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L. Cardle · SciRah

Researcher profile · Semantic Scholar

L. Cardle

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L. Cardle — researcher profile on SciRah

h-index: 28
Works: 47
Citations: 5,285

Most-cited papers

Using Tablet for visual exploration of second-generation sequencing data
I. Milne, G. Stephen, M. Bayer, P. Cock +4 more
2013Briefings Bioinform.956 citations Open access
Semantic Scholar
A simple sequence repeat-based linkage map of barley.
L. Ramsay, M. Macaulay, S. Ivanissevich, K. MacLean +12 more
2000Genetics688 citations
Semantic Scholar
Alternative splicing and nonsense-mediated decay modulate expression of important regulatory genes in Arabidopsis
M. Kalyna, C. Simpson, N. Syed, Dominika Lewandowska +9 more
2011Nucleic Acids Research463 citations Open access
Semantic Scholar
Computational and experimental characterization of physically clustered simple sequence repeats in plants.
L. Cardle, L. Ramsay, D. Milbourne, M. Macaulay +2 more
2000Genetics428 citations
Semantic Scholar
Resistance gene enrichment sequencing (RenSeq) enables reannotation of the NB-LRR gene family from sequenced plant genomes and rapid mapping of resistance loci in segregating populations
Florian Jupe, K. Witek, Walter Verweij, J. Śliwka +9 more
2013The Plant Journal376 citations Open access
Semantic Scholar
Recent history of artificial outcrossing facilitates whole-genome association mapping in elite inbred crop varieties
N. Rostoks, L. Ramsay, K. MacKenzie, L. Cardle +9 more
2006Proceedings of the National Academy of Sciences of the United States of America338 citations Open access
Semantic Scholar
Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress
N. Rostoks, Sharon Mudie, L. Cardle, J. Russell +12 more
2005Zeitschrift für Induktive Abstammungs- und Vererbungslehre295 citations
Semantic Scholar
Co-ordinated gene expression during phases of dormancy release in raspberry (Rubus idaeus L.) buds.
L. Mazzitelli, R. D. Hancock, S. Haupt, P. G. Walker +8 more
2007Journal of Experimental Botany209 citations Open access
Semantic Scholar
Intimate association of microsatellite repeats with retrotransposons and other dispersed repetitive elements in barley.
Luke Ramsay, Malcolm Macaulay, L. Cardle, M. Morgante +4 more
1999The Plant Journal185 citations Open access
Semantic Scholar
Single-feature polymorphism discovery in the barley transcriptome
N. Rostoks, J. Borevitz, P. Hedley, J. Russell +5 more
2005Genome Biology156 citations Open access
Semantic Scholar
Flapjack—graphical genotype visualization
I. Milne, Paul D. Shaw, G. Stephen, M. Bayer +4 more
2010Bioinform.138 citations Open access
Semantic Scholar
Solution conformational analysis of the alpha-zein proteins of maize.
A. Tatham, J. Field, V. Morris, K. I'Anson +3 more
1993Journal of Biological Chemistry95 citations Open access
Semantic Scholar
An eQTL Analysis of Partial Resistance to Puccinia hordei in Barley
Xinwei Chen, C. Hackett, R. Niks, P. Hedley +11 more
2010PLoS ONE89 citations Open access
Semantic Scholar
Changes in gene expression during meristem activation processes in Solanum tuberosum with a focus on the regulation of an auxin response factor gene.
O. Faivre-Rampant, L. Cardle, D. Marshall, R. Viola +1 more
2004Journal of Experimental Botany87 citations Open access
Semantic Scholar
Analysis of genes expressed in second stage juveniles of the potato cyst nematodes Globodera rostochiensis and G. pallida using the expressed sequence tag approach
H. Popeijus, V. Blok, L. Cardle, E. Bakker +4 more
200074 citations Open access
Semantic Scholar
Candidate genes associated with bud dormancy release in blackcurrant (Ribes nigrum L.)
P. Hedley, J. Russell, L. Jorgensen, S. Gordon +4 more
2010BMC Plant Biology67 citations Open access
Semantic Scholar
Potato oxysterol binding protein and cathepsin B are rapidly up-regulated in independent defence pathways that distinguish R gene-mediated and field resistances to Phytophthora infestans.
A. Avrova, N. Taleb, V. Rokka, J. Heilbronn +9 more
2004Molecular plant pathology67 citations Open access
Semantic Scholar
Identification, characterisation and mapping of simple sequence repeat (SSR) markers from raspberry root and bud ESTs
M. Woodhead, S. McCallum, K. Smith, L. Cardle +2 more
2008Molecular breeding61 citations
Semantic Scholar
Tablet: Visualizing Next-Generation Sequence Assemblies and Mappings.
I. Milne, M. Bayer, G. Stephen, L. Cardle +1 more
2016Methods in molecular biology55 citations
Semantic Scholar
Development of pepper SSR markers from sequence databases
H. Sanwen, Bao-Xi Zhang, D. Milbourne, L. Cardle +2 more
2001Euphytica54 citations
Semantic Scholar
Comparative visualization of genetic and physical maps with Strudel
M. Bayer, I. Milne, G. Stephen, P. Shaw +3 more
2011Bioinform.42 citations Open access
Semantic Scholar
A comparative analysis of transcript abundance using SAGE and Affymetrix arrays
Adel F. M. Ibrahim, P. Hedley, L. Cardle, W. Kruger +3 more
2005Functional & Integrative Genomics39 citations
Semantic Scholar
Development of EST‐SSRs from the Alpine Lady‐fern, Athyrium distentifolium
M. Woodhead, J. Russell, J. Squirrell, P. Hollingsworth +4 more
200338 citations
Semantic Scholar
Use of genome sequence data in the design and testing of SSR markers for Phytophthora species
L. Schena, L. Cardle, David El Cooke
2008BMC Genomics31 citations Open access
Semantic Scholar
Sample sequencing of a selected region of the genome of Erwinia carotovora subsp. atroseptica reveals candidate phytopathogenicity genes and allows comparison with Escherichia coli.
K. Bell, A. Avrova, M. Holeva, L. Cardle +6 more
2002Microbiology31 citations Open access
Semantic Scholar
Identification, utilisation and mapping of novel transcriptome-based markers from blackcurrant (Ribes nigrum)
J. Russell, M. Bayer, Clare Booth, L. Cardle +5 more
2011BMC Plant Biology30 citations Open access
Semantic Scholar
Isolation, analysis and marker utility of novel miniature inverted repeat transposable elements from the barley genome
M. Lyons, L. Cardle, N. Rostoks, R. Waugh +1 more
2008Zeitschrift für Induktive Abstammungs- und Vererbungslehre29 citations
Semantic Scholar
Characterisation and functional analysis of two barley caleosins expressed during barley caryopsis development
Hui Liu, P. Hedley, L. Cardle, K. Wright +3 more
2005Planta29 citations
Semantic Scholar
Analysis of expressed sequence tags from the ectoparasitic nematode Xiphinema index
C. Furlanetto, L. Cardle, Derek J. F. Brown, John T. Jones
200527 citations
Semantic Scholar
Foci of amino acid residue conservation in the 3D structures of the Kunitz BPTI proteinase inhibitors: how do variants from snake venom differ?
L. Cardle, M. Dufton
1997Protein Engineering26 citations
Semantic Scholar
UK CropNet: a collection of databases and bioinformatics resources for crop plant genomics
J. Dicks, Mary Anderson, L. Cardle, S. Cartinhour +12 more
2000Nucleic Acids Res.20 citations Open access
Semantic Scholar
tropiTree: An NGS-Based EST-SSR Resource for 24 Tropical Tree Species
J. Russell, P. Hedley, L. Cardle, S. Dancey +12 more
2014PLoS ONE17 citations Open access
Semantic Scholar
Exploiting induced variation to dissect quantitative traits in barley.
A. Druka, J. Franckowiak, U. Lundqvist, Nicola Bonar +16 more
2010Biochemical Society Transactions12 citations
Semantic Scholar
Highly parallel gene-to-BAC addressing using microarrays.
Hui Liu, Jim McNicol, M. Bayer, J. Morris +8 more
2011BioTechniques9 citations Open access
Semantic Scholar
Genome-Tagged Amplification (GTA): a PCR-based method to prepare sample-tagged amplicons from hundreds of individuals for next generation sequencing
Thiện Hồ, L. Cardle, Xin Xu, M. Bayer +4 more
2014Molecular breeding7 citations
Semantic Scholar
Identification of important functional environs in protein tertiary structures from the analysis of residue variation in 3-D: application to cytochromes c and carboxypeptidases A and B.
L. Cardle, M. Dufton
1994Protein Engineering7 citations
Semantic Scholar
Development of EST‐derived microsatellite markers for Arabidopsis lyrata subspecies petraea (L.)
M. Woodhead, J. Russell, J. Squirrell, P. Hollingsworth +3 more
20075 citations
Semantic Scholar
Simple intrasequence difference (SID) analysis: an original method to highlight and rank sub-structural interfaces in protein folds. Application to the folds of bovine pancreatic trypsin inhibitor, phospholipase A2, chymotrypsin and carboxypeptidase A.
L. Pritchard, L. Cardle, S. Quinn, M. Dufton
2003Protein Engineering5 citations
Semantic Scholar
SSR frequency and occurrence in plant genomes.
L. Cardle, M. Macaulay, D. Marshall, D. Milbourne +2 more
20003 citations
Semantic Scholar
UsingTablet for visual exploration of second-generation sequencing data
I. Milne, G. Stephen, M. Bayer, P. Cock +4 more
20131 citations
Semantic Scholar
Peer Review #1 of "Plastid genomics of Nicotiana (Solanaceae): insights into molecular evolution, positive selection and the origin of the maternal genome of Aztec tobacco (Nicotiana rustica) (v0.1)"
F. Mehmood, Abdullah Abdullah, Zartasha Ubaid, I. Shahzadi +496 more
20200 citations Open access
Semantic Scholar
Scotland ' s Rural College TropiTree : An NGS-based EST-SSR resource for 24 tropical tree species
J. Russell, P. Hedley, L. Cardle, S. Dancey +12 more
20190 citations
Semantic Scholar
Genome-Tagged Amplification (GTA): a PCR-based method to prepare sample-tagged amplicons from hundreds of individuals for next generation sequencing
Thiện Hồ, L. Cardle, Xin Xu, M. Bayer +4 more
2014Molecular breeding0 citations
Semantic Scholar
Unravelling Signalling Processes in the Potato R Gene Resistance Response to Phytophthora infestans
V. Rokka, A. Avrova, I. Hein, E. Gilroy +2 more
20020 citations
Semantic Scholar
Abstract British Venom Group: Second Summer Meeting Blaenwaum Farm, Dyfed, U.K. 26 August 1994Bioinformatic approaches to toxin structure-activity
M. Nyegaard, L. Cardle, M. Dufton
19950 citations
Semantic Scholar

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