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A. Scherl · SciRah

Researcher profile · Semantic Scholar

A. Scherl

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A. Scherl — researcher profile on SciRah

h-index: 29
Works: 78
Citations: 3,235

Most-cited papers

Functional proteomic analysis of human nucleolus.
A. Scherl, Y. Couté, C. Déon, A. Callé +5 more
2002Molecular Biology of the Cell482 citations Open access
Semantic Scholar
A panel of cerebrospinal fluid potential biomarkers for the diagnosis of Alzheimer's disease
O. Carrette, I. Demalte, A. Scherl, O. Yalkinoglu +4 more
2003Proteomics348 citations Open access
Semantic Scholar
PAcIFIC: how to dive deeper into the proteomics ocean
A. Panchaud, A. Scherl, S. Shaffer, Priska D. von Haller +3 more
2009Analytical Chemistry259 citations Open access
Semantic Scholar
Exploring glycopeptide-resistance in Staphylococcus aureus: a combined proteomics and transcriptomics approach for the identification of resistance-related markers
A. Scherl, P. François, Yvan Charbonnier, J. Deshusses +16 more
2006BMC Genomics133 citations Open access
Semantic Scholar
Cystatin C as a potential cerebrospinal fluid marker for the diagnosis of Creutzfeldt‐Jakob disease
Jean-Charles Sanchez, E. Guillaume, P. Lescuyer, L. Allard +6 more
2004Proteomics110 citations Open access
Semantic Scholar
Combining low- and high-energy tandem mass spectra for optimized peptide quantification with isobaric tags.
L. Dayon, C. Pasquarello, C. Hoogland, Jean-Charles Sanchez +1 more
2010Journal of Proteomics108 citations Open access
Semantic Scholar
Translation of pre-spliced RNAs in the nuclear compartment generates peptides for the MHC class I pathway
S. Apcher, G. Millot, Chrysoula Daskalogianni, A. Scherl +2 more
2013Proceedings of the National Academy of Sciences of the United States of America103 citations Open access
Semantic Scholar
Daptomycin resistance mechanisms in clinically derived Staphylococcus aureus strains assessed by a combined transcriptomics and proteomics approach.
A. Fischer, Soo-Jin Yang, A. Bayer, A. Vaezzadeh +9 more
2011Journal of Antimicrobial Chemotherapy101 citations Open access
Semantic Scholar
Genome-specific gas-phase fractionation strategy for improved shotgun proteomic profiling of proteotypic peptides.
A. Scherl, S. Shaffer, Greg Taylor, H. Kulasekara +2 more
2008Analytical Chemistry90 citations Open access
Semantic Scholar
Exploitation of specific properties of trifluoroethanol for extraction and separation of membrane proteins
J. Deshusses, J. Burgess, A. Scherl, Y. Wenger +6 more
2003Proteomics78 citations Open access
Semantic Scholar
Characterization of protein crosslinks via mass spectrometry and an open-modification search strategy
Pragya Singh, S. Shaffer, A. Scherl, Carol Holman +6 more
2008Analytical Chemistry73 citations Open access
Semantic Scholar
EasyProt--an easy-to-use graphical platform for proteomics data analysis.
Florent Gluck, C. Hoogland, Paola Antinori, X. Robin +11 more
2013Journal of Proteomics70 citations Open access
Semantic Scholar
Correlation of proteomic and transcriptomic profiles of Staphylococcus aureus during the post-exponential phase of growth.
A. Scherl, P. François, Manuela Bento, J. Deshusses +11 more
2005Journal of Microbiological Methods67 citations Open access
Semantic Scholar
Glycation Isotopic Labeling with 13C-Reducing Sugars for Quantitative Analysis of Glycated Proteins in Human Plasma*
F. Priego-Capote, A. Scherl, Markus Müller, P. Waridel +2 more
2009Molecular & Cellular Proteomics66 citations Open access
Semantic Scholar
Proteomic approaches to study Staphylococcus aureus pathogenesis.
P. François, A. Scherl, D. Hochstrasser, J. Schrenzel
2010Journal of Proteomics62 citations Open access
Semantic Scholar
Clinical protein mass spectrometry.
A. Scherl
2015Methods59 citations
Semantic Scholar
Applications of mass spectrometry for quantitative protein analysis in formalin-fixed paraffin-embedded tissues
Carine Steiner, A. Ducret, J. Tille, Marlène Thomas +5 more
2014Proteomics59 citations Open access
Semantic Scholar
Precursor ion independent algorithm for top-down shotgun proteomics
Yi-Hsuan S. Tsai, A. Scherl, J. L. Shaw, C. Mackay +3 more
2009Journal of the American Society for Mass Spectrometry59 citations Open access
Semantic Scholar
Quantitative Clinical Chemistry Proteomics (qCCP) using mass spectrometry: general characteristics and application
S. Lehmann, A. Hoofnagle, D. Hochstrasser, C. Brede +7 more
2013Clinical Chemistry and Laboratory Medicine58 citations Open access
Semantic Scholar
Isobaric tagging-based selection and quantitation of cerebrospinal fluid tryptic peptides with reporter calibration curves.
L. Dayon, N. Turck, S. Kienle, P. Schulz-Knappe +3 more
2010Analytical Chemistry54 citations Open access
Semantic Scholar
Tumor protein D52 (TPD52): a novel B-cell/plasma-cell molecule with unique expression pattern and Ca(2+)-dependent association with annexin VI.
E. Tiacci, P. Orvietani, B. Bigerna, A. Pucciarini +19 more
2005Blood50 citations Open access
Semantic Scholar
Discovery and Verification of Osteopontin and Beta-2-microglobulin as Promising Markers for Staging Human African Trypanosomiasis*
N. Tiberti, A. Hainard, V. Lejon, X. Robin +8 more
2010Molecular & Cellular Proteomics48 citations Open access
Semantic Scholar
On the benefits of acquiring peptide fragment ions at high measured mass accuracy
A. Scherl, S. Shaffer, Greg Taylor, Patricia Hernandez +3 more
2008Journal of the American Society for Mass Spectrometry46 citations Open access
Semantic Scholar
IgM are associated to Spα (CD5 antigen‐like)
J. Tissot, Jean-Charles Sanchez, F. Vuadens, A. Scherl +4 more
200245 citations Open access
Semantic Scholar
Identification and characterization of biomarkers of organophosphorus exposures in humans.
Jerry H. Kim, R. Stevens, M. MacCoss, D. Goodlett +4 more
2010Advances in Experimental Medicine and Biology39 citations Open access
Semantic Scholar
Gold coating of non-conductive membranes before matrix-assisted laser desorption/ionization tandem mass spectrometric analysis prevents charging effect.
A. Scherl, C. Zimmermann-Ivol, J. Di Dio, A. Vaezzadeh +6 more
2005Rapid Communications in Mass Spectrometry37 citations Open access
Semantic Scholar
Nonredundant mass spectrometry: A strategy to integrate mass spectrometry acquisition and analysis
A. Scherl, P. François, V. Converset, Manuela Bento +5 more
2004Proteomics37 citations Open access
Semantic Scholar
Increasing information from shotgun proteomic data by accounting for misassigned precursor ion masses
A. Scherl, Yi-Hsuan S. Tsai, S. Shaffer, David R. Goodlett
2008Proteomics36 citations
Semantic Scholar
Repeated exposure to Ochratoxin A generates a neuroinflammatory response, characterized by neurodegenerative M1 microglial phenotype.
J. S. von Tobel, Paola Antinori, M. Zurich, R. Rosset +4 more
2014Neurotoxicology29 citations
Semantic Scholar
IgM are associated to Sp alpha (CD5 antigen-like).
J. Tissot, Jean-Charles Sanchez, F. Vuadens, A. Scherl +4 more
2002Electrophoresis29 citations
Semantic Scholar
A Distinct Urinary Biomarker Pattern Characteristic of Female Fabry Patients That Mirrors Response to Enzyme Replacement Therapy
A. Kistler, J. Siwy, F. Breunig, P. Jeevaratnam +8 more
2011PLoS ONE27 citations Open access
Semantic Scholar
A systems wide mass spectrometric based linear motif screen to identify dominant in-vivo interacting proteins for the ubiquitin ligase MDM2.
J. Nicholson, A. Scherl, Luke Way, E. Blackburn +3 more
2014Cellular Signalling26 citations Open access
Semantic Scholar
Electron Transfer Dissociation Mass Spectrometry of Hemoglobin on Clinical Samples
Didia Coelho Graça, P. Lescuyer, Lorella Clerici, Y. O. Tsybin +5 more
2012Journal of the American Society for Mass Spectrometry24 citations Open access
Semantic Scholar
An improved method for the construction of decoy peptide MS/MS spectra suitable for the accurate estimation of false discovery rates
Erik Ahrné, Yuki Ohta, Frédéric Nikitin, A. Scherl +2 more
2011Proteomics24 citations
Semantic Scholar
Intact protein profiling in breast cancer biomarker discovery: Protein identification issue and the solutions based on 3D protein separation, bottom‐up and top‐down mass spectrometry
P. Bouchal, M. Dvorakova, A. Scherl, Spiros D. Garbis +2 more
2013Proteomics23 citations Open access
Semantic Scholar
STAT6 promotes bi-directional modulation of PKM2 in liver and adipose inflammatory cells in Rosiglitazone-treated mice
Tatjana Sajic, A. Hainard, A. Scherl, A. Wohlwend +3 more
2013Scientific Reports22 citations Open access
Semantic Scholar
Development of a fluorescent monoclonal antibody‐based assay to measure the allosteric effects of synthetic peptides on self‐oligomerization of AGR2 protein
T. Gray, E. Murray, M. Nowicki, Lucy Remnant +4 more
2013Protein Science22 citations Open access
Semantic Scholar
Quantitative Shotgun Proteomics Unveils Candidate Novel Esophageal Adenocarcinoma (EAC)-specific Proteins *
J. R. O'Neill, Hui-Song Pak, E. Pairo-Castineira, V. Save +6 more
2017Molecular & Cellular Proteomics21 citations Open access
Semantic Scholar
Immediate and delayed effects of subchronic Paraquat exposure during an early differentiation stage in 3D-rat brain cell cultures.
Jenny Sandström von Tobel, D. Zoia, J. Althaus, Paola Antinori +4 more
2014Toxicology Letters21 citations Open access
Semantic Scholar
Characterization of the AGR2 Interactome Uncovers New Players of Protein Disulfide Isomerase Network in Cancer Cells
Pavla Bouchalova, Lucia Sommerová, D. Potěšil, Andrea Martisova +8 more
2021Molecular & Cellular Proteomics19 citations Open access
Semantic Scholar
Clustering and Filtering Tandem Mass Spectra Acquired in Data-Independent Mode
Hui-Song Pak, Frédéric Nikitin, Florent Gluck, F. Lisacek +2 more
2013Journal of the American Society for Mass Spectrometry18 citations Open access
Semantic Scholar
Human hemolysate glycated proteome.
F. Priego-Capote, M. Ramírez-Boo, C. Hoogland, A. Scherl +3 more
2011Analytical Chemistry17 citations Open access
Semantic Scholar
From relative to absolute quantification of tryptic peptides with tandem mass tags: application to cerebrospinal fluid.
L. Dayon, N. Turck, A. Scherl, D. Hochstrasser +2 more
2010Chimia (Basel)17 citations Open access
Semantic Scholar
Comparison of a Salmonella typhimurium proteome defined by shotgun proteomics directly on an LTQ-FT and by proteome pre-fractionation on an LCQ-DUO.
B. Nunn, S. Shaffer, A. Scherl, B. Gallis +3 more
2006Briefings in Functional Genomics & Proteomics17 citations Open access
Semantic Scholar
Identification of hemoglobin variants by top-down mass spectrometry using selected diagnostic product ions
Didia Coelho Graça, R. Hartmer, W. Jabs, P. Beris +7 more
2015Analytical and Bioanalytical Chemistry16 citations Open access
Semantic Scholar
Multicenter experiment for quality control of peptide-centric LC-MS/MS analysis - A longitudinal performance assessment with nLC coupled to orbitrap MS analyzers.
A. Campos, R. Díaz, S. Martínez-Bartolomé, J. Sierra +15 more
2015Journal of Proteomics15 citations Open access
Semantic Scholar
Quantitative mass spectrometry analysis of intact hemoglobin A2 by precursor ion isolation and detection.
Adelina E. Acosta-Martin, Didia Coelho Graça, Paola Antinori, Lorella Clerici +6 more
2013Analytical Chemistry15 citations Open access
Semantic Scholar
Proteomic approach to investigate MRSA.
P. François, A. Scherl, D. Hochstrasser, J. Schrenzel
2007Methods in molecular biology11 citations
Semantic Scholar
Clinical method evaluation of hemoglobin S and C identification by top-down selected reaction monitoring and electron transfer dissociation
O. Lassout, R. Hartmer, W. Jabs, Lorella Clerici +7 more
2019Clinical Proteomics6 citations Open access
Semantic Scholar
Identification of human, rat and chicken ribosomal proteins by a combination of two-dimensional polyacrylamide gel electrophoresis and mass spectrometry.
Anh Thu Nguyen-Lefebvre, S. Gonin-Giraud, A. Scherl, Patrizia Arboit +5 more
2011Journal of Proteomics6 citations Open access
Semantic Scholar

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