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J. Rui · SciRah

Researcher profile · Semantic Scholar

J. Rui

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J. Rui — researcher profile on SciRah

h-index: 29
Works: 67
Citations: 3,706

Most-cited papers

Reduced microbial stability in the active layer is associated with carbon loss under alpine permafrost degradation
Ming-Hui Wu, Sheng-Yun Chen, Jian-Wei Chen, Kai Xue +8 more
2021Proceedings of the National Academy of Sciences of the United States of America379 citations Open access
Semantic Scholar
Dynamics of the bacterial community structure in the rhizosphere of a maize cultivar
Xiang-Zhen Li, J. Rui, Yuejian Mao, A. Yannarell +1 more
2014358 citations
Semantic Scholar
Succession of Bacterial Populations during Plant Residue Decomposition in Rice Field Soil
J. Rui, Jingjing Peng, Ya-Hai Lu
2009Applied and Environmental Microbiology213 citations Open access
Semantic Scholar
Rate-specific responses of prokaryotic diversity and structure to nitrogen deposition in the Leymus chinensis steppe
Min-Jie Yao, J. Rui, Jia-Bao Li, Yu-Mei Dai +10 more
2014207 citations Open access
Semantic Scholar
Functional Potential of Soil Microbial Communities in the Maize Rhizosphere
Xiang-Zhen Li, J. Rui, Jing-Bo Xiong, Jia-Bao Li +4 more
2014PLoS ONE188 citations Open access
Semantic Scholar
Prokaryotic Communities in Pit Mud from Different-Aged Cellars Used for the Production of Chinese Strong-Flavored Liquor
Y. Tao, Jia-Bao Li, J. Rui, Zhan-Cheng Xu +6 more
2014Applied and Environmental Microbiology169 citations Open access
Semantic Scholar
Dynamics of the Methanogenic Archaeal Community during Plant Residue Decomposition in an Anoxic Rice Field Soil
Jingjing Peng, Zhe Lu, J. Rui, Ya-Hai Lu
2008Applied and Environmental Microbiology168 citations Open access
Semantic Scholar
Bacterial community succession and metabolite changes during doubanjiang-meju fermentation, a Chinese traditional fermented broad bean (Vicia faba L.) paste.
Zhi-Hua Li, J. Rui, Xiang-Zhen Li, Jia-Bao Li +8 more
2017Food Chemistry136 citations Open access
Semantic Scholar
The core populations and co-occurrence patterns of prokaryotic communities in household biogas digesters
J. Rui, Jia-Bao Li, Shiheng Zhang, Xuefeng Yan +2 more
2015Biotechnology for Biofuels126 citations Open access
Semantic Scholar
Responses of Bacterial Communities to Simulated Climate Changes in Alpine Meadow Soil of the Qinghai-Tibet Plateau
J. Rui, Jia-Bao Li, Shiping Wang, Jiaxing An +5 more
2015Applied and Environmental Microbiology123 citations Open access
Semantic Scholar
Soil bacterial community structure in Chinese wetlands
Jiaxing An, Chi Liu, Qian Wang, Min-Jie Yao +3 more
2019Geoderma116 citations
Semantic Scholar
The responses and adaptations of microbial communities to salinity in farmland soils: a molecular ecological network analysis.
Wei Zheng, D. Xue, Xiang-Zhen Li, Ye Deng +3 more
2017109 citations Open access
Semantic Scholar
The differentiation of soil bacterial communities along a precipitation and temperature gradient in the eastern Inner Mongolia steppe
Min-Jie Yao, J. Rui, Hai-Shan Niu, Petr Hědenec +5 more
2017106 citations Open access
Semantic Scholar
Temperature regulates deterministic processes and the succession of microbial interactions in anaerobic digestion process.
Q. Lin, J. de Vrieze, Chao-Nan Li, Jia-Ying Li +8 more
2017Water Research102 citations
Semantic Scholar
Substrate Type and Free Ammonia Determine Bacterial Community Structure in Full-Scale Mesophilic Anaerobic Digesters Treating Cattle or Swine Manure
Jia-Bao Li, J. Rui, Min-Jie Yao, Shiheng Zhang +4 more
2015Frontiers in Microbiology100 citations Open access
Semantic Scholar
Syntrophic Oxidation of Propionate in Rice Field Soil at 15 and 30°C under Methanogenic Conditions
Yan-Lu Gan, Qiong-Fen Qiu, Peng-Fei Liu, J. Rui +1 more
2012Applied and Environmental Microbiology84 citations Open access
Semantic Scholar
Long-term nitrogen addition affects the phylogenetic turnover of soil microbial community responding to moisture pulse
Chi Liu, Min-Jie Yao, J. Stegen, J. Rui +2 more
2017Scientific Reports81 citations Open access
Semantic Scholar
Straw- and slurry-associated prokaryotic communities differ during co-fermentation of straw and swine manure
Jia-Bao Li, J. Rui, Zhao-Jun Pei, Xiaori Sun +6 more
2014Applied Microbiology and Biotechnology76 citations
Semantic Scholar
Microorganism-regulated mechanisms of temperature effects on the performance of anaerobic digestion
Q. Lin, Guihua He, J. Rui, X. Fang +3 more
2016Microbial Cell Factories72 citations Open access
Semantic Scholar
Syntrophic acetate oxidation under thermophilic methanogenic condition in Chinese paddy field soil.
J. Rui, Qiong-Fen Qiu, Ya-Hai Lu
2011FEMS Microbiology Ecology66 citations Open access
Semantic Scholar
Complete genome sequence of Ruminococcaceae bacterium CPB6: A newly isolated culture for efficient n-caproic acid production from lactate.
Y. Tao, Xiao-Yu Zhu, Hanzhong Wang, Yi Wang +3 more
2017Journal of Biotechnology55 citations
Semantic Scholar
High concentrations of bioavailable heavy metals impact freshwater sediment microbial communities
Cai-Ying Ni, D. Horton, J. Rui, M. Henson +3 more
2016Annals of Microbiology53 citations Open access
Semantic Scholar
Enrichment and dynamics of novel syntrophs in a methanogenic hexadecane-degrading culture from a Chinese oilfield.
Lei Cheng, J. Rui, Qiang Li, Hui Zhang +1 more
2013FEMS Microbiology Ecology52 citations
Semantic Scholar
Soil bacterial community shifts driven by restoration time and steppe types in the degraded steppe of Inner Mongolia
Min-Jie Yao, J. Rui, Jia-Bao Li, Jun-Ming Wang +2 more
201850 citations
Semantic Scholar
Soil bacterial community mediates the effect of plant material on methanogenic decomposition of soil organic matter
Q. Yuan, Marcela Hernández, M. Dumont, J. Rui +2 more
201842 citations Open access
Semantic Scholar
Coexistence and competition of sulfate-reducing and methanogenic populations in an anaerobic hexadecane-degrading culture
T. Ma, Lai-Yan Liu, J. Rui, Q. Yuan +6 more
2017Biotechnology for Biofuels42 citations Open access
Semantic Scholar
Different Selectivity in Fungal Communities Between Manure and Mineral Fertilizers: A Study in an Alkaline Soil After 30 Years Fertilization
Ying Wang, Hong-Fei Ji, Ya-Xian Hu, Rui Wang +2 more
2018Frontiers in Microbiology34 citations Open access
Semantic Scholar
Dark carbon fixation and chemolithotrophic microbial community in surface sediments of the cascade reservoirs, Southwest China.
Yuan Zhao, Peng-Fei Liu, J. Rui, Lei Cheng +3 more
2020Science of the Total Environment31 citations
Semantic Scholar
Community assemblage of free-living diazotrophs along the elevational gradient of Mount Gongga
Yansu Wang, Chao-Nan Li, Ze-Hao Shen, J. Rui +3 more
2019Soil Ecology Letters31 citations Open access
Semantic Scholar
Altitudinal niches of symbiotic, associative and free-living diazotrophs driven by soil moisture and temperature in the alpine meadow on the Tibetan Plateau.
J. Rui, Jingjing Hu, Fu-Xin Wang, Yuwei Zhao +1 more
2022Environmental Research29 citations
Semantic Scholar
Gut region influences the diversity and interactions of bacterial communities in pikas (Ochotona curzoniae and Ochotona daurica)
Huan Li, Tong-Tong Li, Aileen Berasategui, J. Rui +4 more
2017FEMS Microbiology Ecology28 citations Open access
Semantic Scholar
Roots and microbiome jointly drive the distributions of 17 phytohormones in the plant soil continuum in a phytohormone‐specific manner
Yu-Qiu Lu, En-Zhao Wang, Zhi-Yu Tang, J. Rui +7 more
2021Plant and Soil27 citations
Semantic Scholar
Ambient temperature alters body size and gut microbiota of Xenopus tropicalis
Jia-Ying Li, J. Rui, Yulong Li, Na Tang +3 more
2019Science China Life Sciences27 citations Open access
Semantic Scholar
Archaeal communities in the sediments of different mangrove stands at Dongzhaigang, China
Wei Li, W. Guan, Huai Chen, Bao-Wen Liao +6 more
2016Journal of Soils and Sediments27 citations Open access
Semantic Scholar
Effect of dry-rewetting stress on response pattern of soil prokaryotic communities in alpine meadow soil
Petr Hědenec, D. Singer, Jia-Bao Li, Min-Jie Yao +7 more
201824 citations
Semantic Scholar
Functional and phylogenetic response of soil prokaryotic community under an artificial moisture gradient
Petr Hědenec, J. Rui, Q. Lin, Min-Jie Yao +4 more
201723 citations
Semantic Scholar
Elevational pattern of soil organic carbon release in a Tibetan alpine grassland: Consequence of quality but not quantity of initial soil organic carbon
Meng Guo, Bo Zhao, Yang Wen, Jingjing Hu +6 more
2022Geoderma20 citations Open access
Semantic Scholar
Research progress in biochemical pathways of methanogenesis
Xiao-Yu Fang, Jia-Bao Li, Xiang-Zhen Li, J. Rui
2015Chinese Journal of Applied and Environmental Biology18 citations Open access
Semantic Scholar
Soil water content and pH drive archaeal distribution patterns in sediment and soils of water-level-fluctuating zones in the East Dongting Lake wetland, China
Wei Li, D. Feng, Gang Yang, Zheng-Miao Deng +2 more
2019Environmental science and pollution research international15 citations
Semantic Scholar
Ammonium inhibition through the decoupling of acidification process and methanogenesis in anaerobic digester revealed by high throughput sequencing
Miao-Miao Zhang, Q. Lin, J. Rui, Jia-Bao Li +1 more
2017Biotechnology Letters15 citations Open access
Semantic Scholar
Complete genome sequence of Agarivorans gilvus WH0801(T), an agarase-producing bacterium isolated from seaweed.
Pu-Juan Zhang, J. Rui, Zong-Jun Du, Chang-Hu Xue +2 more
2016Journal of Biotechnology13 citations Open access
Semantic Scholar
Altitudinal patterns of alpine soil ammonia-oxidizing community structure and potential nitrification rate
Yuwei Zhao, Ning Ling, Xiang Liu, Chao Li +3 more
2024Applied and Environmental Microbiology12 citations Open access
Semantic Scholar
Methane production from rice straw carbon in five different methanogenic rice soils: rates, quantities and microbial communities
Q. Yuan, Xiao-Zhen Huang, J. Rui, Shao-Jun Qiu +1 more
2019Acta Geochimica11 citations
Semantic Scholar
Increased methane concentration alters soil prokaryotic community structure along an artificial pH gradient
Petr Hědenec, R. Angel, Q. Lin, J. Rui +1 more
2019Annals of Microbiology9 citations Open access
Semantic Scholar
The applications of the 16S rRNA gene in microbial ecology: current situation and problems
Chi Liu, Jia-Bao Li, J. Rui, Jiaxing An +1 more
20159 citations
Semantic Scholar
Elevational distribution and seasonal dynamics of alpine soil prokaryotic communities
J. Rui, Yuwei Zhao, Nan Cong, Fuxin Wang +5 more
2023Frontiers in Microbiology8 citations Open access
Semantic Scholar
Variation in the Soil Prokaryotic Community Under Simulated Warming and Rainfall Reduction in Different Water Table Peatlands of the Zoige Plateau
Wei Li, Huai Chen, Zhi-Ying Yan, Gang Yang +3 more
2020Frontiers in Microbiology8 citations Open access
Semantic Scholar
Prokaryotic community structures in biogas plants with swine manure
J. Rui, Ji-Jin Li, Jia-Bao Li, Yuan-Peng Wang +4 more
20146 citations
Semantic Scholar
Response of bacterial communities to short-term pyrene exposure in red soil
Jingjing Peng, Hong Li, Jian-Qiang Su, Qiufang Zhang +2 more
2013Frontiers of Environmental Science and Engineering5 citations
Semantic Scholar
Soil microclimate and vegetation dynamics shape elevational and seasonal variations of diazotrophic communities in alpine grasslands
J. Rui, Xiaojiang Long, Xuemiao Wang, Xinyu Xiong +1 more
2025Frontiers in Plant Science4 citations Open access
Semantic Scholar

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