regulatory variants in the cattle transcriptome
Shuli Liu, Yahui Gao, O. Canela-Xandri, Sheng Wang +20 more
2020bioRxiv24 citations Open access
Semantic Scholar
Geographical contrasts of Y‐chromosomal haplogroups from wild and domestic goats reveal ancient migrations and recent introgressions
V. Consortium, I. Nijman, B. Rosen, P. Bardou +65 more
2022Molecular Ecology22 citations Open access
Semantic Scholar
Genome-wide CNV analysis revealed variants associated with growth traits in African indigenous goats.
Mei Liu, Jennifer Woodward-Greene, Xiaolong Kang, Michael G Pan +4 more
2020Genomics21 citations Open access
Semantic Scholar
Copy number variation analysis reveals variants associated with milk production traits in dairy goats.
Xiaolong Kang, Mingxun Li, Mei Liu, Shuli Liu +4 more
2020Genomics19 citations Open access
Semantic Scholar
Morphometric Characterization of Local Goat Breeds in Two Agroecological Zones of Burkina Faso, West Africa
Badjibassa Akounda, D. Ouédraogo, A. Soudré, P. Burger +3 more
2023Animals18 citations Open access
Semantic Scholar
Polyribosomal RNA-Seq Reveals the Decreased Complexity and Diversity of the Arabidopsis Translatome
Xing-Tan Zhang, B. Rosen, Hai-Bao Tang, V. Krishnakumar +1 more
2015PLoS ONE17 citations Open access
Semantic Scholar

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