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J. Deakin · SciRah

Researcher profile · Semantic Scholar

J. Deakin

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J. Deakin — researcher profile on SciRah

h-index: 39
Works: 125
Citations: 6,772

Most-cited papers

Tumour invasion and metastasis initiated by microRNA-10b in breast cancer
W. Warren, L. Hillier, J. Marshall Graves, E. Birney +100 more
2008Nature1,079 citations Open access
Semantic Scholar
Genome analysis of the platypus reveals unique signatures of evolution
W. Warren, L. Hillier, J. Marshall Graves, E. Birney +100 more
2008Nature763 citations Open access
Semantic Scholar
Bird-like sex chromosomes of platypus imply recent origin of mammal sex chromosomes.
F. Veyrunes, P. Waters, Pat Miethke, W. Rens +11 more
2008Genome Research321 citations Open access
Semantic Scholar
Adaptation and conservation insights from the koala genome
Rebecca N. Johnson, D. O'Meally, Zhiliang Chen, G. Etherington +50 more
2018Nature Genetics211 citations Open access
Semantic Scholar
Defensins and the convergent evolution of platypus and reptile venom genes.
C. Whittington, A. Papenfuss, P. Bansal, A. Torres +11 more
2008Genome Research138 citations Open access
Semantic Scholar
Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development
M. Renfree, A. Papenfuss, J. Deakin, James Lindsay +99 more
2011Genome Biology132 citations Open access
Semantic Scholar
Chromosomal Speciation in the Genomics Era: Disentangling Phylogenetic Evolution of Rock-wallabies
S. Potter, J. Bragg, M. Blom, J. Deakin +3 more
2017Frontiers in Genetics131 citations Open access
Semantic Scholar
The Evolution of Epigenetic Regulators CTCF and BORIS/CTCFL in Amniotes
T. Hore, J. Deakin, J. Marshall Graves
2008PLoS Genetics105 citations Open access
Semantic Scholar
High-coverage sequencing and annotated assembly of the genome of the Australian dragon lizard Pogona vitticeps
A. Georges, Qi-Ye Li, Jinmin Lian, D. O'Meally +13 more
2015GigaScience101 citations Open access
Semantic Scholar
Chromosomics: Bridging the Gap between Genomes and Chromosomes
J. Deakin, S. Potter, R. O'Neill, A. Ruiz-Herrera +12 more
2019Genes100 citations Open access
Semantic Scholar
Genome sequence of an Australian kangaroo, Macropus eugenii, provides insight into the evolution of mammalian reproduction and development
M. Renfree, A. Papenfuss, J. Deakin, James Lindsay +100 more
2011Genome Biology100 citations Open access
Semantic Scholar
Genomic Restructuring in the Tasmanian Devil Facial Tumour: Chromosome Painting and Gene Mapping Provide Clues to Evolution of a Transmissible Tumour
J. Deakin, H. Bender, A. Pearse, W. Rens +11 more
2012PLoS Genetics97 citations Open access
Semantic Scholar
Exceptionally high conservation of the MHC class I-related gene, MR1, among mammals
Kentaro Tsukamoto, J. Deakin, J. Marshall Graves, K. Hashimoto
2012Immunogenetics96 citations
Semantic Scholar
The Status of Dosage Compensation in the Multiple X Chromosomes of the Platypus
J. Deakin, T. Hore, E. Koina, J. Marshall Graves
2008PLoS Genetics94 citations Open access
Semantic Scholar
Smchd1 regulates a subset of autosomal genes subject to monoallelic expression in addition to being critical for X inactivation
A. Mould, Zhenyi Pang, M. Pakusch, I. Tonks +10 more
2013Epigenetics & Chromatin92 citations Open access
Semantic Scholar
Physical map of two tammar wallaby chromosomes: A strategy for mapping in non-model mammals
J. Deakin, E. Koina, P. Waters, Ruth J Doherty +14 more
2008Chromosome Research75 citations
Semantic Scholar
Understanding the Evolution of Reptile Chromosomes through Applications of Combined Cytogenetics and Genomics Approaches
J. Deakin, T. Ezaz
2019Cytogenetic and Genome Research70 citations
Semantic Scholar
Unravelling the evolutionary origins of X chromosome inactivation in mammals: insights from marsupials and monotremes
J. Deakin, Julie Chaumeil, T. Hore, J. Marshall Graves
2009Chromosome Research65 citations Open access
Semantic Scholar
Antigen-presenting genes and genomic copy number variations in the Tasmanian devil MHC
Yuanyuan Cheng, Andrew B. Stuart, K. Morris, Robyn L. Taylor +5 more
2012BMC Genomics62 citations Open access
Semantic Scholar
Anchoring genome sequence to chromosomes of the central bearded dragon (Pogona vitticeps) enables reconstruction of ancestral squamate macrochromosomes and identifies sequence content of the Z chromosome
J. Deakin, Melanie J. Edwards, H. Patel, D. O'Meally +8 more
2016BMC Genomics55 citations Open access
Semantic Scholar
Platypus globin genes and flanking loci suggest a new insertional model for beta-globin evolution in birds and mammals
V. Patel, S. Cooper, J. Deakin, B. Fulton +4 more
200851 citations
Semantic Scholar
Activity map of the tammar X chromosome shows that marsupial X inactivation is incomplete and escape is stochastic
Shafagh Al Nadaf, P. Waters, E. Koina, J. Deakin +2 more
2010Genome Biology50 citations Open access
Semantic Scholar
Evolution and comparative analysis of the bat MHC-I region
J. Ng, M. Tachedjian, J. Deakin, J. W. Wynne +7 more
2016Scientific Reports48 citations Open access
Semantic Scholar
Repetitive Sequence and Sex Chromosome Evolution in Vertebrates
T. Ezaz, J. Deakin
201448 citations Open access
Semantic Scholar
Extreme Telomere Length Dimorphism in the Tasmanian Devil and Related Marsupials Suggests Parental Control of Telomere Length
H. Bender, E. Murchison, H. Pickett, J. Deakin +8 more
2012PLoS ONE48 citations Open access
Semantic Scholar
Sequence and gene content of a large fragment of a lizard sex chromosome and evaluation of candidate sex differentiating gene R-spondin 1
T. Ezaz, Bhumika Azad, D. O'Meally, Matthew J. Young +9 more
2013BMC Genomics45 citations Open access
Semantic Scholar
Comparative Genome Analyses Reveal Distinct Structure in the Saltwater Crocodile MHC
Weerachai Jaratlerdsiri, J. Deakin, Ricardo Godinez, Xueyan Shan +11 more
2014PLoS ONE43 citations Open access
Semantic Scholar
The Evolution of Marsupial and Monotreme Chromosomes
J. Deakin, J. Marshall Graves, W. Rens
2012Cytogenetic and Genome Research43 citations Open access
Semantic Scholar
A review of complementary mechanisms which protect the developing marsupial pouch young.
Melanie J. Edwards, Lyn A. Hinds, E. Deane, J. Deakin
2012Developmental and Comparative Immunology43 citations
Semantic Scholar
In Vivo Function and Evolution of the Eutherian-Specific Pluripotency Marker UTF1
Masazumi Nishimoto, Miyuki Katano, T. Yamagishi, Tomoaki Hishida +16 more
2013PLoS ONE40 citations Open access
Semantic Scholar
Tracing the evolution of amniote chromosomes
J. Deakin, T. Ezaz
2014Chromosoma38 citations Open access
Semantic Scholar
The tammar wallaby major histocompatibility complex shows evidence of past genomic instability
H. Siddle, J. Deakin, P. Coggill, Laurens G Whilming +4 more
2011BMC Genomics37 citations Open access
Semantic Scholar
Principles of 3D chromosome folding and evolutionary genome reshuffling in mammals.
L. Álvarez-González, Cristina Arias-Sardá, Laia Montes-Espuña, Laia Marín-Gual +11 more
2022Cell Reports34 citations Open access
Semantic Scholar
Global DNA Methylation patterns on marsupial and devil facial tumour chromosomes
Emory D. Ingles, J. Deakin
2015Molecular Cytogenetics32 citations Open access
Semantic Scholar
Independent Evolution of Transcriptional Inactivation on Sex Chromosomes in Birds and Mammals
Alexandra M. Livernois, Shafagh A. Waters, J. Deakin, J. Marshall Graves +1 more
2013PLoS Genetics31 citations Open access
Semantic Scholar
A cross-species comparison of escape from X inactivation in Eutheria: implications for evolution of X chromosome inactivation
Shafagh Al Nadaf, J. Deakin, C. Gilbert, T. J. Robinson +2 more
2011Chromosoma30 citations Open access
Semantic Scholar
Chromosome Evolution in Marsupials
J. Deakin
2018Genes29 citations Open access
Semantic Scholar
Reconstruction of the ancestral marsupial karyotype from comparative gene maps
J. Deakin, M. Delbridge, E. Koina, Nerida Harley +4 more
2013BMC Evolutionary Biology29 citations Open access
Semantic Scholar
Identification of Y chromosome markers in the eastern three-lined skink (Bassiana duperreyi) using in silico whole genome subtraction
D. Dissanayake, C. Holleley, L. Hill, D. O'Meally +2 more
2020BMC Genomics28 citations Open access
Semantic Scholar
A first-generation integrated tammar wallaby map and its use in creating a tammar wallaby first-generation virtual genome map
Chenwei Wang, J. Deakin, W. Rens, K. Zenger +3 more
2011BMC Genomics28 citations Open access
Semantic Scholar
High elevation increases the risk of Y chromosome loss in Alpine skink populations with sex reversal
D. Dissanayake, C. Holleley, J. Deakin, A. Georges
2021Heredity25 citations Open access
Semantic Scholar
Telomeres, species differences, and unusual telomeres in vertebrates: presenting challenges and opportunities to understanding telomere dynamics
Emory D. Ingles, J. Deakin
2016AIMS Genetics24 citations Open access
Semantic Scholar
Identification of natural killer cell receptor clusters in the platypus genome reveals an expansion of C-type lectin genes
Emily S. Wong, Claire E. Sanderson, J. Deakin, C. Whittington +2 more
2009Immunogenetics23 citations
Semantic Scholar
A comparative genomics approach to understanding transmissible cancer in Tasmanian devils.
J. Deakin, K. Belov
2012Annual review of genomics and human genetics (Print)21 citations
Semantic Scholar
Origin and evolution of candidate mental retardation genes on the human X chromosome (MRX)
M. Delbridge, Daniel A. McMillan, Ruth J Doherty, J. Deakin +1 more
2008BMC Genomics21 citations Open access
Semantic Scholar
Sex-specific splicing of Z- and W-borne nr5a1 alleles suggests sex determination is controlled by chromosome conformation
Xiu-Wen Zhang, S. Wagner, C. Holleley, J. Deakin +10 more
2022Proceedings of the National Academy of Sciences of the United States of America20 citations Open access
Semantic Scholar
Identification of candidate genes for devil facial tumour disease tumourigenesis
Robyn L. Taylor, Yiru Zhang, Jennifer Schöning, J. Deakin
2017Scientific Reports20 citations Open access
Semantic Scholar
Marsupials and monotremes possess a novel family of MHC class I genes that is lost from the eutherian lineage
A. Papenfuss, Zhi-Ping Feng, K. Krasnec, J. Deakin +2 more
2015BMC Genomics20 citations Open access
Semantic Scholar
Pathogenesis and molecular biology of a transmissible tumor in the Tasmanian devil.
H. Bender, J. Marshall Graves, J. Deakin
2014Annual Review of Animal Biosciences20 citations Open access
Semantic Scholar
Marsupial Genome Sequences: Providing Insight into Evolution and Disease
J. Deakin
2012Scientifica20 citations Open access
Semantic Scholar

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