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Xiao-Bing Shi · SciRah

Researcher profile · Semantic Scholar

Xiao-Bing Shi

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Xiao-Bing Shi — researcher profile on SciRah

h-index: 54
Works: 116
Citations: 16K

Most-cited papers

Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)1
D. Klionsky, Amal Kamal Abdel-Aziz, Sara Abdelfatah, M. Abdellatif +496 more
2021Autophagy4,016 citations Open access
Semantic Scholar
A Functional Link between the Histone Demethylase PHF8 and the Transcription Factor ZNF711 in X-Linked Mental Retardation
D. Kleine-Kohlbrecher, J. Christensen, J. Vandamme, Iratxe Abarrategui +7 more
2010Molecules and Cells764 citations Open access
Semantic Scholar
NSD2 links dimethylation of histone H3 at lysine 36 to oncogenic programming
Alex J. Kuo, Peggie Cheung, Kai-Fu Chen, Barry M. Zee +8 more
2011Molecules and Cells446 citations Open access
Semantic Scholar
TRIM24 links a noncanonical histone signature to breast cancer
Wen-Wei Tsai, Zhanxin Wang, Teresa T. Yiu, K. Akdemir +12 more
2010Nature438 citations Open access
Semantic Scholar
AF9 YEATS Domain Links Histone Acetylation to DOT1L-Mediated H3K79 Methylation
Yuan-Yuan Li, H. Wen, Y. Xi, Kaori Tanaka +8 more
2014Cell376 citations Open access
Semantic Scholar
Molecular Coupling of Histone Crotonylation and Active Transcription by AF9 YEATS Domain
Yuan-Yuan Li, Benjamin R. Sabari, Tatyana Panchenko, H. Wen +10 more
2016Molecules and Cells346 citations Open access
Semantic Scholar
Broad H3K4me3 is associated with increased transcription elongation and enhancer activity at tumor suppressor genes
Kai-Fu Chen, Zhong Chen, Da-Yong Wu, Li-Li Zhang +9 more
2015Nature Genetics329 citations Open access
Semantic Scholar
ZMYND11 links histone H3.3 K36 trimethylation to transcription elongation and tumor suppression
H. Wen, Yuan-Yuan Li, Y. Xi, Shi-Ming Jiang +11 more
2014Nature306 citations Open access
Semantic Scholar
Polycomb PHF19 binds H3K36me3 and recruits PRC2 and demethylase NO66 to embryonic stem cell genes during differentiation
Gerard L. Brien, Guillermo Gambero, D. O'Connell, Emilia Jerman +13 more
2012Nature Structural &Molecular Biology266 citations Open access
Semantic Scholar
SETD6 lysine methylation of RelA couples GLP activity at chromatin to tonic repression of NF-κB signaling
D. Levy, Alex J. Kuo, Yan-Qi Chang, Uwe Schaefer +20 more
2010Nature Immunology241 citations Open access
Semantic Scholar
Lysine methylation: beyond histones.
Xi Zhang, H. Wen, Xiao-Bing Shi
2012Acta Biochimica et Biophysica Sinica237 citations Open access
Semantic Scholar
A Histone Acetyltransferase Regulates Active DNA Demethylation in Arabidopsis
Weiqiang Qian, D. Miki, Heng Zhang, Yun-Hua Liu +14 more
2012Science234 citations Open access
Semantic Scholar
The Taf14 YEATS domain is a reader of histone crotonylation
F. Andrews, Stephen A. Shinsky, Erin K. Shanle, Joseph B. Bridgers +6 more
2016Nature Chemical Biology221 citations Open access
Semantic Scholar
BS69/ZMYND11 Reads and Connects Histone H3.3 Lysine 36 Trimethylation Decorated Chromatin to Regulated Pre-mRNA Processing
R. Guo, Li-Juan Zheng, J. Park, Rui-Tu Lv +16 more
2014Molecules and Cells221 citations Open access
Semantic Scholar
ENL links histone acetylation to oncogenic gene expression in AML
L. Wan, H. Wen, Yuan-Yuan Li, J. Lyu +14 more
2017Nature208 citations Open access
Semantic Scholar
YEATS2 is a selective histone crotonylation reader
Dan Zhao, H. Guan, Shuai Zhao, W. Mi +6 more
2016Cell Research207 citations Open access
Semantic Scholar
Trans-tail regulation of MLL4-catalyzed H3K4 methylation by H4R3 symmetric dimethylation is mediated by a tandem PHD of MLL4.
S. Dhar, Sung-Hun Lee, Pu-Yeh Kan, P. Voigt +4 more
2012Genes & Development193 citations Open access
Semantic Scholar
DTF1 is a core component of RNA-directed DNA methylation and may assist in the recruitment of Pol IV
Heng Zhang, Zeyang Ma, Liang Zeng, Kaori Tanaka +12 more
2013Proceedings of the National Academy of Sciences of the United States of America186 citations Open access
Semantic Scholar
The histone H3K4-specific demethylase KDM5B binds to its substrate and product through distinct PHD fingers
B. J. Klein, Lian-Hua Piao, Y. Xi, Héctor Rincón-Arano +15 more
2014Cell Reports166 citations Open access
Semantic Scholar
Recognition of Histone H3K4 Trimethylation by the Plant Homeodomain of PHF2 Modulates Histone Demethylation*
H. Wen, Jing-Zhi Li, T. Song, Ming Lu +4 more
2010Journal of Biological Chemistry160 citations Open access
Semantic Scholar
Regulation of estrogen receptor α by histone methyltransferase SMYD2-mediated protein methylation
Xi Zhang, Kaori Tanaka, Jiu-Sheng Yan, Jing Li +6 more
2013Proceedings of the National Academy of Sciences of the United States of America159 citations Open access
Semantic Scholar
ZMYND8 reads the dual histone mark H3K4me1-H3K14ac to antagonize the expression of metastasis-linked genes
Na Li, Yuan-Yuan Li, Jie Lv, Xiang-Dong Zheng +14 more
2016Molecules and Cells140 citations Open access
Semantic Scholar
Enhancer transcription reveals subtype-specific gene expression programs controlling breast cancer pathogenesis
H. Franco, Anusha Nagari, V. Malladi, Wen-Qian Li +13 more
2018Genome Research139 citations Open access
Semantic Scholar
YEATS2 links histone acetylation to tumorigenesis of non-small cell lung cancer
W. Mi, H. Guan, J. Lyu, Dan Zhao +12 more
2017Nature Communications138 citations Open access
Semantic Scholar
Emerging roles of lysine methylation on non-histone proteins
Xi Zhang, Yaling Huang, Xiao-Bing Shi
2015Cellular and Molecular Life Sciences129 citations Open access
Semantic Scholar
Recognition of histone acetylation by the GAS41 YEATS domain promotes H2A.Z deposition in non-small cell lung cancer
Chih-Chao Hsu, Jiejun Shi, Chao Yuan, Dan Zhao +7 more
2018Genes & Development109 citations Open access
Semantic Scholar
ZZ-dependent regulation of p62/SQSTM1 in autophagy
Yi Zhang, Su-Ran Mun, J. Linares, Jaewoo Ahn +11 more
2018Nature Communications97 citations Open access
Semantic Scholar
PHF6 regulates cell cycle progression by suppressing ribosomal RNA synthesis
Jiadong Wang, J. W. Leung, Zihua Gong, Lin Feng +2 more
2012Epigenetics & Chromatin95 citations Open access
Semantic Scholar
Histone H3K23-specific acetylation by MORF is coupled to H3K14 acylation
B. J. Klein, Suk-Min Jang, C. Lachance, W. Mi +20 more
2019Nature Communications94 citations Open access
Semantic Scholar
The MBT Repeats of L3MBTL1 Link SET8-mediated p53 Methylation at Lysine 382 to Target Gene Repression*
Lisandra E. West, Siddhartha Roy, Karin Lachmi-Weiner, R. Hayashi +4 more
2010Journal of Biological Chemistry93 citations Open access
Semantic Scholar
PRMT1 loss sensitizes cells to PRMT5 inhibition
Guozhen Gao, Liang Zhang, Oscar D Villarreal, Wei He +7 more
2019Nucleic Acids Research90 citations Open access
Semantic Scholar
Structure-guided development of YEATS domain inhibitors by targeting π-π-π stacking
Xin Li, Xiao-Meng Li, Yi-Xiang Jiang, Zheng Liu +10 more
2018Nature Chemical Biology88 citations Open access
Semantic Scholar
Methylation by Set9 modulates FoxO3 stability and transcriptional activity
Daniel R. Calnan, A. Webb, Jamie L. White, Timothy R. Stowe +7 more
2012Aging86 citations Open access
Semantic Scholar
Histone H3.3 G34 mutations alter histone H3K36 and H3K27 methylation in cis
Leilei Shi, Jiejun Shi, Xiao-Bing Shi, Wei Li +1 more
2018Journal of Molecular Biology80 citations Open access
Semantic Scholar
The histone variant H3.3 in transcriptional regulation and human disease
Leilei Shi, H. Wen, Xiao-Bing Shi
2016Journal of Molecular Biology77 citations Open access
Semantic Scholar
BMI1 regulates androgen receptor in prostate cancer independently of the polycomb repressive complex 1
Sen Zhu, Dongyu Zhao, Lin Yan, Weihua Jiang +15 more
2018Nature Communications76 citations Open access
Semantic Scholar
The ZZ domain of p300 mediates specificity of the adjacent HAT domain for histone H3
Yi Zhang, Yongming Xue, Jiejun Shi, Jaewoo Ahn +8 more
2018Nature Structural & Molecular Biology75 citations Open access
Semantic Scholar
Histone modification profiling in breast cancer cell lines highlights commonalities and differences among subtypes
Y. Xi, Jiejun Shi, Wen-Qian Li, Kaori Tanaka +16 more
2018BMC Genomics70 citations Open access
Semantic Scholar
The ZZ-type zinc finger of ZZZ3 modulates the ATAC complex-mediated histone acetylation and gene activation
W. Mi, Yi Zhang, J. Lyu, Xiaolu Wang +8 more
2018Nature Communications70 citations Open access
Semantic Scholar
Molecular insights into the recognition of N-terminal histone modifications by the BRPF1 bromodomain
Amanda Poplawski, K. Hu, Woonghee Lee, S. Natesan +6 more
2013Journal of Molecular Biology68 citations Open access
Semantic Scholar
Gas41 links histone acetylation to H2A.Z deposition and maintenance of embryonic stem cell identity
Chih-Chao Hsu, Dan Zhao, Jiejun Shi, Danni Peng +7 more
2018Cell Discovery66 citations Open access
Semantic Scholar
Histone benzoylation serves as an epigenetic mark for DPF and YEATS family proteins
X. Ren, Yang Zhou, Zhaoyu Xue, Ning Hao +5 more
2020Nucleic Acids Research64 citations Open access
Semantic Scholar
G9a-mediated methylation of ERα links the PHF20/MOF histone acetyltransferase complex to hormonal gene expression
Xi Zhang, Danni Peng, Y. Xi, Chao-Xing Yuan +8 more
2016Nature Communications63 citations Open access
Semantic Scholar
De novo identification of essential protein domains from CRISPR-Cas9 tiling-sgRNA knockout screens
Wei He, Liang Zhang, Oscar D Villarreal, Rongjie Fu +8 more
2019Nature Communications62 citations Open access
Semantic Scholar
Structural insights into estrogen receptor α methylation by histone methyltransferase SMYD2, a cellular event implicated in estrogen signaling regulation.
Yuanyuan Jiang, Laura Trescott, Joshua Holcomb, Xi Zhang +4 more
2014Journal of Molecular Biology56 citations
Semantic Scholar
Structural insights into the π-π-π stacking mechanism and DNA-binding activity of the YEATS domain
B. J. Klein, K. R. Vann, F. Andrews, W. W. Wang +11 more
2018Nature Communications52 citations Open access
Semantic Scholar
Wnt-Induced Stabilization of KDM4C Is Required for Wnt/β-Catenin Target Gene Expression and Glioblastoma Tumorigenesis
Yaohui Chen, R. Fang, Chen Yue, G. Chang +8 more
2019Cancer Research49 citations Open access
Semantic Scholar
TRIM24 Links Glucose Metabolism with Transformation of Human Mammary Epithelial Cells
T. Pathiraja, Kaushik N. Thakkar, Shi-Ming Jiang, S. Stratton +9 more
2014Oncogene49 citations Open access
Semantic Scholar
Selective binding of the PHD6 finger of MLL4 to histone H4K16ac links MLL4 and MOF
Yi Zhang, Younghoon Jang, Ji-Eun Lee, Jaewoo Ahn +13 more
2019Nature Communications48 citations Open access
Semantic Scholar
Recognition of histone H3K14 acylation by MORF
B. J. Klein, Johayra Simithy, Xiaolu Wang, Jaewoo Ahn +6 more
2017Structure48 citations Open access
Semantic Scholar

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