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Andre R. O. Cavalcanti · SciRah

Researcher profile · Semantic Scholar

Andre R. O. Cavalcanti

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Andre R. O. Cavalcanti — researcher profile on SciRah

h-index: 17
Works: 35
Citations: 742

Most-cited papers

Computation in Living Cells: Gene Assembly in Ciliates
Andre R. O. Cavalcanti, Wei-Jen Chang
200996 citations
Semantic Scholar
Factors influencing codon usage bias in genomes
Hannah M. W. Salim, Andre R. O. Cavalcanti
200854 citations Open access
Semantic Scholar
The Pathway to Detangle a Scrambled Gene
M. Möllenbeck, Yi Zhou, Andre R. O. Cavalcanti, F. Jönsson +7 more
2008PLoS ONE47 citations Open access
Semantic Scholar
MDS_IES_DB: a database of macronuclear and micronuclear genes in spirotrichous ciliates
Andre R. O. Cavalcanti, Thomas H. Clarke, L. Landweber
2004Nucleic Acids Res.44 citations Open access
Semantic Scholar
Conservation of tandem stop codons in yeasts
Han Liang, Andre R. O. Cavalcanti, L. Landweber
2005Genome Biology43 citations Open access
Semantic Scholar
Sequencing the Oxytricha trifallax macronuclear genome: a pilot project.
T. Doak, Andre R. O. Cavalcanti, N. Stover, D. Dunn +3 more
2003Trends in Genetics42 citations Open access
Semantic Scholar
Inter-Colony Comparison of Diving Behavior of an Arctic Top Predator: Implications for Warming in the Greenland Sea
N. Karnovsky, Z. Brown, J. Welcker, A. Harding +6 more
201139 citations Open access
Semantic Scholar
Patterns of codon usage in two ciliates that reassign the genetic code: Tetrahymena thermophila and Paramecium tetraurelia.
Hannah M. W. Salim, K. Ring, Andre R. O. Cavalcanti
2008Protist39 citations
Semantic Scholar
Decoding the Decoding Region: Analysis of Eukaryotic Release Factor (eRF1) Stop Codon-Binding Residues
Han Liang, J. Wong, Q. Bao, Andre R. O. Cavalcanti +1 more
2005Journal of Molecular Evolution32 citations
Semantic Scholar
Coding properties of Oxytricha trifallax (Sterkiella histriomuscorum) macronuclear chromosomes: analysis of a pilot genome project
Andre R. O. Cavalcanti, N. Stover, L. Orecchia, T. Doak +1 more
2004Chromosoma31 citations
Semantic Scholar
Tandem Stop Codons in Ciliates That Reassign Stop Codons
Marie Adachi, Andre R. O. Cavalcanti
2009Journal of Molecular Evolution29 citations
Semantic Scholar
Sequence features of Oxytricha trifallax (class Spirotrichea) macronuclear telomeric and subtelomeric sequences.
Andre R. O. Cavalcanti, D. Dunn, R. Weiss, Glenn Herrick +2 more
2004Protist29 citations
Semantic Scholar
Multiple Independent Fusions of Glucose-6-Phosphate Dehydrogenase with Enzymes in the Pentose Phosphate Pathway
N. Stover, T. A. Dixon, Andre R. O. Cavalcanti
2011PLoS ONE28 citations Open access
Semantic Scholar
Spliced leader trans-splicing.
N. Stover, Michelle S. Kaye, Andre R. O. Cavalcanti
2006Current Biology21 citations Open access
Semantic Scholar
Interconversion of Germline-Limited and Somatic DNA in a Scrambled Gene
M. Möllenbeck, Andre R. O. Cavalcanti, F. Jönsson, H. Lipps +1 more
2006Journal of Molecular Evolution18 citations
Semantic Scholar
Reciprocal fusions of two genes in the formaldehyde detoxification pathway in ciliates and diatoms.
N. Stover, Andre R. O. Cavalcanti, Anya J Li, B. Richardson +1 more
2005Molecular biology and evolution18 citations
Semantic Scholar
An Alternative Look at Code Evolution: Using Non-canonical Codes to Evaluate Adaptive and Historic Models for the Origin of the Genetic Code
D. Morgens, Andre R. O. Cavalcanti
2013Journal of Molecular Evolution17 citations
Semantic Scholar
Gene Unscrambler for detangling scrambled genes in ciliates
Andre R. O. Cavalcanti, L. Landweber
2004Bioinform.13 citations Open access
Semantic Scholar
Consequences of stop codon reassignment on protein evolution in ciliates with alternative genetic codes.
K. Ring, Andre R. O. Cavalcanti
2007Molecular biology and evolution12 citations Open access
Semantic Scholar
Carbon and nitrogen in the topsoils of Inceptisols and Mollisols under native sage scrub and non-native grasslands in southern California
Tal Caspi, L. Estrada, Anna Dowling, Erin Su +5 more
2018Geoderma Regional11 citations
Semantic Scholar
Ambushing the ambush hypothesis: predicting and evaluating off-frame codon frequencies in Prokaryotic Genomes
D. Morgens, Charlotte H. Chang, Andre R. O. Cavalcanti
2013BMC Genomics11 citations Open access
Semantic Scholar
A Model for the Evolution of Extremely Fragmented Macronuclei in Ciliates
D. Morgens, Kristen M. Lindbergh, Marie Adachi, A. Radunskaya +1 more
2013PLoS ONE10 citations Open access
Semantic Scholar
1+1 = 3: A Fusion of 2 Enzymes in the Methionine Salvage Pathway of Tetrahymena thermophila Creates a Trifunctional Enzyme That Catalyzes 3 Steps in the Pathway
Hannah M. W. Salim, M. C. Negritto, Andre R. O. Cavalcanti
2009PLoS Genetics10 citations Open access
Semantic Scholar
Insights into a Biological Computer: Detangling Scrambled Genes in Ciliates
Andre R. O. Cavalcanti, L. Landweber
2006Nanotechnology9 citations
Semantic Scholar
Selection for tandem stop codons in ciliate species with reassigned stop codons
Ira Fleming, Andre R. O. Cavalcanti
2019PLoS ONE8 citations Open access
Semantic Scholar
Novel population genetics in ciliates due to life cycle and nuclear dimorphism.
D. Morgens, Timothy C Stutz, Andre R. O. Cavalcanti
2014Molecular biology and evolution8 citations Open access
Semantic Scholar
Soil bacterial assemblage responses to wildfire in low elevation southern California habitats
E. Cox, Andre R. O. Cavalcanti, E. Crane, W. Meyer
2022PLoS ONE6 citations Open access
Semantic Scholar
Amitotic chromosome loss predicts distinct patterns of senescence and non-senescence in ciliates.
D. Morgens, Andre R. O. Cavalcanti
2015Protist5 citations
Semantic Scholar
On the Paucity of Duplicated Genes in Caenorhabditis elegans Operons
Andre R. O. Cavalcanti, N. Stover, L. Landweber
2006Journal of Molecular Evolution5 citations
Semantic Scholar
Flower-Visiting Insect Assemblages on Fall-Blooming Native California Sage Scrub Shrubs
Sofia Dartnell, Andre R. O. Cavalcanti, Ayame Misaki Bluebell, N. Hamlett +2 more
2022Diversity2 citations Open access
Semantic Scholar
Erratum: Reciprocal fusions of two genes in the formaldehyde detoxification pathway in ciliates and diatoms (Molecular Biology and Evolution (2005) 22 (1539-1542) doi:10.1093/molbev/msi151)
N. Stover, Andre R. O. Cavalcanti, Anya J Li, B. Richardson +1 more
20052 citations Open access
Semantic Scholar
Genetic code: what nature missed.
Andre R. O. Cavalcanti, L. Landweber
2003Current Biology2 citations Open access
Semantic Scholar
Effects of Mustard Invasions on Soil Microbial Abundances and Fungal Assemblages in Southern California
Zachary R. Wakefield, Andre R. O. Cavalcanti, Lucía Driessen, A. Jaramillo +3 more
2023Diversity1 citations Open access
Semantic Scholar
Ambushing the ambush hypothesis: predicting and evaluating off-frame codon frequencies in Prokaryotic Genomes
D. Morgens, Charlotte H. Chang, Andre R. O. Cavalcanti
2013BMC Genomics1 citations Open access
Semantic Scholar
Identifying CoADR and Npsr Function: A Metagenomic Analysis of The Sulfur Reducing Capabilities of CoADR and Npsr
Max Wragan, E. Crane, Andre R. O. Cavalcanti, Archie Spindler
2020The FASEB Journal0 citations Open access
Semantic Scholar

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L. Landweber×14
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L. Landweber — researcher profile on SciRah
N. Stover×7
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D. Morgens×6
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Hannah M. W. Salim×3

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Han Liang — researcher profile on SciRah