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D. Miki · SciRah

Researcher profile · Semantic Scholar

D. Miki

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D. Miki — researcher profile on SciRah

h-index: 32
Works: 62
Citations: 4,067

Most-cited papers

Simple RNAi vectors for stable and transient suppression of gene function in rice.
D. Miki, K. Shimamoto
2004Plant and Cell Physiology529 citations Open access
Semantic Scholar
RNA Silencing of Single and Multiple Members in a Gene Family of Rice1[w]
D. Miki, Rika Itoh, K. Shimamoto
2005Plant Physiology314 citations Open access
Semantic Scholar
An RNA polymerase II- and AGO4-associated protein acts in RNA-directed DNA methylation
Zhihuan Gao, Hailiang Liu, L. Daxinger, O. Pontes +15 more
2010Nature266 citations Open access
Semantic Scholar
A Histone Acetyltransferase Regulates Active DNA Demethylation in Arabidopsis
Weiqiang Qian, D. Miki, Heng Zhang, Yun-Hua Liu +14 more
2012Science234 citations Open access
Semantic Scholar
CRISPR/Cas9-mediated gene targeting in Arabidopsis using sequential transformation
D. Miki, Wenxin Zhang, Wenjie Zeng, Zheng-Yan Feng +1 more
2018Nature Communications222 citations Open access
Semantic Scholar
The genome of broomcorn millet
C. Zou, Lei-Ting Li, D. Miki, Delin Li +21 more
2019Nature Communications181 citations Open access
Semantic Scholar
ROS3, an RNA-binding protein required for DNA demethylation in Arabidopsis
Xianwu Zheng, O. Pontes, Jian-Hua Zhu, D. Miki +6 more
2008Nature167 citations Open access
Semantic Scholar
Analysis of the Rac/Rop small GTPase family in rice: expression, subcellular localization and role in disease resistance.
Le-Tian Chen, Kenji Shiotani, Takashi Togashi, D. Miki +4 more
2010Plant and Cell Physiology134 citations Open access
Semantic Scholar
Insights into the Localization and Function of the Membrane Trafficking Regulator GNOM ARF-GEF at the Golgi Apparatus in Arabidopsis[W]
S. Naramoto, M. Otegui, N. Kutsuna, R. De Rycke +8 more
2014The Plant Cell131 citations Open access
Semantic Scholar
The methyl-CpG-binding protein MBD7 facilitates active DNA demethylation to limit DNA hyper-methylation and transcriptional gene silencing
Zhao-Bo Lang, Mingguang Lei, Xingang Wang, Kai Tang +13 more
2015Molecules and Cells126 citations Open access
Semantic Scholar
Mussel Adhesive Plaque Protein Gene Is a Novel Member of Epidermal Growth Factor-like Gene Family (*)
Koji Inoue, Y. Takeuchi, D. Miki, S. Odo
1995Journal of Biological Chemistry126 citations Open access
Semantic Scholar
Overproduction of stomatal lineage cells in Arabidopsis mutants defective in active DNA demethylation
Chizuko Yamamuro, D. Miki, Zhimin Zheng, Jun Ma +4 more
2014Nature Communications108 citations Open access
Semantic Scholar
Arabidopsis EDM2 promotes IBM1 distal polyadenylation and regulates genome DNA methylation patterns
Mingguang Lei, Honggui La, Kun Lu, Pengcheng Wang +15 more
2013Proceedings of the National Academy of Sciences of the United States of America101 citations Open access
Semantic Scholar
A pair of transposon-derived proteins function in a histone acetyltransferase complex for active DNA demethylation
Cheng-Guo Duan, Xingang Wang, Shao-Jun Xie, Li Pan +14 more
2016Cell Research91 citations Open access
Semantic Scholar
A DNA 3′-phosphatase functions in active DNA demethylation in Arabidopsis
M. I. Martinez-Macias, Weiqiang Qian, D. Miki, O. Pontes +7 more
2012Molecules and Cells91 citations Open access
Semantic Scholar
Histone acetylation recruits the SWR1 complex to regulate active DNA demethylation in Arabidopsis
Wen-Feng Nie, Mingguang Lei, Mingxuan Zhang, Kai Tang +19 more
2019Proceedings of the National Academy of Sciences of the United States of America86 citations Open access
Semantic Scholar
Sulfamethazine Suppresses Epigenetic Silencing in Arabidopsis by Impairing Folate Synthesis[W]
Hui-Ming Zhang, Xiangyang Deng, D. Miki, S. Cutler +4 more
2012The Plant Cell86 citations Open access
Semantic Scholar
DNA demethylases are required for myo-inositol-mediated mutualism between plants and beneficial rhizobacteria
J. I. Vílchez, Yu Yang, Danxia He, Hailing Zi +13 more
2020Nature Plants84 citations
Semantic Scholar
RNAi-mediated silencing of OsGEN-L (OsGEN-like), a new member of the RAD2/XPG nuclease family, causes male sterility by defect of microspore development in rice.
Satoru Moritoh, D. Miki, M. Akiyama, Mihoko Kawahara +3 more
2005Plant and Cell Physiology80 citations
Semantic Scholar
A Pre-mRNA-Splicing Factor Is Required for RNA-Directed DNA Methylation in Arabidopsis
Chao-Feng Huang, D. Miki, Kai Tang, Hao-Ran Zhou +8 more
2013PLoS Genetics74 citations Open access
Semantic Scholar
DNA Replication Factor C1 Mediates Genomic Stability and Transcriptional Gene Silencing in Arabidopsis[W][OA]
Qian Liu, Junguo Wang, D. Miki, R. Xia +5 more
2010The Plant Cell62 citations Open access
Semantic Scholar
Small interfering RNA (siRNA) targeting of endogenous promoters induces DNA methylation, but not necessarily gene silencing, in rice.
Yosuke Okano, D. Miki, K. Shimamoto
2008The Plant Journal62 citations Open access
Semantic Scholar
DNA demethylase ROS1 negatively regulates the imprinting of DOGL4 and seed dormancy in Arabidopsis thaliana
Haifeng Zhu, Wenxiang Xie, Dachao Xu, D. Miki +3 more
2018Proceedings of the National Academy of Sciences of the United States of America56 citations Open access
Semantic Scholar
Four putative SWI2/SNF2 chromatin remodelers have dual roles in regulating DNA methylation in Arabidopsis
Dong-Lei Yang, Gui-Ping Zhang, Lili Wang, Jingwen Li +9 more
2018Cell Discovery47 citations Open access
Semantic Scholar
Regulation of Active DNA Demethylation by an α-Crystallin Domain Protein in Arabidopsis
Weiqiang Qian, D. Miki, Mingguang Lei, Xiao-Hong Zhu +8 more
2014Molecules and Cells47 citations Open access
Semantic Scholar
The developmental regulator PKL is required to maintain correct DNA methylation patterns at RNA-directed DNA methylation loci
Rong Yang, Zhimin Zheng, Qing Chen, Lan Yang +10 more
2017Genome Biology44 citations Open access
Semantic Scholar
Cloning, sequencing and sites of expression of genes for the hydroxyarginine-containing adhesive-plaque protein of the mussel Mytilus galloprovincialis.
Koji Inoue, Yasuhiro Takeuchi, D. Miki, Satoshi Odo +2 more
1996European Journal of Biochemistry44 citations
Semantic Scholar
Two florigens and a florigen-like protein form a triple regulatory module at the shoot apical meristem to promote reproductive transitions in rice
Francescarancesca Giaume, Giulia Ave Bono, D. Martignago, Y. Miao +18 more
2023Nature Plants43 citations
Semantic Scholar
Efficient Generation of diRNAs Requires Components in the Posttranscriptional Gene Silencing Pathway
D. Miki, P. Zhu, Wencan Zhang, Yan-Fei Mao +8 more
2017Scientific Reports43 citations Open access
Semantic Scholar
Roles of DEMETER in regulating DNA methylation in vegetative tissues and pathogen resistance
Wenjie Zeng, Huan-Wei Huang, Xueqiang Lin, Chen Zhu +6 more
2020Journal of Integrative Plant Biology39 citations Open access
Semantic Scholar
Knock-down of OsDCL2 in rice negatively affects maintenance of the endogenous dsRNA virus, Oryza sativa endornavirus.
Syun-ichi Urayama, H. Moriyama, Nanako Aoki, Y. Nakazawa +5 more
2010Plant and Cell Physiology36 citations Open access
Semantic Scholar
De novo DNA methylation induced by siRNA targeted to endogenous transcribed sequences is gene-specific and OsMet1-independent in rice.
D. Miki, K. Shimamoto
2008The Plant Journal35 citations Open access
Semantic Scholar
Gene targeting in Arabidopsis via an all‐in‐one strategy that uses a translational enhancer to aid Cas9 expression
Fangnan Peng, Wenxin Zhang, Wenjie Zeng, Jian-Kang Zhu +1 more
2019Plant Biotechnology Journal29 citations Open access
Semantic Scholar
Fusion of the Dhfr/Mtx and IR/MAR Gene Amplification Methods Produces a Rapid and Efficient Method for Stable Recombinant Protein Production
Chiemi Noguchi, Y. Araki, D. Miki, N. Shimizu
2012PLoS ONE28 citations Open access
Semantic Scholar
Expression sites of two byssal protein genes of Mytilus galloprovincialis.
D. Miki, Y. Takeuchi, Koji Inoue, S. Odo
1996The Biological Bulletin28 citations
Semantic Scholar
Properties of primary cilia in melanin-concentrating hormone receptor 1-bearing hippocampal neurons in vivo and in vitro.
Y. Kobayashi, Tomoya Okada, D. Miki, Yuko Sekino +4 more
2020Neurochemistry International22 citations Open access
Semantic Scholar
Cultured mussel foot cells expressing byssal protein genes
Y. Takeuchi, Koji Inoue, D. Miki, S. Odo +1 more
199922 citations
Semantic Scholar
SAC3B, a central component of the mRNA export complex TREX-2, is required for prevention of epigenetic gene silencing in Arabidopsis
Yu Yang, Honggui La, Kai Tang, D. Miki +11 more
2016Nucleic Acids Research20 citations Open access
Semantic Scholar
Genome-wide distribution and functions of the AAE complex in epigenetic regulation in Arabidopsis.
Yi-Zhe Zhang, Juncheng Lin, Z. Ren, Chunxiang Chen +9 more
2021Journal of Integrative Plant Biology18 citations
Semantic Scholar
CRISPR/Cas9-Based Genome Editing Toolbox for Arabidopsis thaliana.
D. Miki, Gaurav Zinta, Wenxin Zhang, Fangnan Peng +2 more
2021Methods in molecular biology17 citations
Semantic Scholar
Characterization of Functional Primary Cilia in Human Induced Pluripotent Stem Cell-Derived Neurons
D. Miki, Y. Kobayashi, Tomoya Okada, T. Miyamoto +5 more
2019Neurochemical Research15 citations
Semantic Scholar
Insights into the molecular mechanisms of CRISPR/Cas9-mediated gene targeting at multiple loci in Arabidopsis.
Zhengjing Zhang, Wenjie Zeng, Wenxin Zhang, Jing Li +12 more
2022Plant Physiology13 citations Open access
Semantic Scholar
Gene Targeting Facilitated by Engineered Sequence-Specific Nucleases: Potential Applications for Crop Improvement
D. Miki, Rui Wang, Jing Li, D. Kong +2 more
2021Plant and Cell Physiology12 citations Open access
Semantic Scholar
Involvement of Multiple Gene-Silencing Pathways in a Paramutation-like Phenomenon in Arabidopsis
Zhimin Zheng, Hasi Yu, D. Miki, Dan Jin +5 more
2015Cell Reports12 citations Open access
Semantic Scholar
Inorganic arsenic exposure induces E2F‐dependent G0/G1 arrest via an increase in retinoblastoma family protein p130 in B‐cell lymphoma A20 cells
Kazuyuki Okamura, D. Miki, K. Nohara
2013Genes to Cells10 citations Open access
Semantic Scholar
Precise and heritable gene targeting in rice using a sequential transformation strategy
Wenxin Zhang, Rui Wang, Dali Kong, Fangnan Peng +10 more
2023Cell Reports Methods9 citations Open access
Semantic Scholar
CD105 maintains the thermogenic program of beige adipocytes by regulating Smad2 signaling.
Ryoko Higa, Toshikatsu Hanada, Hitoshi Teranishi, D. Miki +8 more
2018Molecular and Cellular Endocrinology8 citations Open access
Semantic Scholar
Mussel foot protein genes : Structure and variations
Koji Inoue, Y. Takeuchi, D. Miki, S. Odo
19958 citations
Semantic Scholar
Three highly conserved hydrophobic residues in the predicted α2 helix of rice NLR protein Pit contribute to its localization and immune induction.
Qiong Wang, Yu-Ying Li, K. Kosami, Chao Liu +4 more
2022Plant, Cell and Environment5 citations Open access
Semantic Scholar
Molecular signaling in disease resistance of rice
K. Shimamoto, A. Nakashima, Masayuki Fujiwara, P. Nguyen +9 more
20073 citations
Semantic Scholar

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