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I. Erill · SciRah

Researcher profile · Semantic Scholar

I. Erill

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I. Erill — researcher profile on SciRah

h-index: 26
Works: 113
Citations: 2,761

Most-cited papers

The SOS Response Controls Integron Recombination
E. Guérin, G. Cambray, Neus Sanchez-Alberola, S. Campoy +6 more
2009Science432 citations Open access
Semantic Scholar
Aeons of distress: an evolutionary perspective on the bacterial SOS response.
I. Erill, S. Campoy, J. Barbé
2007FEMS Microbiology Reviews365 citations Open access
Semantic Scholar
Prevalence of SOS-mediated control of integron integrase expression as an adaptive trait of chromosomal and mobile integrons
G. Cambray, Neus Sanchez-Alberola, S. Campoy, E. Guérin +6 more
2011Mobile DNA122 citations Open access
Semantic Scholar
CollecTF: a database of experimentally validated transcription factor-binding sites in Bacteria
Sefa Kılıç, Elliot R. White, Dinara M. Sagitova, Joseph P. Cornish +1 more
2013Nucleic Acids Res.104 citations Open access
Semantic Scholar
Dispersal and regulation of an adaptive mutagenesis cassette in the bacteria domain
I. Erill, S. Campoy, G. Mazón, J. Barbé
2006Nucleic Acids Research93 citations Open access
Semantic Scholar
Relative Codon Adaptation: A Generic Codon Bias Index for Prediction of Gene Expression
J. M. Fox, I. Erill
2010DNA Research92 citations Open access
Semantic Scholar
ECO, the Evidence & Conclusion Ontology: community standard for evidence information
M. Giglio, Rebecca Tauber, S. Nadendla, James B. Munro +11 more
2018Nucleic Acids Res.71 citations Open access
Semantic Scholar
Genome-Scale Analyses of Escherichia coli and Salmonella enterica AraC Reveal Noncanonical Targets and an Expanded Core Regulon
A. Stringer, S. Currenti, R. Bonocora, C. Baranowski +6 more
2013Journal of Bacteriology68 citations Open access
Semantic Scholar
Manufacturing and full characterization of silicon carbide-based multi-sensor micro-probes for biomedical applications
G. Gabriel, I. Erill, J. Caro, Rodrigo Gómez +3 more
2007Microelectronics Journal58 citations Open access
Semantic Scholar
Origin of the Mobile Di-Hydro-Pteroate Synthase Gene Determining Sulfonamide Resistance in Clinical Isolates
Miquel Sánchez-Osuna, P. Cortés, J. Barbé, I. Erill
2018bioRxiv57 citations Open access
Semantic Scholar
Induction of the SOS response by bacteriophage lytic development in Salmonella enterica.
S. Campoy, A. Hervàs, N. Busquets, I. Erill +2 more
2006Virology50 citations Open access
Semantic Scholar
Exploration into the origins and mobilization of di-hydrofolate reductase genes and the emergence of clinical resistance to trimethoprim
Miquel Sánchez-Osuna, P. Cortés, M. Llagostera, J. Barbé +1 more
2020Microbial Genomics47 citations Open access
Semantic Scholar
A reexamination of information theory-based methods for DNA-binding site identification
I. Erill, M. C. O'Neill
2009BMC Bioinformatics47 citations Open access
Semantic Scholar
Comparative genomics of the DNA damage‐inducible network in the Patescibacteria
Miquel Sánchez-Osuna, J. Barbé, I. Erill
2017Environmental Microbiology44 citations Open access
Semantic Scholar
Expression of Canonical SOS Genes Is Not under LexA Repression in Bdellovibrio bacteriovorus
S. Campoy, Noelia Salvador, P. Cortés, I. Erill +1 more
2005Journal of Bacteriology41 citations Open access
Semantic Scholar
Cohabitation of Two Different lexA Regulons in Pseudomonas putida
Marc Abella, S. Campoy, I. Erill, F. Rojo +1 more
2007Journal of Bacteriology40 citations Open access
Semantic Scholar
Analysis of the SOS response of Vibrio and other bacteria with multiple chromosomes
Neus Sanchez-Alberola, S. Campoy, J. Barbé, I. Erill
2012BMC Genomics39 citations Open access
Semantic Scholar
Conceptualization of the Holobiont Paradigm as It Pertains to Corals
T. L. Goulet, I. Erill, M. Ascunce, Sheree J. Finley +1 more
2020Frontiers in Physiology36 citations Open access
Semantic Scholar
Genomic characterization and comparison of seven Myoviridae bacteriophage infecting Bacillus thuringiensis.
A. Sauder, M. Quinn, Alexis Brouillette, Steven M. Caruso +8 more
2016Virology34 citations Open access
Semantic Scholar
ECO: the Evidence and Conclusion Ontology, an update for 2022
S. Nadendla, Rebecca C. Jackson, James Munro, F. Quaglia +9 more
2021Nucleic Acids Res.28 citations Open access
Semantic Scholar
A SiC microdevice for the minimally invasive monitoring of ischemia in living tissues
Rodrigo Gómez, A. Ivorra, R. Villa, P. Godignon +5 more
2006Biomedical microdevices27 citations
Semantic Scholar
Real-time direct measurement of human liver allograft temperature from recovery to transplantation.
R. Villa, C. Fondevila, I. Erill, A. Guimerà +4 more
2006Transplantation26 citations Open access
Semantic Scholar
From data repositories to submission portals: rethinking the role of domain-specific databases in CollecTF
Sefa Kılıç, Dinara M. Sagitova, S. Wolfish, B. Bely +7 more
2016Database J. Biol. Databases Curation23 citations Open access
Semantic Scholar
Quality Matters: Biocuration Experts on the Impact of Duplication and Other Data Quality Issues in Biological Databases
Qingyu Chen, Ramona Britto, I. Erill, C. Jeffery +7 more
2019bioRxiv22 citations Open access
Semantic Scholar
Non-canonical LexA proteins regulate the SOS response in the Bacteroidetes
Miquel Sánchez-Osuna, P. Cortés, Mark Lee, Aaron T. Smith +2 more
2021Nucleic Acids Research21 citations Open access
Semantic Scholar
A Novel Genus of Actinobacterial Tectiviridae
Steven M. Caruso, Tagide N. deCarvalho, A. Huynh, G. Morcos +3 more
2019Viruses21 citations Open access
Semantic Scholar
In vivo detection of liver steatosis in rats based on impedance spectroscopy
D. Parramón, I. Erill, A. Guimerà, A. Ivorra +5 more
2007Physiological Measurement20 citations
Semantic Scholar
Simultaneous entry as an adaptation to virulence in a novel satellite-helper system infecting Streptomyces species
Tagide N. deCarvalho, E. Mascolo, Steven M. Caruso, Júlia López-Pérez +3 more
2023The ISME Journal18 citations Open access
Semantic Scholar
Transcriptional rewiring of the GcrA/CcrM bacterial epigenetic regulatory system in closely related bacteria
Satish Adhikari, I. Erill, Patrick D. Curtis
2021PLoS Genetics18 citations Open access
Semantic Scholar
Comparative Analysis of Ralstonia solanacearum Methylomes
I. Erill, M. Puigvert, L. Legrand, Rodrigo Guarischi-Sousa +5 more
2017Frontiers in Plant Science18 citations Open access
Semantic Scholar
Identification of the Acidobacterium capsulatum LexA box reveals a lateral acquisition of the Alphaproteobacteria lexA gene.
G. Mazón, S. Campoy, I. Erill, J. Barbé
2006Microbiology17 citations Open access
Semantic Scholar
A Rapid and Reliable Means of Assessing Hepatic Steatosis In Vivo Via Electrical Bioimpedance
A. Hessheimer, D. Parramón, A. Guimerà, I. Erill +4 more
2009Transplantation15 citations Open access
Semantic Scholar
scnRCA: A Novel Method to Detect Consistent Patterns of Translational Selection in Mutationally-Biased Genomes
Patrick K. O'Neill, M. Or, I. Erill
2013PLoS ONE13 citations Open access
Semantic Scholar
Linking Copper-Associated Signal Transduction Systems with Their Environment in Marine Bacteria
Pratima Gautam, I. Erill, K. Cusick
2023Microorganisms12 citations Open access
Semantic Scholar
Crowdsourcing biocuration: The Community Assessment of Community Annotation with Ontologies (CACAO)
Jolene Ramsey, B. Mcintosh, D. Renfro, Suzanne A. Aleksander +44 more
2021bioRxiv12 citations Open access
Semantic Scholar
The Rvv two-component regulatory system regulates biofilm formation and colonization in Vibrio cholerae
Giordan Kitts, Andrew Rogers, J. Teschler, J. Park +4 more
2023PLoS Pathogens10 citations Open access
Semantic Scholar
Genomic analysis of Staphylococcus aureus isolates from bacteremia reveals genetic features associated with the COVID-19 pandemic
Miquel Sánchez-Osuna, M. Pedrosa, Paula Bierge, Inmaculada Gómez-Sánchez +5 more
2023bioRxiv10 citations Open access
Semantic Scholar
An SOS Regulon under Control of a Noncanonical LexA-Binding Motif in the Betaproteobacteria
Neus Sanchez-Alberola, S. Campoy, D. Emerson, J. Barbé +1 more
2015Journal of Bacteriology10 citations Open access
Semantic Scholar
Inference of Self-Regulated Transcriptional Networks by Comparative Genomics
Joseph P. Cornish, Fialelei Matthews, Julien Thomas, I. Erill
2012Evolutionary bioinformatics online10 citations Open access
Semantic Scholar
The Verrucomicrobia LexA-Binding Motif: Insights into the Evolutionary Dynamics of the SOS Response
I. Erill, S. Campoy, Sefa Kılıç, J. Barbé
2016Frontiers in Molecular Biosciences9 citations Open access
Semantic Scholar
A Bayesian inference method for the analysis of transcriptional regulatory networks in metagenomic data
Elizabeth T. Hobbs, Talmo D. Pereira, Patrick K. O'Neill, I. Erill
2016Algorithms for Molecular Biology9 citations Open access
Semantic Scholar
Diagnostic yield of targeted next generation sequencing in various cancer types: an information-theoretic approach.
I. Hagemann, Patrick K. O'Neill, I. Erill, J. Pfeifer
2015Cancer Genetics9 citations
Semantic Scholar
BioWord: A sequence manipulation suite for Microsoft Word
Laura J. Anzaldi, Daniel Muñoz-Fernández, I. Erill
2012BMC Bioinformatics9 citations Open access
Semantic Scholar
xFITOM: a generic GUI tool to search for transcription factor binding sites
Nidhi Bhargava, I. Erill
2010Bioinformation9 citations Open access
Semantic Scholar
Impact of mutagenesis and lateral gene transfer processes in bacterial susceptibility to phage in food biocontrol and phage therapy
Júlia López-Pérez, J. Otero, Miquel Sánchez-Osuna, I. Erill +2 more
2023Frontiers in Cellular and Infection Microbiology8 citations Open access
Semantic Scholar
The transcriptional regulator CtrA controls gene expression in Alphaproteobacteria phages: Evidence for a lytic deferment pathway
E. Mascolo, Satish Adhikari, Steven M. Caruso, Tagide N. deCarvalho +5 more
2022Frontiers in Microbiology8 citations Open access
Semantic Scholar
Systematic In Silico Assessment of Antimicrobial Resistance Dissemination across the Global Plasmidome
Miquel Sánchez-Osuna, J. Barbé, I. Erill
2023Antibiotics7 citations Open access
Semantic Scholar
Enhanced copper-resistance gene repertoire in Alteromonas macleodii strains isolated from copper-treated marine coatings
K. Cusick, Ane Iturbide, Pratima Gautam, Amelia Price +3 more
2021PLoS ONE7 citations Open access
Semantic Scholar
Assessment of transfer methods for comparative genomics of regulatory networks in bacteria
Sefa Kılıç, I. Erill
2016BMC Bioinformatics7 citations Open access
Semantic Scholar
Genome Sequence of Bacillus cereus Group Phage SalinJah
I. Erill, Steven M. Caruso
2016Genome Announcements7 citations Open access
Semantic Scholar

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J. Barbé×16
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J. Barbé — researcher profile on SciRah
S. Campoy×11
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Miquel Sánchez-Osuna×7
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Steven M. Caruso×6
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R. Villa — researcher profile on SciRah

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Neus Sanchez-Alberola×4

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Sefa Kılıç×4

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A. Guimerà — researcher profile on SciRah