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D. Mendez · SciRah

Researcher profile · Semantic Scholar

D. Mendez

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D. Mendez — researcher profile on SciRah

h-index: 9
Works: 37
Citations: 596

Most-cited papers

Untangling the sequence of events during the S2 → S3 transition in photosystem II and implications for the water oxidation mechanism
M. Ibrahim, T. Fransson, R. Chatterjee, M. Cheah +35 more
2020Proceedings of the National Academy of Sciences of the United States of America197 citations Open access
Semantic Scholar
Structural dynamics in the water and proton channels of photosystem II during the S2 to S3 transition
R. Hussein, M. Ibrahim, A. Bhowmick, Philippe Simon +30 more
2021Nature Communications122 citations Open access
Semantic Scholar
Chemical crystallography by serial femtosecond X-ray diffraction
Elyse A. Schriber, D. Paley, R. Bolotovsky, D. Rosenberg +24 more
2022Nature99 citations Open access
Semantic Scholar
High-viscosity injector-based pink-beam serial crystallography of microcrystals at a synchrotron radiation source
J. Martin-Garcia, Lan Zhu, D. Mendez, Ming-Yue Lee +17 more
2019IUCrJ44 citations Open access
Semantic Scholar
Observation of correlated X-ray scattering at atomic resolution
D. Mendez, T. Lane, Jongmin Sung, J. Sellberg +9 more
2014Philosophical Transactions of the Royal Society B: Biological Sciences30 citations Open access
Semantic Scholar
Segmented flow generator for serial crystallography at the European X-ray free electron laser
Austin Echelmeier, Jorvani Cruz Villarreal, M. Messerschmidt, Daihyun Kim +67 more
2020Nature Communications28 citations Open access
Semantic Scholar
Angular correlations of photons from solution diffraction at a free-electron laser encode molecular structure
D. Mendez, Herschel M. Watkins, Shenglan Qiao, K. Raines +9 more
2016IUCrJ19 citations Open access
Semantic Scholar
Real-Time XFEL Data Analysis at SLAC and NERSC: a Trial Run of Nascent Exascale Experimental Data Analysis
Johannes Blaschke, A. Brewster, D. Paley, D. Mendez +6 more
2021Concurrency and Computation18 citations Open access
Semantic Scholar
SAD phasing of XFEL data depends critically on the error model
A. Brewster, A. Bhowmick, R. Bolotovsky, D. Mendez +2 more
2019Acta Crystallographica Section D: Structural Biology12 citations Open access
Semantic Scholar
Anisotropic X-Ray Scattering of Transiently Oriented Water.
Kyung Hwan Kim, Alexander Späh, H. Pathak, Cheolhee Yang +16 more
2020Physical Review Letters9 citations Open access
Semantic Scholar
Observations of phase changes in monoolein during high viscous injection
D. Wells, P. Berntsen, E. Balaur, C. Kewish +34 more
2022Journal of Synchrotron Radiation7 citations Open access
Semantic Scholar
Beyond integration: modeling every pixel to obtain better structure factors from stills
D. Mendez, R. Bolotovsky, A. Bhowmick, A. Brewster +4 more
2020IUCrJ7 citations Open access
Semantic Scholar
Accelerating x‐ray tracing for exascale systems using Kokkos
Felix Wittwer, N. Sauter, D. Mendez, B. Poon +6 more
2022Concurrency and Computation3 citations Open access
Semantic Scholar
Leveraging Data Analytics, Business Intelligence, Artificial Intelligence, and Predictive Modeling to Foster Innovation, Strengthen Startups, Mitigate Operational Risks, and Accelerate Economic Growth in the United States
Oladotun Solomon, Fagbenle Emmanuel, J. Simon, D. Mendez
2025International Journal of Future Engineering Innovations1 citations
Semantic Scholar
Membrane Protein Dynamics Revealed by X-Ray Scattering with a Femtosecond Free-Electron Laser
T. Grant, Suchithranga M D C Perera, Leslie A. Salas-Estrada, A. Struts +22 more
20201 citations Open access
Semantic Scholar
The Effect of Magnesium on the Thermodynamics of Nucleic Acid Tertiary Contact Formation
Herschel M. Watkins, D. Mendez, D. Ratner, D. Herschlag +1 more
20141 citations Open access
Semantic Scholar
Ultrafast X-Rays Capture Retinal Traversing Conical Intersection in Rhodopsin
T. Grant, Suchithranga M D C Perera, Leslie A. Salas-Estrada, C. K. Menon +29 more
2026bioRxiv0 citations Open access
Semantic Scholar
Interpreting Macromolecular Diffraction Through Simulation
I. Young, D. Mendez, Billy K. Poon, Johannes P. Blaschke +3 more
2023Methods in Enzymology0 citations Open access
Semantic Scholar
Femtosecond dynamics of rhodopsin revealed by X-ray laser.
Michael F. Brown, T. Grant, Suchithranga M D C Perera, Leslie A. Salas-Estrada +11 more
2023Biophysical Journal0 citations Open access
Semantic Scholar
Functional dynamics of G-protein-coupled receptor shown by femtosecond X-ray scattering
Michael F. Brown, T. Grant, Suchithranga M D C Perera, Leslie A. Salas-Estrada +11 more
2022Biophysical Journal0 citations Open access
Semantic Scholar
Per-pixel XFEL diffraction data processing for wavelength deconvolution
I. Young, D. Mendez, R. Bolotovsky, A. Bhowmick +5 more
2022Acta Crystallographica Section A: Foundations and Advances0 citations Open access
Semantic Scholar
Chemical crystallography at XFELs: small-molecule structure determination at lightning fast speeds
A. Brewster, Elyse A. Schriber, D. Paley, R. Bolotovsky +6 more
2022Acta Crystallographica Section A: Foundations and Advances0 citations Open access
Semantic Scholar
RT XFEL structure of Photosystem II averaged across all S-states at 1.89 Angstrom resolution
R. Hussein, M. Ibrahim, A. Bhowmick, Philipp S. Simon +30 more
20210 citations
Semantic Scholar
Ultrafast Membrane Protein Dynamics Revealed by X-Ray Scattering with a Femtosecond Free-Electron Laser
T. Grant, Suchithranga M D C Perera, Leslie A. Salas-Estrada, A. Struts +11 more
2021Biophysical Journal0 citations Open access
Semantic Scholar
RT XFEL structure of dark-stable state of Photosystem II (0F, S1 rich) at 2.08 Angstrom
R. Hussein, M. Ibrahim, A. Bhowmick, Philipp S. Simon +30 more
20210 citations
Semantic Scholar
Rhodopsin's Ultra-Fast Activation Dynamics in Bilayer and Micelle Environments
Leslie A. Salas-Estrada, T. Grant, Suchithranga M D C Perera, A. Struts +22 more
20200 citations Open access
Semantic Scholar
Structure Determination of Active Full Length Human Taspase1: Towards Novel Anti-Cancer Therapeutics
Jose M. Garcia, Nirupa Nagaratnam, R. Jernigan, Gihan Ketawala +11 more
2019Biophysical Journal0 citations Open access
Semantic Scholar
Processing data from new XFELs in cctbx.xfel and DIALS
A. Brewster, A. Bhowmick, R. Bolotovsky, D. Mendez +1 more
2019Acta Crystallographica Section A: Foundations and Advances0 citations Open access
Semantic Scholar
Processing simultaneously collected MAD data from two closely spaced (90 eV) wavelengths measured at an X-ray free-electron laser
D. Mendez, W. Weis, A. Brunger, S. Wakatsuki +1 more
2019Acta Crystallographica Section A: Foundations and Advances0 citations Open access
Semantic Scholar
Using a supercomputer for massive parallel merging of XFEL reflections
R. Bolotovsky, A. Brewster, A. Bhowmick, D. Mendez +1 more
2019Acta Crystallographica Section A: Foundations and Advances0 citations Open access
Semantic Scholar
Study of Ultra-Fast Rhodopsin Activation Dynamics with Molecular Dynamics Simulations
L. Salas, D. Mendez, J. Meza-Aguilar, Suchithranga M D C Perera +8 more
2019Biophysical Journal0 citations Open access
Semantic Scholar
Nanoparticle twinning observed using correlated x-ray scattering at a free electron laser
D. Mendez, Herschel M. Watkins, D. Ratner, G. Schenk +1 more
20150 citations
Semantic Scholar
Correlated x-ray scattering, from nanoparticle solutions to proteins
D. Mendez, T. Lane, Jongmin Sung, Herschel M. Watkins +2 more
20140 citations
Semantic Scholar
Correlated scattering: probing atomic structure of molecules and nanoparticles
D. Mendez, T. Lane, Jongmin Sung, D. Ratner +2 more
20140 citations Open access
Semantic Scholar
Secondary Structure Elucidation via X-Ray Cross Correlation Analysis
T. Lane, D. Mendez, Jongmin Sung, D. Ratner +2 more
20140 citations Open access
Semantic Scholar
Solution measurements yield atomic scale resolution
D. Mendez, Jongmin Sung, D. Ratner, C. Levard +3 more
20130 citations
Semantic Scholar
Molecular Dynamics Simulation of Transmembrane Helix Dissociation
D. Mendez, Chen Liao, R. Renthal
20090 citations Open access
Semantic Scholar

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