Skip to content

Home Search Authors Pakistan News Saved

SciRah

SciRah does not host or store research papers. Results come live from free, official scholarly APIs, and every paper links back to its original source.

Data sources

OpenAlex
Semantic Scholar
Crossref
CORE
arXiv
PubMed

Privacy policy Terms of service

J. Graber · SciRah

Researcher profile · Semantic Scholar

J. Graber

Share profile

J. Graber — researcher profile on SciRah

h-index: 26
Works: 75
Citations: 3,743

Most-cited papers

Retrotransposons regulate host genes in mouse oocytes and preimplantation embryos.
A. Peaston, A. Evsikov, J. Graber, W. D. de Vries +3 more
2004Developmental Cell674 citations Open access
Semantic Scholar
A customized and versatile high-density genotyping array for the mouse
Hyuna Yang, Yue-Ming Ding, L. Hutchins, J. Szatkiewicz +5 more
2009Nature Methods279 citations Open access
Semantic Scholar
In silico detection of control signals: mRNA 3'-end-processing sequences in diverse species.
J. Graber, C. Cantor, S. Mohr, T. Smith
1999Proceedings of the National Academy of Sciences of the United States of America249 citations Open access
Semantic Scholar
Signals for pre-mRNA cleavage and polyadenylation
Bin Tian, J. Graber
2011Wiley Interdisciplinary Reviews - RNA232 citations Open access
Semantic Scholar
Cracking the egg: molecular dynamics and evolutionary aspects of the transition from the fully grown oocyte to embryo.
A. Evsikov, J. Graber, J. Brockman, A. Hampl +5 more
2006Genes & Development185 citations Open access
Semantic Scholar
A ubiquitous and conserved signal for RNA localization in chordates.
J. Betley, M. Frith, J. Graber, Soheun Choo +1 more
2002Current Biology168 citations Open access
Semantic Scholar
The Recombinational Anatomy of a Mouse Chromosome
K. Paigen, J. Szatkiewicz, Kathryn Sawyer, N. Leahy +5 more
2008PLoS Genetics157 citations Open access
Semantic Scholar
Global changes in processing of mRNA 3′ untranslated regions characterize clinically distinct cancer subtypes
Priyam Singh, T. Alley, S. M. Wright, S. Kamdar +4 more
2009Cancer Research154 citations Open access
Semantic Scholar
Genomic detection of new yeast pre-mRNA 3'-end-processing signals.
J. Graber, C. Cantor, S. Mohr, T. Smith
1999Nucleic Acids Research141 citations Open access
Semantic Scholar
Position-dependent motif characterization using non-negative matrix factorization
L. Hutchins, Sean M. Murphy, Priyam Singh, J. Graber
2008Bioinform.140 citations Open access
Semantic Scholar
Systematic variation in mRNA 3′-processing signals during mouse spermatogenesis
Donglin Liu, J. Brockman, Brinda Dass, L. Hutchins +4 more
2006Nucleic Acids Research131 citations Open access
Semantic Scholar
Probabilistic prediction of Saccharomyces cerevisiae mRNA 3'-processing sites.
J. Graber, Gregory D McAllister, T. Smith
2002Nucleic Acids Research121 citations Open access
Semantic Scholar
Gene-specific RNA pol II phosphorylation and the "CTD code"
Hyunmin Kim, Benjamin Erickson, Wei-Fei Luo, D. Seward +4 more
2010Nature Structural &Molecular Biology112 citations Open access
Semantic Scholar
S100A4 is a biomarker and regulator of glioma stem cells that is critical for mesenchymal transition in glioblastoma
Kin-hoe Chow, H. Park, J. George, Keiko Yamamoto +8 more
2017Cancer Research108 citations Open access
Semantic Scholar
Evidence of a Large-Scale Functional Organization of Mammalian Chromosomes
P. Petkov, J. Graber, G. Churchill, K. DiPetrillo +2 more
2005PLoS Biology100 citations Open access
Semantic Scholar
RNA-Seq Alignment to Individualized Genomes Improves Transcript Abundance Estimates in Multiparent Populations
Steven C. Munger, N. Raghupathy, Kwangbom Choi, Al Simons +9 more
2014Genetics85 citations Open access
Semantic Scholar
DNA damage induces targeted, genome-wide variation of poly(A) sites in budding yeast
J. Graber, Fathima I. Nazeer, Pei-chun Yeh, Jason N. Kuehner +3 more
2013Genome Research55 citations Open access
Semantic Scholar
A multispecies comparison of the metazoan 3'-processing downstream elements and the CstF-64 RNA recognition motif
Jesse Salisbury, K. W. Hutchison, J. Graber
2006BMC Genomics54 citations Open access
Semantic Scholar
Temporal dynamics of the developing lung transcriptome in three common inbred strains of laboratory mice reveals multiple stages of postnatal alveolar development
Kyle J. Beauchemin, J. Wells, A. Kho, V. Philip +4 more
2016PeerJ53 citations Open access
Semantic Scholar
Quantitative comparison of EST libraries requires compensation for systematic biases in cDNA generation
Donglin Liu, J. Graber
2006BMC Bioinformatics47 citations Open access
Semantic Scholar
C. elegans sequences that control trans-splicing and operon pre-mRNA processing.
J. Graber, Jesse Salisbury, L. Hutchins, T. Blumenthal
2007RNA: A publication of the RNA Society45 citations Open access
Semantic Scholar
Probe-Level Analysis of Expression Microarrays Characterizes Isoform-Specific Degradation during Mouse Oocyte Maturation
Jesse Salisbury, K. W. Hutchison, K. Wigglesworth, J. Eppig +1 more
2009PLoS ONE36 citations Open access
Semantic Scholar
Genomic data analysis workflows for tumors from patient-derived xenografts (PDXs): challenges and guidelines
Xing Y. Woo, Anuj Srivastava, J. Graber, Vinod Yadav +12 more
2019BMC Medical Genomics35 citations Open access
Semantic Scholar
Klf9 is a key feedforward regulator of the transcriptomic response to glucocorticoid receptor activity
Ian M Gans, Ellen I Hartig, Shu-Sen Zhu, A. Tilden +4 more
2019Scientific Reports35 citations Open access
Semantic Scholar
Promiscuous DNA-binding of a mutant zinc finger protein corrupts the transcriptome and diminishes cell viability
K. Gillinder, M. Ilsley, Danitza Nébor, R. Sachidanandam +12 more
2016Nucleic Acids Research35 citations Open access
Semantic Scholar
Patterns of Recombination Activity on Mouse Chromosome 11 Revealed by High Resolution Mapping
Timothy Billings, E. Sargent, J. Szatkiewicz, N. Leahy +7 more
2010PLoS ONE29 citations Open access
Semantic Scholar
Variations in yeast 3'-processing cis-elements correlate with transcript stability.
J. Graber
2003Trends in Genetics25 citations
Semantic Scholar
Reprogramming and differentiation in mammals: motifs and mechanisms
W. D. de Vries, A. Evsikov, Louise J. Brogan, Christopher P. Anderson +3 more
2008Cold Spring Harbor Symposia on Quantitative Biology24 citations Open access
Semantic Scholar
On the normalization of RNA equilibrium free energy to the length of the sequence.
D. Pervouchine, J. Graber, S. Kasif
2003Nucleic Acids Research19 citations Open access
Semantic Scholar
TauCstF-64 Mediates Correct mRNA Polyadenylation and Splicing of Activator and Repressor Isoforms of the Cyclic AMP-Responsive Element Modulator (CREM) in Mouse Testis
P. Grozdanov, Atia Amatullah, J. Graber, C. MacDonald
2015Biology of Reproduction17 citations Open access
Semantic Scholar
Macrophage differentiation is marked by increased abundance of the mRNA 3’ end processing machinery, altered poly(A) site usage, and sensitivity to the level of CstF64
Srimoyee Mukherjee, J. Graber, C. Moore
2022bioRxiv16 citations Open access
Semantic Scholar
Evidence of a large-scale functional organization of mammalian chromosomes.
P. Petkov, J. Graber, G. Churchill, K. DiPetrillo +2 more
2007PLoS Genetics16 citations Open access
Semantic Scholar
Patterns and mechanisms of genome organization in the mouse.
J. Graber, G. Churchill, K. DiPetrillo, B. King +2 more
2006Journal of Experimental Zoology Part A Comparative Experimental Biology16 citations
Semantic Scholar
Differential sequencing with mass spectrometry.
J. Graber, Cassandra L. Smith, C. Cantor
1999Genetic Analysis, Techniques and Applications (GATA)15 citations Open access
Semantic Scholar
A Genomically and Clinically Annotated Patient-Derived Xenograft (PDX) Resource for Preclinical Research in Non-Small Cell Lung Cancer
Xing Y. Woo, Anuj Srivastava, P. Mack, J. Graber +29 more
2022bioRxiv12 citations Open access
Semantic Scholar
Mutant KLF1 in Adult Anemic Nan Mice Leads to Profound Transcriptome Changes and Disordered Erythropoiesis
Danitza Nébor, J. Graber, S. Ciciotte, R. F. Robledo +7 more
2018Scientific Reports12 citations Open access
Semantic Scholar
Reference Trait Analysis Reveals Correlations Between Gene Expression and Quantitative Traits in Disjoint Samples
Daniel A. Skelly, N. Raghupathy, R. F. Robledo, J. Graber +1 more
2018Genetics11 citations Open access
Semantic Scholar
CGDSNPdb: a database resource for error-checked and imputed mouse SNPs
L. Hutchins, Yue-Ming Ding, J. Szatkiewicz, R. von Smith +4 more
2010Database J. Biol. Databases Curation10 citations Open access
Semantic Scholar
Loss of Krüppel-like factor 9 deregulates both physiological gene expression and development
Laura M Drepanos, Ian M Gans, Janelle Grendler, Sophia Guitar +5 more
2023Scientific Reports9 citations Open access
Semantic Scholar
An expanded mouse testis transcriptome and mass spectrometry defines novel proteins
J. Gamble, J. Chick, Kelly Seltzer, J. Graber +3 more
2020Reproduction9 citations Open access
Semantic Scholar
Regulation of the Ysh1 endonuclease of the mRNA cleavage/polyadenylation complex by ubiquitin-mediated degradation
Susan D. Lee, Huiyun Liu, J. Graber, Daniel Heller-Trulli +3 more
2020RNA Biology9 citations Open access
Semantic Scholar
Dna Sequencing After the Human Genome Project
C. Cantor, K. Tang, J. Graber, Maryanne Maloney +5 more
19979 citations
Semantic Scholar
Transcriptomic analysis reveals regulation of adipogenesis via long non-coding RNA, alternative splicing, and alternative polyadenylation
S. M. Mostafa, Luyang Wang, Bin Tian, J. Graber +1 more
2024Scientific Reports8 citations Open access
Semantic Scholar
GLH-1/Vasa represses neuropeptide expression and drives spermiogenesis in the C. elegans germline
Jesse D. Rochester, Hyemin Min, Gita Gajjar, Catherine S. Sharp +5 more
2022Developmental Biology7 citations Open access
Semantic Scholar
Ipa1 Is an RNA Polymerase II Elongation Factor that Facilitates Termination by Maintaining Levels of the Poly(A) Site Endonuclease Ysh1
Erika L. Pearson, J. Graber, Susan D. Lee, Kristoph S Naggert +1 more
2019Cell Reports7 citations Open access
Semantic Scholar
Factors that influence response classifications in chemotherapy treated patient-derived xenografts (PDX)
Joan Malcolm, Timothy M. Stearns, S. Airhart, J. Graber +1 more
2019PeerJ7 citations Open access
Semantic Scholar
Interrogating the transcriptome of oocytes and preimplantation embryos.
A. Peaston, J. Graber, B. Knowles, W. D. de Vries
2010Methods in Enzymology4 citations
Semantic Scholar
Examining Potential PFAS Contamination of Private Wells from a High School in Rural Maine
Ludwin Moran Sosa, Ashley Taylor, Alexis C. Garretson, A. Backus +4 more
2024Environmental Health Perspectives3 citations Open access
Semantic Scholar
Differential effects of RASA3 mutations on hematopoiesis are profoundly influenced by genetic background and molecular variant
R. F. Robledo, S. Ciciotte, J. Graber, Yue Zhao +7 more
2020bioRxiv3 citations Open access
Semantic Scholar
Pooling and PCR as a method to combat low frequency gene targeting in mouse embryonic stem cells
Aaron C. Brown, C. Lerner, J. Graber, D. Shaffer +1 more
2006Cytotechnology (Dordrecht)3 citations Open access
Semantic Scholar

Frequent co-authors

Invite them to SciRah by sharing their profile.

L. Hutchins×6
Invite
L. Hutchins — researcher profile on SciRah
P. Petkov×5
Invite
P. Petkov — researcher profile on SciRah
G. Churchill×5
Invite
G. Churchill — researcher profile on SciRah
B. Knowles×4
Invite
B. Knowles — researcher profile on SciRah

×4

Invite

J. Szatkiewicz — researcher profile on SciRah

Invite

C. Cantor — researcher profile on SciRah

Priyam Singh×4

Invite

Priyam Singh — researcher profile on SciRah

Invite

K. Paigen — researcher profile on SciRah

Invite

C. Moore — researcher profile on SciRah

Invite

C. Bult — researcher profile on SciRah

Nathaniel J. Maki×4

Invite

Nathaniel J. Maki — researcher profile on SciRah

Invite

A. Evsikov — researcher profile on SciRah