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J. Flannery · SciRah

Researcher profile · Semantic Scholar

J. Flannery

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J. Flannery — researcher profile on SciRah

h-index: 16
Works: 52
Citations: 971

Most-cited papers

Concentration of Norovirus during Wastewater Treatment and Its Impact on Oyster Contamination
J. Flannery, S. Keaveney, P. Rajko-Nenow, V. O'Flaherty +1 more
2012Applied and Environmental Microbiology112 citations Open access
Semantic Scholar
Management of health risks associated with oysters harvested from a norovirus contaminated area, Ireland, February-March 2010.
B. Doré, S. Keaveney, J. Flannery, P. Rajko-Nenow
2010Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin87 citations Open access
Semantic Scholar
Use of FRNA bacteriophages to indicate the risk of norovirus contamination in Irish oysters.
J. Flannery, S. Keaveney, W. Doré
2009Journal of Food Protection77 citations Open access
Semantic Scholar
Norovirus Genotypes Present in Oysters and in Effluent from a Wastewater Treatment Plant during the Seasonal Peak of Infections in Ireland in 2010
P. Rajko-Nenow, A. Waters, S. Keaveney, J. Flannery +4 more
2013Applied and Environmental Microbiology61 citations Open access
Semantic Scholar
A novel strain of lumpy skin disease virus causes clinical disease in cattle in Hong Kong
J. Flannery, B. Shih, I. Haga, Martin Ashby +13 more
2021bioRxiv54 citations Open access
Semantic Scholar
Comparison of the Immunogenicities and Cross-Lineage Efficacies of Live Attenuated Peste des Petits Ruminants Virus Vaccines PPRV/Nigeria/75/1 and PPRV/Sungri/96
Sophia Hodgson, Katy Moffat, H. Hill, J. Flannery +3 more
2018Journal of Virology53 citations Open access
Semantic Scholar
Norovirus and FRNA bacteriophage determined by RT-qPCR and infectious FRNA bacteriophage in wastewater and oysters.
J. Flannery, S. Keaveney, P. Rajko-Nenow, V. O'Flaherty +1 more
2013Water Research52 citations
Semantic Scholar
Mass Die-Off of Saiga Antelopes, Kazakhstan, 2015
S. Fereidouni, G. Freimanis, Mukhit Orynbayev, Paolo Ribeca +8 more
2019Emerging Infectious Diseases48 citations Open access
Semantic Scholar
Evidence of reduced viremia, pathogenicity and vector competence in a re‐emerging European strain of bluetongue virus serotype 8 in sheep
J. Flannery, Beatriz Sanz-Bernardo, Martin Ashby, Hannah Brown +15 more
2018bioRxiv36 citations Open access
Semantic Scholar
Characterisation of norovirus contamination in an Irish shellfishery using real-time RT-qPCR and sequencing analysis.
P. Rajko-Nenow, S. Keaveney, J. Flannery, V. O'Flaherty +1 more
2012Journal of food microbiology36 citations Open access
Semantic Scholar
Rapid Detection of Peste des Petits Ruminants Virus (PPRV) Nucleic Acid Using a Novel Low-Cost Reverse Transcription Loop-Mediated Isothermal Amplification (RT-LAMP) Assay for Future Use in Nascent PPR Eradication Programme
M. Mahapatra, E. Howson, V. Fowler, C. Batten +3 more
2019Viruses32 citations Open access
Semantic Scholar
African Swine Fever Virus Genotype II in Mongolia, 2019.
Ulaankhuu Ankhanbaatar, Tserenchimed Sainnokhoi, Buyantogtokh Khanui, Gerelmaa Ulziibat +9 more
2021Transboundary and Emerging Diseases24 citations Open access
Semantic Scholar
Norovirus genotypes implicated in two oyster-related illness outbreaks in Ireland
P. Rajko-Nenow, S. Keaveney, J. Flannery, A. McIntyre +1 more
2013Epidemiology and Infection23 citations Open access
Semantic Scholar
Experimental infection of sheep, goats and cattle with a bluetongue virus serotype 4 field strain from Bulgaria, 2014.
C. Schulz, C. Sailleau, E. Bréard, J. Flannery +5 more
2018Transboundary and Emerging Diseases21 citations Open access
Semantic Scholar
Development of a Novel Reverse Transcription Loop‐Mediated Isothermal Amplification Assay for the Rapid Detection of African Horse Sickness Virus
V. Fowler, E. Howson, J. Flannery, M. Romito +6 more
2016Transboundary and Emerging Diseases21 citations Open access
Semantic Scholar
A rapid RT-LAMP assay for the detection of all four lineages of Peste des Petits Ruminants Virus
P. Rajko-Nenow, J. Flannery, H. Arnold, E. Howson +4 more
2019Journal of Virological Methods16 citations Open access
Semantic Scholar
Origin of Bluetongue Virus Serotype 8 Outbreak in Cyprus, September 2016
P. Rajko-Nenow, Vasiliki Christodoulou, William Thurston, Honorata M. Ropiak +7 more
2020Viruses15 citations Open access
Semantic Scholar
Improved PCR diagnostics using up-to-date in silico validation: An F-gene RT-qPCR assay for the detection of all four lineages of peste des petits ruminants virus
J. Flannery, P. Rajko-Nenow, H. Arnold, E. van Weezep +3 more
2019Journal of Virological Methods15 citations Open access
Semantic Scholar
Investigation of the First African Swine Fever Outbreak in a Domestic Pig Farm in Hong Kong
Y. Go, J. Ho, Karina W S Tam, M. Kamali +15 more
2023Transboundary and Emerging Diseases13 citations Open access
Semantic Scholar
Complete Coding Sequence of a Novel Bluetongue Virus Isolated from a Commercial Sheeppox Vaccine
P. Rajko-Nenow, N. Golender, V. Bumbarov, Hannah Brown +5 more
2020Microbiology Resource Announcements13 citations Open access
Semantic Scholar
A field study evaluating the humoral immune response in Mongolian sheep vaccinated against sheeppox virus.
P. Fay, G. Limon, Gerelmaa Ulziibat, Buyantogtokh Khanui +7 more
2021Transboundary and Emerging Diseases12 citations Open access
Semantic Scholar
Identification of a BTV-Strain-Specific Single Gene That Increases Culicoides Vector Infection Rate
Honorata M. Ropiak, Simon King, Marc Guimerà Busquets, Kerry Newbrook +7 more
2021Viruses12 citations Open access
Semantic Scholar
Assessment of reproducibility of a VP7 Blocking ELISA diagnostic test for African horse sickness
M. Durán-Ferrer, M. Agüero, S. Zientara, C. Beck +19 more
2018Transboundary and Emerging Diseases12 citations Open access
Semantic Scholar
A random priming amplification method for whole genome sequencing of SARS-CoV-2 virus
K. Chrzastek, Chandana Tennakoon, D. Bialy, Graham L. Freimanis +2 more
2022BMC Genomics10 citations Open access
Semantic Scholar
Evaluating the most appropriate pooling ratio for EDTA blood samples to detect Bluetongue virus using real-time RT-PCR
J. Flannery, P. Rajko-Nenow, H. Hicks, H. Hill +2 more
2018Veterinary Microbiology10 citations Open access
Semantic Scholar
Complete Genome Sequence of Peste des Petits Ruminants Virus from Georgia, 2016
P. Rajko-Nenow, Tabitha G. Cunliffe, J. Flannery, Honorata M. Ropiak +4 more
2017Genome Announcements10 citations Open access
Semantic Scholar
The Effect of Temperature on the Stability of African Swine Fever Virus BA71V Isolate in Environmental Water Samples
Eleni-Anna Loundras, C. Netherton, J. Flannery, M. Bowes +2 more
2023Pathogens9 citations Open access
Semantic Scholar
Identification of novel testing matrices for African swine fever surveillance
J. Flannery, Martin Ashby, Rebecca Moore, Sian Wells +3 more
2020Journal of Veterinary Diagnostic Investigation8 citations Open access
Semantic Scholar
BTV-14 Infection in Sheep Elicits Viraemia with Mild Clinical Symptoms
J. Flannery, L. Frost, P. Fay, H. Hicks +6 more
2020Microorganisms8 citations Open access
Semantic Scholar
Detection of a novel reassortant epizootic hemorrhagic disease virus serotype 6 in cattle in Trinidad, West Indies, containing nine RNA segments derived from exotic EHDV strains with an Australian origin
P. Rajko-Nenow, T. Brown-Joseph, Chandana Tennakoon, J. Flannery +2 more
2019Infection, Genetics and Evolution8 citations Open access
Semantic Scholar
Bluetongue virus infection in naïve cattle: Identification of circulating serotypes and associated Culicoides biting midge species in Trinidad
Tamiko Brown-Joseph, C. Batten, Lara E. Harrup, L. Frost +6 more
2017Veterinary Microbiology8 citations Open access
Semantic Scholar
Specific T-cell subsets have a role in anti-viral immunity and pathogenesis but not viral dynamics or onwards vector transmission of an important livestock arbovirus
Kerry Newbrook, N. Khan, A. Fisher, K. Chong +14 more
2024Frontiers in Immunology7 citations Open access
Semantic Scholar
Towards a Sampling Rationale for African Swine Fever Virus Detection in Pork Products
J. Flannery, Rebecca Moore, Laura Marsella, Katie Harris +5 more
2020Foods7 citations Open access
Semantic Scholar
Evaluation of the Delivery of a Live Attenuated Porcine Reproductive and Respiratory Syndrome Virus as a Unit Solid Dose Injectable Vaccine
Ellie Hayhurst, Emily Rose, M. Pedrera, J. Edwards +9 more
2022Vaccines6 citations Open access
Semantic Scholar
Risk-based surveillance for bluetongue virus in cattle on the south coast of England in 2017 and 2018
K. Grace, C. Papadopoulou, T. Floyd, R. Avigad +6 more
2020The Veterinary Record6 citations Open access
Semantic Scholar
Complete Genome Sequence of a Lineage IV Peste des Petits Ruminants Virus from Turkey, 2018
S. Hacıoğlu, Simon King, Ş. Çizmeci, Öznur Yeşil +4 more
2020Microbiology Resource Announcements5 citations Open access
Semantic Scholar
Re-emergence of BTV serotype 4 in North Macedonia, July 2020.
J. Flannery, Simon King, P. Rajko-Nenow, Zagorka Popova +3 more
2020Transboundary and Emerging Diseases5 citations Open access
Semantic Scholar
Simultaneous Detection of Bluetongue Virus Serotypes Using xMAP Technology
Martin Ashby, P. Rajko-Nenow, C. Batten, J. Flannery
2020Microorganisms4 citations Open access
Semantic Scholar
Preliminary results from a survey of oyster production areas in Ireland for norovirus
S. Keaveney, J. Flannery, F. Guilfoyle, J. Doré
20074 citations
Semantic Scholar
Detection of human viruses in shellfish and update on REDRISK research project, Clew Bay, Co. Mayo
S. Keaveney, F. Guilfoyle, J. Flannery, B. Doré
20063 citations
Semantic Scholar
REDRISK: reduction of the virus risk in shellfish harvesting areas
Fergal Guilfoyle, S. Keaveney, J. Flannery, B. Doré
20063 citations
Semantic Scholar
A random priming amplification method for whole genome sequencing of SARS-CoV-2 and H1N1 influenza A virus
K. Chrzastek, Chandana Tennakoon, D. Bialy, Graham L. Freimanis +2 more
2021bioRxiv2 citations Open access
Semantic Scholar
Development of a Novel Loop Mediated Isothermal Amplification Assay (LAMP) for the Rapid Detection of Epizootic Haemorrhagic Disease Virus
P. Rajko-Nenow, E. Howson, D. Clark, Natasha Hilton +4 more
2021Viruses2 citations Open access
Semantic Scholar
Development of real-time RT-qPCR assays for the typing of two novel bluetongue virus genotypes derived from sheeppox vaccine
Simon King, J. Flannery, C. Batten, P. Rajko-Nenow
2021Journal of Virological Methods1 citations Open access
Semantic Scholar
Designing a Multiplex PCR-xMAP Assay for the Detection and Differentiation of African Horse Sickness Virus, Serotypes 1–9
Martin Ashby, Rebecca Moore, Simon King, Kerry Newbrook +2 more
2024Microorganisms0 citations Open access
Semantic Scholar
Laboratory Diagnosis and Quantification of African Swine Fever Virus Using Real-Time Polymerase Chain Reaction.
C. Netherton, L. Goatley, J. Flannery, Martin Ashby +1 more
2022Methods in molecular biology0 citations
Semantic Scholar
Supplementary Table 1 Mean ELISA S/P% value and real-time RT-PCR Ct values
J. Flannery
20200 citations
Semantic Scholar
Re-emergence of BTV serotype 4 in North Macedonia, July 2020
J. Flannery, Simon King, P. Rajko-Nenow, Zagorka Popova +3 more
2020bioRxiv0 citations Open access
Semantic Scholar
Comparison of the immunogenicity and cross-lineage efficacy of live attenuated peste des 1 petits ruminants virus vaccines
Sophia Hodgson, Katy Moffat, H. Hill, J. Flannery +3 more
20180 citations
Semantic Scholar
20th International BioInformatics Workshop on Virus Evolution and Molecular Epidemiology
G. Pinchbeck, S. Bonner, S. Dawson, J. Daly +16 more
2016Virus Evolution0 citations Open access
Semantic Scholar

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