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J. Stegen · SciRah

Researcher profile · Semantic Scholar

J. Stegen

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J. Stegen — researcher profile on SciRah

h-index: 51
Works: 213
Citations: 19K

Most-cited papers

A genomic catalog of Earth’s microbiomes
Stephen Nayfach, S. Roux, R. Seshadri, D. Udwary +263 more
2020Nature Biotechnology783 citations Open access
Semantic Scholar
Standardized multi-omics of Earth’s microbiomes reveals microbial and metabolite diversity
J. Shaffer, L. Nothias, L. Thompson, Jon G. Sanders +47 more
2022Nature Microbiology172 citations Open access
Semantic Scholar
Using metacommunity ecology to understand environmental metabolomes
R. Danczak, Rosalie K. Chu, S. Fansler, A. Goldman +4 more
2020Nature Communications157 citations Open access
Semantic Scholar
Distinct assembly mechanisms underlie similar biogeographical patterns of rare and abundant bacteria in Tibetan Plateau grassland soils.
Mukan Ji, W. Kong, J. Stegen, Lin-Yan Yue +4 more
2020Environmental Microbiology125 citations Open access
Semantic Scholar
Microbial and Environmental Processes Shape the Link between Organic Matter Functional Traits and Composition.
A. Hu, Kyoung-Soon Jang, Fanfan Meng, J. Stegen +5 more
2022Environmental Science and Technology116 citations
Semantic Scholar
Forfeiting the priority effect: turnover defines biofilm community succession
C. Brislawn, E. Graham, K. Dana, Peter Ihardt +6 more
2019The ISME Journal105 citations Open access
Semantic Scholar
Straw chemistry links the assembly of bacterial communities to decomposition in paddy soils
Y. Bao, Youzhi Feng, J. Stegen, Meng Wu +5 more
202094 citations Open access
Semantic Scholar
Representing Organic Matter Thermodynamics in Biogeochemical Reactions via Substrate-Explicit Modeling
Hyun-Seob Song, J. Stegen, E. Graham, Joon-Yong Lee +5 more
2020bioRxiv79 citations Open access
Semantic Scholar
Vertical Hydrologic Exchange Flows Control Methane Emissions from Riverbed Sediments.
Kewei Chen, Xing-Yuan Chen, J. Stegen, Jorge A. Villa +8 more
2023Environmental Science and Technology59 citations Open access
Semantic Scholar
Temperature drives local contributions to beta diversity in mountain streams: Stochastic and deterministic processes
Jianjun Wang, P. Legendre, Janne Soininen, Chih‐Fu Yeh +6 more
202057 citations
Semantic Scholar
Carbon limitation leads to thermodynamic regulation of aerobic metabolism
V. Garayburu-Caruso, J. Stegen, Hyun-Seob Song, Lupita Renteria +7 more
2020bioRxiv50 citations Open access
Semantic Scholar
Integrating field observations and process-based modeling to predict watershed water quality under environmental perturbations
Xing-Yuan Chen, Raymond M. Lee, D. Dwivedi, K. Son +7 more
202048 citations Open access
Semantic Scholar
Assembly of the Populus Microbiome Is Temporally Dynamic and Determined by Selective and Stochastic Factors
N. Dove, A. Veach, W. Muchero, Toni Wahl +3 more
2021Msphere43 citations Open access
Semantic Scholar
Using Community Science to Reveal the Global Chemogeography of River Metabolomes
V. Garayburu-Caruso, R. Danczak, J. Stegen, Lupita Renteria +10 more
2020bioRxiv41 citations Open access
Semantic Scholar
Integrated, Coordinated, Open, and Networked (ICON) Science to Advance the Geosciences: Introduction and Synthesis of a Special Collection of Commentary Articles
A. Goldman, Sujata R. Emani, L. Pérez‐Angel, Josué A. Rodríguez-Ramos +1 more
2021Earth and Space Science36 citations Open access
Semantic Scholar
Spatial and temporal variation in river corridor exchange across a 5th-order mountain stream network
A. Ward, S. Wondzell, N. Schmadel, S. Herzog +33 more
2019Hydrology and Earth System Sciences36 citations Open access
Semantic Scholar
Genome-Resolved Metaproteomics Decodes the Microbial and Viral Contributions to Coupled Carbon and Nitrogen Cycling in River Sediments
Josué A. Rodríguez-Ramos, M. Borton, Bridget B. McGivern, Garret Smith +10 more
2022bioRxiv35 citations Open access
Semantic Scholar
Building Cross-Site and Cross-Network Collaborations in Critical Zone Science
B. Arora, S. Kuppel, C. Wellen, C. Oswald +4 more
2023Journal of Hydrology33 citations Open access
Semantic Scholar
Methane and nitrous oxide porewater concentrations and surface fluxes of a regulated river.
Jorge A. Villa, Garret Smith, Yang Ju, Lupita Renteria +10 more
2020Science of the Total Environment31 citations Open access
Semantic Scholar
Distinct and Temporally Stable Assembly Mechanisms Shape Bacterial and Fungal Communities in Vineyard Soils
Stefano Larsen, D. Albanese, J. Stegen, P. Franceschi +7 more
2022Microbial Ecology30 citations Open access
Semantic Scholar
Ecological theory applied to environmental metabolomes reveals compositional divergence despite conserved molecular properties
R. Danczak, A. Goldman, Rosalie K. Chu, Jason G. Toyoda +9 more
2020bioRxiv30 citations Open access
Semantic Scholar
Coupled Biotic-Abiotic Processes Control Biogeochemical Cycling of Dissolved Organic Matter in the Columbia River Hyporheic Zone
Jane D. Fudyma, Rosalie K. Chu, Nathalia Graf Grachet, J. Stegen +1 more
2021Frontiers in Water25 citations Open access
Semantic Scholar
Disinfection byproducts formed during drinking water treatment reveal an export control point for dissolved organic matter in a subalpine headwater stream
L. Leonard, G. Vanzin, V. Garayburu-Caruso, Stephanie S. Lau +6 more
2022Water Research X24 citations Open access
Semantic Scholar
Ecohydrological decoupling under changing disturbances and climate
N. McDowell, K. Anderson-Teixeira, J. Biederman, D. Breshears +12 more
2023One Earth22 citations Open access
Semantic Scholar
Movement with meaning: integrating information into meta‐ecology
C. Little, Matteo Rizzuto, T. Luhring, Julia D. Monk +6 more
2022Oikos22 citations Open access
Semantic Scholar
RNA Viruses Linked to Eukaryotic Hosts in Thawed Permafrost
R. Wu, E. Bottos, Vincent G. Danna, J. Stegen +2 more
2022mSystems22 citations Open access
Semantic Scholar
Sample Identifiers and Metadata to Support Data Management and Reuse in Multidisciplinary Ecosystem Sciences
J. Damerow, C. Varadharajan, K. Boye, E. Brodie +22 more
2021Data Science Journal22 citations Open access
Semantic Scholar
Disturbance Triggers Non-Linear Microbe-Environment Feedbacks
A. Sengupta, S. Fansler, Rosalie K. Chu, R. Danczak +6 more
2020bioRxiv19 citations Open access
Semantic Scholar
Assessing Microbial Community Patterns During Incipient Soil Formation From Basalt
A. Sengupta, J. Stegen, A. Meira, Ya-Di Wang +7 more
2019Journal of Geophysical Research - Biogeosciences19 citations
Semantic Scholar
Antecedent conditions determine the biogeochemical response of coastal soils to seawater exposure
A. Sengupta, J. Stegen, B. Bond-Lamberty, A. Rivas-Ubach +7 more
202116 citations Open access
Semantic Scholar
Co-located contemporaneous mapping of morphological, hydrological, chemical, and biological conditions in a 5th-order mountain stream network, Oregon, USA
A. Ward, J. Zarnetske, V. Baranov, P. Blaen +33 more
2019Earth System Science Data16 citations Open access
Semantic Scholar
Exploring the determinants of organic matter bioavailability through substrate-explicit thermodynamic modeling
Firnaaz Ahamed, Y. You, A. Burgin, J. Stegen +2 more
2023Frontiers in Water15 citations Open access
Semantic Scholar
Potential bioavailability of representative pyrogenic organic matter compounds in comparison to natural dissolved organic matter pools
E. Graham, Hyun-Seob Song, S. Grieger, V. Garayburu-Caruso +3 more
2023Biogeosciences14 citations Open access
Semantic Scholar
Small streams dominate US tidal reaches and will be disproportionately impacted by sea-level rise.
J. Tagestad, N. Ward, D. Butman, J. Stegen
2020Science of the Total Environment14 citations Open access
Semantic Scholar
Distinct temporal diversity profiles for nitrogen cycling genes in a hyporheic microbiome
W. Nelson, E. Graham, A. Crump, S. Fansler +3 more
2020PLoS ONE14 citations Open access
Semantic Scholar
Special Collection on Open Collaboration Across Geosciences
A. Goldman, Sujata R. Emani, Lina P�rez-Angel, Josu� Rodr�guez-Ramos +2 more
202113 citations Open access
Semantic Scholar
Maximum respiration rates in hyporheic zone sediments are primarily constrained by organic carbon concentration and secondarily by organic matter chemistry
J. Stegen, V. Garayburu-Caruso, R. Danczak, A. Goldman +3 more
2023Biogeosciences12 citations Open access
Semantic Scholar
Organic Matter Transformations are Disconnected Between Surface Water and the Hyporheic Zone
J. Stegen, S. Fansler, M. Tfaily, V. Garayburu-Caruso +6 more
2022Biogeosciences12 citations Open access
Semantic Scholar
Localized basal area affects soil respiration temperature sensitivity in a coastal deciduous forest
S. Pennington, N. McDowell, J. Megonigal, J. Stegen +1 more
202012 citations Open access
Semantic Scholar
Active layer depth and soil properties impact specific leaf area variation and ecosystem productivity in a boreal forest
Carolyn G. Anderson, B. Bond-Lamberty, J. Stegen
2020PLoS ONE12 citations Open access
Semantic Scholar
Rethinking Aerobic Respiration in the Hyporheic Zone under Variation in Carbon and Nitrogen Stoichiometry
A. Tureţcaia, V. Garayburu-Caruso, M. Kaufman, R. Danczak +5 more
2023Environmental Science and Technology11 citations Open access
Semantic Scholar
Continental-scale niche differentiation of dominant topsoil archaea in drylands.
Wei-Gang Hu, Qing-Qing Hou, M. Delgado-Baquerizo, J. Stegen +13 more
2022Environmental Microbiology11 citations Open access
Semantic Scholar
Tree growth, transpiration, and water-use efficiency between shoreline and upland red maple (Acer rubrum) trees in a coastal forest
Wen-Zhi Wang, N. McDowell, S. Pennington, C. Grossiord +9 more
202011 citations Open access
Semantic Scholar
A hydrogeophysical framework to assess infiltration during a simulated ecosystem-scale flooding experiment
M. Adebayo, V. Bailey, Xing-Yuan Chen, A. Hopple +12 more
2023Journal of Hydrology10 citations Open access
Semantic Scholar
Riverine organic matter functional diversity increases with catchment size
R. Danczak, V. Garayburu-Caruso, Lupita Renteria, Sophia A. McKever +8 more
2023Frontiers in Water10 citations Open access
Semantic Scholar
Implications of sample treatment on characterization of riverine dissolved organic matter.
A. Nelson, Jason G. Toyoda, Rosalie K. Chu, N. Toliċ +7 more
2022Environmental Science: Processes & Impacts9 citations Open access
Semantic Scholar
It Takes a Village: Using a Crowdsourced Approach to Investigate Organic Matter Composition in Global Rivers Through the Lens of Ecological Theory
M. Borton, S. Collins, E. Graham, V. Garayburu-Caruso +4 more
2022Frontiers in Water9 citations Open access
Semantic Scholar
Advancing river corridor science beyond disciplinary boundaries with an inductive approach to catalyse hypothesis generation
A. Ward, A. Packman, S. Bernal, N. Brekenfeld +14 more
2022Hydrological Processes9 citations Open access
Semantic Scholar
A Flux Detection Probe to Quantify Dynamic Groundwater‐Surface Water Exchange in the Hyporheic Zone
J. Thomle, C. Strickland, T. Johnson, Yue Zhu +1 more
2020Ground Water9 citations
Semantic Scholar
Coordination and divergence in community assembly processes across co-occurring microbial groups separated by cell size
Xing-Hao Li, J. Stegen, Yu-He Yu, Jie Huang
2023Frontiers in Microbiology8 citations Open access
Semantic Scholar

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