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Fuki Gyoja · SciRah

Researcher profile · Semantic Scholar

Fuki Gyoja

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Fuki Gyoja — researcher profile on SciRah

h-index: 12
Works: 23
Citations: 1,331

Most-cited papers

Draft assembly of the Symbiodinium minutum nuclear genome reveals dinoflagellate gene structure.
E. Shoguchi, C. Shinzato, T. Kawashima, Fuki Gyoja +22 more
2013Current Biology515 citations Open access
Semantic Scholar
Draft Genome of the Pearl Oyster Pinctada fucata: A Platform for Understanding Bivalve Biology
T. Takeuchi, T. Kawashima, Ryo Koyanagi, Fuki Gyoja +22 more
2012DNA Research280 citations Open access
Semantic Scholar
Hemichordate genomes and deuterostome origins
O. Simakov, T. Kawashima, Ferdinand Marlétaz, J. Jenkins +57 more
2015Nature234 citations Open access
Semantic Scholar
Bivalve-specific gene expansion in the pearl oyster genome: implications of adaptation to a sessile lifestyle
T. Takeuchi, Ryo Koyanagi, Fuki Gyoja, Miyuki Kanda +15 more
2016Zoological Letters147 citations Open access
Semantic Scholar
A genomewide survey of bHLH transcription factors in the coral Acropora digitifera identifies three novel orthologous families, pearl, amber, and peridot
Fuki Gyoja, T. Kawashima, N. Satoh
2012Development, Genes and Evolution20 citations Open access
Semantic Scholar
A genome-wide survey of bHLH transcription factors in the Placozoan Trichoplax adhaerens reveals the ancient repertoire of this gene family in metazoan.
Fuki Gyoja
2014Gene19 citations
Semantic Scholar
Analysis of large scale expression sequenced tags (ESTs) from the anural ascidian, Molgula tectiformis.
Fuki Gyoja, Y. Satou, T. Shin-I, Y. Kohara +2 more
2007Developmental Biology19 citations Open access
Semantic Scholar
Basic helix‐loop‐helix transcription factors in evolution: Roles in development of mesoderm and neural tissues
Fuki Gyoja
2017Genesis18 citations Open access
Semantic Scholar
MarinegenomicsDB: An Integrated Genome Viewer for Community-Based Annotation of Genomes
Ryo Koyanagi, T. Takeuchi, K. Hisata, Fuki Gyoja +3 more
2013Zoological Science18 citations
Semantic Scholar
Evolutionary Aspects of Variability in bHLH Orthologous Families: Insights from the Pearl Oyster, Pinctada fucata
Fuki Gyoja, N. Satoh
2013Zoological Science15 citations
Semantic Scholar
Expression of a muscle determinant gene, macho-1, in the anural ascidian Molgula tectiformis
Fuki Gyoja
2006Development, Genes and Evolution15 citations
Semantic Scholar
A chordate species lacking Nodal utilizes calcium oscillation and Bmp for left–right patterning
Takeshi A. Onuma, Momoko Hayashi, Fuki Gyoja, K. Kishi +2 more
2020Proceedings of the National Academy of Sciences of the United States of America13 citations Open access
Semantic Scholar
An Extensive Survey of Vertebrate-specific, Nonvisual Opsins Identifies a Novel Subfamily, Q113-Bistable Opsin
Fuki Gyoja, Keita Sato, Takahiro Yamashita, Takehiro G. Kusakabe
2025Genome Biology and Evolution7 citations Open access
Semantic Scholar
Functional diversification process of opsin genes for teleost visual and pineal photoreceptions
Chihiro Fujiyabu, Fuki Gyoja, Keita Sato, E. Kawano-Yamashita +3 more
2024Cellular and Molecular Life Sciences5 citations Open access
Semantic Scholar
Comparative single-cell transcriptomic analysis reveals putative differentiation drivers and potential origin of vertebrate retina
Xin Zeng, Fuki Gyoja, Yang Cui, Martin Loza +2 more
2024bioRxiv5 citations Open access
Semantic Scholar
Redundant mechanisms are involved in suppression of default cell fates during embryonic mesenchyme and notochord induction in ascidians.
H. Kodama, Y. Miyata, Mami Kuwajima, Ryoichi Izuchi +5 more
2016Developmental Biology4 citations Open access
Semantic Scholar
Spatial transcriptomics of Ciona adult brains reveals functional zonalization and insights into neural gland function
Xin Zeng, Fuki Gyoja, Ayana Maruo, Nanako Okawa +4 more
2026iScience0 citations Open access
Semantic Scholar
Spatial transcriptomic landscape of the Ciona adult brain: functional zonalisation and cellular composition in a sessile chordate brain and a novel insight into neural gland function
Xin Zeng, Fuki Gyoja, Ayana Maruo, Nanako Okawa +4 more
2026bioRxiv0 citations Open access
Semantic Scholar
Two piranha parietopsins illuminate opsin diversification in teleosts
Keita Sato, Takahiro Yamashita, Kazumi Sakai, Hideyo Ohuchi +2 more
2026BMC Biology0 citations Open access
Semantic Scholar
How opsins diversified after the teleost whole-genome duplication: Insights from two parietopsins of the red piranha, Pygocentrus nattereri
Keita Sato, Takahiro Yamashita, Kazumi Sakai, Hideyo Ohuchi +2 more
2026bioRxiv0 citations Open access
Semantic Scholar
Correction to: An Extensive Survey of Vertebrate-specific, Nonvisual Opsins Identifies a Novel Subfamily, Q113-Bistable Opsin
Fuki Gyoja, Keita Sato, Takahiro Yamashita, Takehiro G. Kusakabe
2025Genome Biology and Evolution0 citations Open access
Semantic Scholar
A genomewide survey of bHLH transcription factors in the coral Acropora digitifera identifies three novel orthologous families, pearl, amber, and peridot
Fuki Gyoja, T. Kawashima, N. Satoh
2012Development, Genes and Evolution0 citations Open access
Semantic Scholar
Comparative single-cell transcriptomic analysis reveals key 1 differentiation drivers and the potential origin of the vertebrate 2 retina
Xin Zeng, Fuki Gyoja, Yang Cui, Martin Loza +2 more
0 citations
Semantic Scholar

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