J. Tate

Most-cited papers

The Pfam protein families database
M. Punta, P. Coggill, R. Eberhardt, J. Mistry +12 more
2011Nucleic Acids Res.6,805 citations Open access
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The Pfam protein families database: towards a more sustainable future
R. Finn, P. Coggill, R. Eberhardt, S. Eddy +9 more
2015Nucleic Acids Res.5,299 citations Open access
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COSMIC: the Catalogue Of Somatic Mutations In Cancer
J. Tate, S. Bamford, Harry C. Jubb, Zbyslaw Sondka +22 more
2018Nucleic Acids Res.1,886 citations Open access
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COSMIC: somatic cancer genetics at high-resolution
S. Forbes, D. Beare, H. Boutselakis, S. Bamford +15 more
2016Nucleic Acids Res.1,855 citations Open access
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Pfam: the protein families database
R. Finn, A. Bateman, J. Clements, P. Coggill +9 more
2013Nucleic Acids Res.1,419 citations Open access
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Ensembl 2021
Kevin Howe, P. Achuthan, James E. Allen, Jamie Allen +75 more
2020Nucleic Acids Res.1,340 citations Open access
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InterPro in 2011: new developments in the family and domain prediction database
S. Hunter, Philip Jones, A. Mitchell, R. Apweiler +46 more
2011Nucleic Acids Research1,145 citations Open access
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Rfam 12.0: updates to the RNA families database
Eric P. Nawrocki, Sarah W. Burge, A. Bateman, J. Daub +7 more
2014Nucleic Acids Res.1,051 citations Open access
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Rfam: updates to the RNA families database
P. Gardner, J. Daub, J. Tate, Eric P. Nawrocki +7 more
2008Nucleic Acids Res.942 citations Open access
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Ensembl 2023
Fergal J. Martin, M. Amode, A. Aneja, Olanrewaju Austine-Orimoloye +92 more
2022Nucleic Acids Res.822 citations Open access
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Rfam 11.0: 10 years of RNA families
Sarah W. Burge, J. Daub, R. Eberhardt, J. Tate +5 more
2012Nucleic Acids Res.808 citations Open access
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Ensembl 2022
F. Cunningham, James E. Allen, Jamie Allen, Jorge Alvarez-Jarreta +91 more
2021Nucleic Acids Res.486 citations Open access
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Rfam: Wikipedia, clans and the “decimal” release
P. Gardner, J. Daub, J. Tate, B. Moore +7 more
2010Nucleic Acids Res.409 citations Open access
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Potassium channels: structures, models, simulations.
M. Sansom, I. Shrivastava, J. Bright, J. Tate +2 more
2002Biochimica et Biophysica Acta158 citations Open access
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Ensembl Genomes 2022: an expanding genome resource for non-vertebrates
Andrew D. Yates, James E. Allen, R. Amode, A. Azov +61 more
2021Nucleic Acids Res.153 citations Open access
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COSMIC: High‐Resolution Cancer Genetics Using the Catalogue of Somatic Mutations in Cancer
S. Forbes, D. Beare, N. Bindal, S. Bamford +15 more
2016Current Protocols in Human Genetics152 citations
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The COMBREX Project: Design, Methodology, and Initial Results
B. Anton, Yi-Chien Chang, P. Brown, Han-Pil Choi +70 more
2013PLoS Biology140 citations Open access
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The RNA WikiProject: community annotation of RNA families.
J. Daub, P. Gardner, J. Tate, D. Ramsköld +5 more
2008RNA: A publication of the RNA Society74 citations Open access
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SOAP-based services provided by the European Bioinformatics Institute
Sharmila Pillai, Ville Silventoinen, Kimmo Kallio, M. Senger +8 more
2005Nucleic Acids Res.73 citations Open access
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Introduction to Storage Area Networks
J. Tate, A. Bernasconi, P. Mescher, F. Scholten
200355 citations
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Rfam: annotating families of non-coding RNA sequences.
J. Daub, R. Eberhardt, J. Tate, Sarah W. Burge
2015Methods in molecular biology37 citations
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E-MSD: improving data deposition and structure quality
Mohammed Tagari, J. Tate, G. Swaminathan, R. Newman +7 more
2005Nucleic Acids Res.35 citations Open access
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InterPro in 2011: new developments in the family and domain prediction database
S. Hunter, P. Jones, A. Mitchell, R. Apweiler +51 more
2012Nucleic Acids Res.21 citations Open access
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The Ensembl COVID-19 resource: ongoing integration of public SARS-CoV-2 data
Nishadi H. De Silva, Jyothish Bhai, Marc Chakiachvili, B. Contreras-Moreira +23 more
2020bioRxiv9 citations Open access
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CKAAPs DB: a Conserved Key Amino Acid Positions DataBase
Wilfred W. Li, B. V. B. Reddy, J. Tate, I. Shindyalov +1 more
2002Nucleic Acids Res.8 citations Open access
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CKAAPs DB: a conserved key amino acid positions database
Wilfred W. Li, B. V. B. Reddy, J. Tate, I. Shindyalov +1 more
2001Nucleic Acids Res.7 citations Open access
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MSG (Molecular Scene Generator): a Web-based application for the visualization of macromolecular structures
J. Tate, J. Moreland, P. Bourne
19992 citations
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Abstract 3284: COSMIC: Integrating and interpreting the world's knowledge of somatic mutations in cancer
Zbyslaw Sondka, S. Bamford, C. Cole, E. Dawson +17 more
2018Bioinformatics and Systems Biology1 citations
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Abstract 2599: COSMIC Cancer Gene Census: expert descriptions across genes in oncogenesis
Zbyslaw Sondka, S. Bamford, C. Cole, E. Dawson +6 more
20171 citations
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Abstract 906: COSMIC: Describing the world’s knowledge of somatic mutations in cancer
S. Forbes, D. Beare, charalampos boutselakis, S. Bamford +20 more
2019Bioinformatics, Convergence Science, and Systems Biology0 citations
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Triaging PubMed literature to discover novel mutations for the Catalogue of Somatic Mutations in Cancer (COSMIC) with PubTator
S. Ward, Chih-Hsuan Wei, L. Ponting, S. Bamford +16 more
20190 citations Open access
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Peer Review #2 of "Proteomics and bioinformatics analysis reveal potential roles of cadmium-binding proteins in cadmium tolerance and accumulation of Enterobacter cloacae (v0.1)"
Kitipong Chuanboon, Piyada Na Nakorn, S. Pannengpetch, Vishuda Laengsri +300 more
20190 citations Open access
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Controlling Switches Between Attractors in a Time-Delayed Dynamical System
J. Tate
20190 citations
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COSMIC: expanding curation to highlight drug-resistant mutations in cancer
L. Ponting, S. Bamford, C. Cole, S. Ward +16 more
20170 citations Open access
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Broadening Pfam Protein Sequence Annotations
J. Mistry, Penny Cogghill, S. Eddy, R. Finn +2 more
20090 citations Open access
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mmCIF and dictionary driven software with the MSD database production pipeline
K. Henrick, S. Valenkar, H. Boutselakis, A. Hussain +8 more
20050 citations Open access
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Issues in the Annotation of Protein Structures
G. Swaminathan, J. Tate, R. Newman, A. Hussain +3 more
20050 citations
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The EBI macromolecular structure database (E-MSD) and structural genomics
K. Henrick, H. Boutselakis, D. Dimitropoulos, A. Golovin +10 more
20020 citations Open access
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