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K. Krawczyk · SciRah

Researcher profile · Semantic Scholar

K. Krawczyk

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K. Krawczyk — researcher profile on SciRah

h-index: 18
Works: 26
Citations: 2,723

Most-cited papers

SAbDab: the structural antibody database
James Dunbar, K. Krawczyk, Jinwoo Leem, T. Baker +4 more
2013Nucleic Acids Res.759 citations Open access
Semantic Scholar
Five computational developability guidelines for therapeutic antibody profiling
M. Raybould, Claire Marks, K. Krawczyk, Bruck Taddese +5 more
2019Proceedings of the National Academy of Sciences of the United States of America364 citations Open access
Semantic Scholar
Observed Antibody Space: A Resource for Data Mining Next-Generation Sequencing of Antibody Repertoires
Aleksandr Kovaltsuk, Jinwoo Leem, S. Kelm, James Snowden +2 more
2018Journal of Immunology263 citations Open access
Semantic Scholar
SAbPred: a structure-based antibody prediction server
James Dunbar, K. Krawczyk, Jinwoo Leem, Claire Marks +6 more
2016Nucleic Acids Res.203 citations Open access
Semantic Scholar
Computational approaches to therapeutic antibody design: established methods and emerging trends
R. Norman, Francesco Ambrosetti, A. Bonvin, Lucy J. Colwell +3 more
2019Briefings Bioinform.193 citations Open access
Semantic Scholar
Improving B-cell epitope prediction and its application to global antibody-antigen docking
K. Krawczyk, Xiao-Feng Liu, Terry S Baker, Jiye Shi +1 more
2014Bioinform.163 citations Open access
Semantic Scholar
Progress and challenges in predicting protein interfaces
Reyhaneh Esmaielbeiki, K. Krawczyk, B. Knapp, Jean-Christophe Nebel +1 more
2015Briefings Bioinform.129 citations Open access
Semantic Scholar
STCRDab: the structural T-cell receptor database
Jinwoo Leem, Saulo H. P. de Oliveira, K. Krawczyk, Charlotte M. Deane
2017Nucleic Acids Res.127 citations Open access
Semantic Scholar
Antibody i-Patch prediction of the antibody binding site improves rigid local antibody-antigen docking.
K. Krawczyk, Terry S Baker, Jiye Shi, Charlotte M. Deane
2013Protein engineering, design & selection : PEDS92 citations Open access
Semantic Scholar
Current advances in biopharmaceutical informatics: guidelines, impact and challenges in the computational developability assessment of antibody therapeutics
R. Khetan, R. Curtis, Charlotte M. Deane, J. T. Hadsund +8 more
2022mAbs78 citations Open access
Semantic Scholar
Machine-designed biotherapeutics: opportunities, feasibility and advantages of deep learning in computational antibody discovery
Wiktoria Wilman, Sonia Wróbel, Weronika Bielska, P. Deszynski +9 more
2022Briefings Bioinform.71 citations Open access
Semantic Scholar
INDI—integrated nanobody database for immunoinformatics
P. Deszynski, J. Mlokosiewicz, Adam Volanakis, I. Jaszczyszyn +4 more
2021medRxiv63 citations Open access
Semantic Scholar
How B-Cell Receptor Repertoire Sequencing Can Be Enriched with Structural Antibody Data
Aleksandr Kovaltsuk, K. Krawczyk, J. Galson, D. Kelly +2 more
2017Frontiers in Immunology52 citations Open access
Semantic Scholar
Structurally Mapping Antibody Repertoires
K. Krawczyk, S. Kelm, Aleksandr Kovaltsuk, J. Galson +12 more
2018Frontiers in Immunology39 citations Open access
Semantic Scholar
Data mining patented antibody sequences
K. Krawczyk, A. Buchanan, P. Marcatili
2020bioRxiv27 citations Open access
Semantic Scholar
Looking for therapeutic antibodies in next-generation sequencing repositories
K. Krawczyk, M. Raybould, Aleksandr Kovaltsuk, Charlotte M. Deane
2019bioRxiv26 citations Open access
Semantic Scholar
Computational Tools for Aiding Rational Antibody Design.
K. Krawczyk, James Dunbar, Charlotte M. Deane
2017Methods in molecular biology20 citations
Semantic Scholar
Structural modeling of antibody variable regions using deep learning—progress and perspectives on drug discovery
I. Jaszczyszyn, Weronika Bielska, Tomasz Gawlowski, Paweł Dudzic +10 more
2023Frontiers in Molecular Biosciences18 citations Open access
Semantic Scholar
AbDiver: a tool to explore the natural antibody landscape to aid therapeutic design
J. Mlokosiewicz, P. Deszynski, Wiktoria Wilman, I. Jaszczyszyn +5 more
2021bioRxiv17 citations Open access
Semantic Scholar
Filtering Ig-seq data using antibody structural information
Aleksandr Kovaltsuk, K. Krawczyk, S. Kelm, James Snowden +1 more
2018Journal of Immunology9 citations Open access
Semantic Scholar
Tertiary Element Interaction in HIV-1 TAR
K. Krawczyk, Adelene Y. L. Sim, B. Knapp, Charlotte M. Deane +1 more
2016Journal of Chemical Information and Modeling7 citations Open access
Semantic Scholar
Structural pre-training improves physical accuracy of antibody structure prediction using deep learning
Jarosław Kończak, Bartosz Janusz, J. Mlokosiewicz, T. Satlawa +3 more
2022bioRxiv4 citations Open access
Semantic Scholar
In silico structural modeling of multiple epigenetic marks on DNA
K. Krawczyk, Samuel Demharter, B. Knapp, Charlotte M. Deane +1 more
2018Bioinform.4 citations Open access
Semantic Scholar
The evolution of contact prediction: Evidence that contact selection in statistical contact prediction is changing
Mark Chonofsky, Saulo H. P. de Oliveira, K. Krawczyk, Charlotte M. Deane
2019bioRxiv3 citations Open access
Semantic Scholar
The Therapeutic Antibody Profiler (TAP): Five Computational Developability Guidelines
M. Raybould, Claire Marks, K. Krawczyk, Bruck Taddese +5 more
2018bioRxiv1 citations Open access
Semantic Scholar
Computational antibody design
K. Krawczyk
20130 citations
Semantic Scholar

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