Skip to content

Home Search Authors Pakistan News Saved

SciRah

SciRah does not host or store research papers. Results come live from free, official scholarly APIs, and every paper links back to its original source.

Data sources

OpenAlex
Semantic Scholar
Crossref
CORE
arXiv
PubMed

Privacy policy Terms of service

S. Burt · SciRah

Researcher profile · Semantic Scholar

S. Burt

Share profile

S. Burt — researcher profile on SciRah

h-index: 31
Works: 113
Citations: 3,287

Most-cited papers

High-Throughput GoMiner, an 'industrial-strength' integrative gene ontology tool for interpretation of multiple-microarray experiments, with application to studies of Common Variable Immune Deficiency (CVID)
B. Zeeberg, Haiying Qin, Sudarshan Narasimhan, Margot Sunshine +13 more
2005BMC Bioinformatics286 citations Open access
Semantic Scholar
Calculation of the aqueous solvation free energy of the proton
G. Tawa, I. Topol, S. Burt, R. Caldwell +1 more
1998256 citations
Semantic Scholar
Flap opening in HIV-1 protease simulated by ‘activated’ molecular dynamics
J. Collins, S. Burt, J. Erickson
1995Nature Structural Biology149 citations
Semantic Scholar
Free Energy of Amide Hydrogen Bond Formation in Vacuum, in Water, and in Liquid Alkane Solution
N. Ben-Tal, Doree Sitkoff, I. Topol, An-Suei Yang +2 more
1997136 citations
Semantic Scholar
Calculation of Absolute and Relative Acidities of Substituted Imidazoles in Aqueous Solvent
I. Topol, G. Tawa, S. Burt, A. Rashin
1997121 citations
Semantic Scholar
Increased serum levels of complement C3a anaphylatoxin indicate the presence of colorectal tumors.
J. Habermann, U. Roblick, B. Luke, Darue A. Prieto +13 more
2006Gastroenterology102 citations Open access
Semantic Scholar
QM/MM modeling the Ras–GAP catalyzed hydrolysis of guanosine triphosphate
B. Grigorenko, A. Nemukhin, I. Topol, R. Cachau +1 more
2005Proteins: Structure, Function, and Bioinformatics92 citations
Semantic Scholar
On the structure and thermodynamics of solvated monoatomic ions using a hybrid solvation model
I. Topol, G. Tawa, S. Burt, A. Rashin
199992 citations
Semantic Scholar
Mechanisms of guanosine triphosphate hydrolysis by Ras and Ras‐GAP proteins as rationalized by ab initio QM/MM simulations
B. Grigorenko, A. Nemukhin, M. Shadrina, I. Topol +1 more
2006Proteins: Structure, Function, and Bioinformatics89 citations
Semantic Scholar
alpha- and 3(10)-helix interconversion: a quantum-chemical study on polyalanine systems in the gas phase and in aqueous solvent.
I. Topol, S. Burt, E. Deretey, Ting Tang +3 more
2001Journal of the American Chemical Society74 citations
Semantic Scholar
Mechanism of the myosin catalyzed hydrolysis of ATP as rationalized by molecular modeling
B. Grigorenko, A. Rogov, I. Topol, S. Burt +2 more
2007Proceedings of the National Academy of Sciences of the United States of America73 citations Open access
Semantic Scholar
An exhaustive DNA micro-satellite map of the human genome using high performance computing.
J. Collins, R. Stephens, B. Gold, Bill Long +2 more
2003Genomics68 citations
Semantic Scholar
Modeling of biomolecular systems with the quantum mechanical and molecular mechanical method based on the effective fragment potential technique: Proposal of flexible fragments
B. Grigorenko, A. Nemukhin, I. Topol, S. Burt
200258 citations
Semantic Scholar
Flexible effective fragment QM/MM method: Validation through the challenging tests
A. Nemukhin, B. Grigorenko, I. Topol, S. Burt
2003Journal of Computational Chemistry57 citations
Semantic Scholar
(Salen)Mn(III)-catalyzed epoxidation reaction as a multichannel process with different spin states. Electronic tuning of asymmetric catalysis: a theoretical study.
Y. Abashkin, Jack R. Collins, S. Burt
2001Inorganic Chemistry50 citations
Semantic Scholar
Quantum chemical modeling of the GTP hydrolysis by the RAS-GAP protein complex.
I. Topol, R. Cachau, A. Nemukhin, B. Grigorenko +1 more
2004Biochimica et Biophysica Acta47 citations
Semantic Scholar
Acidity of Organic Molecules in the Gas Phase and in Aqueous Solvent
I. Topol, G. Tawa, R. Caldwell, M. Eissenstat +1 more
200046 citations
Semantic Scholar
Ab Initio and Density Functional Calculations on Ethylene Glycol
T. Oie, I. Topol, S. Burt
199446 citations
Semantic Scholar
Monte Carlo simulation of the influence of solvent on nucleic acid base associations.
Andrew Pohorille, S. Burt, R. MacElroy
1984Journal of the American Chemical Society42 citations
Semantic Scholar
All-atom models for the non-nucleoside binding site of HIV-1 reverse transcriptase complexed with inhibitors: a 3D QSAR approach.
Rick Gussio, Nagarajan Pattabiraman, Daniel W. Zaharevitz, Glen E. Kellogg +5 more
1996Journal of Medicinal Chemistry39 citations Open access
Semantic Scholar
Quantum chemical studies of a model for peptide bond formation. 2. Role of amine catalyst in formation of formamide and water from ammonia and formic acid
T. Oie, G. Loew, S. Burt, R. MacElroy
198339 citations
Semantic Scholar
Electronic Excitations of the Chromophore from the Fluorescent Protein asFP595 in Solutions.
A. Nemukhin, I. Topol, S. Burt
2006Journal of Chemical Theory and Computation38 citations
Semantic Scholar
The Use of Urine Proteomic and Metabonomic Patterns for the Diagnosis of Interstitial Cystitis and Bacterial Cystitis
Que N. Van, J. Klose, David A. Lucas, Darue A. Prieto +8 more
2004Disease Markers38 citations Open access
Semantic Scholar
(salen)MnIII compounds as nonpeptidyl mimics of catalase. Mechanism-based tuning of catalase activity: a theoretical study.
Y. Abashkin, S. Burt
2005Inorganic Chemistry37 citations
Semantic Scholar
Modeling of serine protease prototype reactions with the flexible effective fragment potential quantum mechanical/molecular mechanical method
A. Nemukhin, B. Grigorenko, A. Rogov, I. Topol +1 more
200437 citations
Semantic Scholar
(Salen)Mn-catalyzed epoxidation of alkenes: a two-zone process with different spin-state channels as suggested by DFT study.
Y. Abashkin, S. Burt
2004Organic Letters34 citations
Semantic Scholar
Theoretical studies on the hydrolysis of mono-phosphate and tri-phosphate in gas phase and aqueous solution.
Yan-Ni Wang, I. Topol, J. Collins, S. Burt
2003Journal of the American Chemical Society34 citations
Semantic Scholar
On the Origin of Potential Barrier for the Reaction OH- + CO2 → HCO3- in Water: Studies by Using Continuum and Cluster Solvation Methods
A. Nemukhin, I. Topol, B. Grigorenko, S. Burt
200233 citations
Semantic Scholar
A QM/MM approach with effective fragment potentials applied to the dipeptide–water structures
A. Nemukhin, B. Grigorenko, A. V. Bochenkova, I. Topol +1 more
200231 citations
Semantic Scholar
Hybrid cholecystokinin (CCK) antagonists: new implications in the design and modification of CCK antagonists.
J. Kerwin, Alex M. Nadzan, H. Kopecká, C. W. Lin +3 more
1989Journal of Medicinal Chemistry31 citations Open access
Semantic Scholar
(Salen)Mn(III) Compound as a Nonpeptidyl Mimic of Catalase: DFT Study of the Metal Oxidation by a Peroxide Molecule
Yuri G. Abashkin, S. Burt
200430 citations
Semantic Scholar
Quantum Chemical Investigation of Enzymatic Activity in DNA Polymerase β. A Mechanistic Study
Y. Abashkin, John W. Erickson, S. Burt
200130 citations
Semantic Scholar
Theoretical calculations of glycine and alanine gas-phase acidities
I. Topol, S. Burt, N. Russo, M. Toscano
1999Journal of the American Society for Mass Spectrometry30 citations
Semantic Scholar
Can contemporary density functional theory yield accurate thermodynamics for hydrogen bonding
I. Topol, S. Burt, A. Rashin
199530 citations
Semantic Scholar
Triazene proton affinities: A comparison between density functional, Hartree–Fock, and post‐Hartree–Fock methods
A. Schmiedekamp, I. Topol, S. Burt, H. Razafinjanahary +3 more
1994Journal of Computational Chemistry30 citations
Semantic Scholar
Solution influence on biomolecular equilibria: nucleic acid base associations.
Andrew Pohorille, Lawrence R. Pratt, S. Burt, R. MacElroy
1984Journal of Biomolecular Structure and Dynamics30 citations
Semantic Scholar
Ground-state structures and vertical excitations for the kindling fluorescent protein asFP595.
B. Grigorenko, A. Savitsky, I. Topol, S. Burt +1 more
2006Journal of Physical Chemistry B29 citations
Semantic Scholar
Calculation of Substituent Effects on pKa Values for Pyrone and Dihydropyrone Inhibitors of HIV-1 Protease
I. Topol, S. Burt, A. Rashin, J. Erickson
200028 citations
Semantic Scholar
Protonation of glycine and alanine: proton affinities, intrinsic basicities and proton transfer path
I. Topol, S. Burt, M. Toscano, N. Russo
199828 citations
Semantic Scholar
Quantum chemical modeling of reaction mechanism for 2-oxoglutarate dependent enzymes: effect of substitution of iron by nickel and cobalt.
I. Topol, A. Nemukhin, K. Salnikow, R. Cachau +3 more
2006Journal of Physical Chemistry A27 citations
Semantic Scholar
Theoretical Study of the Low Lying Electronic States of oxoX(salen) (X = Mn, Mn-, Fe, and Cr-) Complexes
J. Ivanic, Jack R. Collins, S. Burt
200427 citations
Semantic Scholar
Experimental determination and calculations of redox potential descriptors of compounds directed against retroviral zinc fingers: Implications for rational drug design
I. Topol, Connor F. McGrath, E. Chertova, C. Dasenbrock +5 more
2001Protein Science26 citations Open access
Semantic Scholar
IR Matrix Isolation and ab Initio Identification of Products of the Reactions of CH3Cl and CH3Br with Mg
V. N. Solov'ev, G. Sergeev, A. Nemukhin, S. Burt +1 more
199726 citations
Semantic Scholar
AB INITIO AND DENSITY FUNCTIONAL STUDIES ON INTERNAL ROTATION AND CORRESPONDING TRANSITION STATES IN CONJUGATED MOLECULES
T. Oie, I. Topol, S. Burt
199524 citations
Semantic Scholar
Quantum chemical studies of a model for peptide bond formation. 3. Role of magnesium cation in formation of amide and water from ammonia and glycine.
T. Oie, G. Loew, S. Burt, R. MacElroy
1984Journal of the American Chemical Society23 citations
Semantic Scholar
Quantum Chemical Simulations of the Proton Transfer in Water Wires Attached to Molecular Walls
A. Nemukhin, B. Grigorenko, I. Topol, S. Burt
200322 citations
Semantic Scholar
Calculation of Relative Binding Free Energies of Peptidic Inhibitors to HIV-1 Protease and Its I84V Mutant
G. Tawa, I. Topol, S. Burt, J. Erickson
199822 citations
Semantic Scholar
On the nature of oxoiron (IV) intermediate in dioxygen activation by non-heme enzymes
A. Nemukhin, I. Topol, R. Cachau, S. Burt
200621 citations
Semantic Scholar
Molecular mechanisms of resistance: Free energy calculations of mutation effects on inhibitor binding to HIV‐1 protease
S. Rick, I. Topol, S. Burt, John W. Erickson
1998Protein Science20 citations Open access
Semantic Scholar
Computational studies of the domain movement and the catalytic mechanism of thymidine phosphorylase
S. Rick, Yuri G. Abashkin, R. Hilderbrandt, S. Burt
1999Proteins: Structure, Function, and Bioinformatics19 citations Open access
Semantic Scholar

Frequent co-authors

Invite them to SciRah by sharing their profile.

I. Topol×33
Invite
I. Topol — researcher profile on SciRah
A. Nemukhin×15
Invite
A. Nemukhin — researcher profile on SciRah
B. Grigorenko×11
Invite
B. Grigorenko — researcher profile on SciRah
A. Rashin×6
Invite
A. Rashin — researcher profile on SciRah

×5

Invite

G. Tawa — researcher profile on SciRah

Invite

Y. Abashkin — researcher profile on SciRah

Invite

J. Collins — researcher profile on SciRah

Invite

R. Cachau — researcher profile on SciRah

Invite

T. Oie — researcher profile on SciRah

Invite

R. MacElroy — researcher profile on SciRah

Invite

J. Erickson — researcher profile on SciRah

Invite

R. Stephens — researcher profile on SciRah