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H. Innan · SciRah

Researcher profile · Semantic Scholar

H. Innan

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H. Innan — researcher profile on SciRah

h-index: 43
Works: 132
Citations: 8,413

Most-cited papers

QTL-seq: rapid mapping of quantitative trait loci in rice by whole genome resequencing of DNA from two bulked populations.
Hiroki Takagi, A. Abe, Kentaroh Yoshida, Shunichi Kosugi +10 more
2013The Plant Journal1,323 citations
Semantic Scholar
The evolution of gene duplications: classifying and distinguishing between models
H. Innan, F. Kondrashov
2010Nature reviews genetics1,301 citations
Semantic Scholar
Genome sequencing reveals agronomically important loci in rice using MutMap
A. Abe, Shunichi Kosugi, Kentaro Yoshida, Satoshi Natsume +10 more
2012Nature Biotechnology1,220 citations
Semantic Scholar
Variations in Hd1 proteins, Hd3a promoters, and Ehd1 expression levels contribute to diversity of flowering time in cultivated rice
Yasuyuki Takahashi, Kosuke M. Teshima, Shuji Yokoi, H. Innan +1 more
2009Proceedings of the National Academy of Sciences of the United States of America295 citations Open access
Semantic Scholar
Artificial selection for a green revolution gene during japonica rice domestication
K. Asano, M. Yamasaki, S. Takuno, K. Miura +10 more
2011Proceedings of the National Academy of Sciences of the United States of America186 citations Open access
Semantic Scholar
Nonindependent Domestication of the Two Rice Subspecies, Oryza sativa ssp. indica and ssp. japonica, Demonstrated by Multilocus Microsatellites
Li-Zhi Gao, H. Innan
2008Genetics98 citations Open access
Semantic Scholar
An explicit signature of balancing selection for color-vision variation in new world monkeys.
Tomohide Hiwatashi, Yugo Okabe, T. Tsutsui, C. Hiramatsu +7 more
2010Molecular biology and evolution89 citations Open access
Semantic Scholar
Confounding Factors in HGT Detection: Statistical Error, Coalescent Effects, and Multiple Solutions
Cuong V. Than, Derek A. Ruths, H. Innan, L. Nakhleh
2007J. Comput. Biol.87 citations Open access
Semantic Scholar
Detecting Local Adaptation Using the Joint Sampling of Polymorphism Data in the Parental and Derived Populations
H. Innan, Yuseob Kim
2008Genetics80 citations Open access
Semantic Scholar
High-performance pipeline for MutMap and QTL-seq
Yu Sugihara, L. Young, Hiroki Yaegashi, Satoshi Natsume +6 more
2020bioRxiv79 citations Open access
Semantic Scholar
Replication stress induces accumulation of FANCD2 at central region of large fragile genes
Yusuke Okamoto, Watal M. Iwasaki, Kazuto Kugou, Kazuki Takahashi +15 more
2018Nucleic Acids Research77 citations Open access
Semantic Scholar
On the estimation of the insertion time of LTR retrotransposable elements.
T. Kijima, H. Innan
2010Molecular biology and evolution77 citations Open access
Semantic Scholar
Population genetic models of duplicated genes
H. Innan
2009Genetica77 citations Open access
Semantic Scholar
Neofunctionalization of Duplicated Genes Under the Pressure of Gene Conversion
Kosuke M. Teshima, H. Innan
2008Genetics73 citations Open access
Semantic Scholar
Duplication and Gene Conversion in the Drosophila melanogaster Genome
N. Osada, H. Innan
2008PLoS Genetics67 citations Open access
Semantic Scholar
Recombination yet inefficient selection along the Drosophila melanogaster subgroup's fourth chromosome.
J. Arguello, Yue Zhang, Tomoyuki Kado, Chuan-Zhu Fan +4 more
2010Molecular biology and evolution63 citations Open access
Semantic Scholar
mbs: modifying Hudson's ms software to generate samples of DNA sequences with a biallelic site under selection
Kosuke M. Teshima, H. Innan
2009BMC Bioinformatics59 citations Open access
Semantic Scholar
The Power of the Methods for Detecting Interlocus Gene Conversion
Sayaka P. Mansai, H. Innan
2010Genetics53 citations Open access
Semantic Scholar
The Evolutionary Rate of Duplicated Genes Under Concerted Evolution
S. Mano, H. Innan
2008Genetics53 citations Open access
Semantic Scholar
Horizontal Gene Transfer in Five Parasite Plant Species in Orobanchaceae
Tomoyuki Kado, H. Innan
2018Genome Biology and Evolution52 citations Open access
Semantic Scholar
Genome analyses reveal the hybrid origin of the staple crop white Guinea yam (Dioscorea rotundata)
Yu Sugihara, K. Darkwa, Hiroki Yaegashi, Satoshi Natsume +20 more
2020Proceedings of the National Academy of Sciences of the United States of America51 citations Open access
Semantic Scholar
Meiotic recombination cold spots in chromosomal cohesion sites
Masaru Ito, Kazuto Kugou, Jeffrey A. Fawcett, S. Mura +3 more
2014Genes to Cells49 citations Open access
Semantic Scholar
Preservation of a Pseudogene by Gene Conversion and Diversifying Selection
S. Takuno, T. Nishio, Y. Satta, H. Innan
2008Genetics45 citations Open access
Semantic Scholar
Neutral and Non-Neutral Evolution of Duplicated Genes with Gene Conversion
Jeffrey A. Fawcett, H. Innan
2011Genes44 citations Open access
Semantic Scholar
Population Genomics of the Fission Yeast Schizosaccharomyces pombe
Jeffrey A. Fawcett, Tetsushi Iida, S. Takuno, R. Sugino +7 more
2014PLoS ONE43 citations Open access
Semantic Scholar
Population genomics in bacteria: a case study of Staphylococcus aureus.
S. Takuno, Tomoyuki Kado, R. Sugino, L. Nakhleh +1 more
2012Molecular biology and evolution42 citations Open access
Semantic Scholar
The Rate and Tract Length of Gene Conversion between Duplicated Genes
Sayaka P. Mansai, Tomoyuki Kado, H. Innan
2011Genes41 citations Open access
Semantic Scholar
Modified Hudson–Kreitman–Aguadé Test and Two-Dimensional Evaluation of Neutrality Tests
H. Innan
2006Genetics40 citations
Semantic Scholar
The Power of QTL Mapping with RILs
S. Takuno, R. Terauchi, H. Innan
2012PLoS ONE39 citations Open access
Semantic Scholar
Gene Duplication and Gene Fusion Are Important Drivers of Tumourigenesis during Cancer Evolution
Cian Glenfield, H. Innan
2021Genes38 citations Open access
Semantic Scholar
An autosomal analysis gives no genetic evidence for complex speciation of humans and chimpanzees.
M. Yamamichi, Jun Gojobori, H. Innan
2012Molecular biology and evolution30 citations Open access
Semantic Scholar
Forward and backward evolutionary processes and allele frequency spectrum in a cancer cell population.
H. Ohtsuki, H. Innan
2017Theoretical Population Biology29 citations Open access
Semantic Scholar
SIMULATION‐BASED LIKELIHOOD APPROACH FOR EVOLUTIONARY MODELS OF PHENOTYPIC TRAITS ON PHYLOGENY
N. Kutsukake, H. Innan
2013Evolution; international journal of organic evolution28 citations
Semantic Scholar
Potential of fish opsin gene duplications to evolve new adaptive functions.
Jun Gojobori, H. Innan
2009Trends in Genetics26 citations Open access
Semantic Scholar
The Evolutionary Dynamics of a Genetic Barrier to Gene Flow: From the Establishment to the Emergence of a Peak of Divergence
T. Sakamoto, H. Innan
2019Genetics25 citations Open access
Semantic Scholar
The Coalescent with Selection on Copy Number Variants
Kosuke M. Teshima, H. Innan
2012Genetics22 citations Open access
Semantic Scholar
Genome-wide SNP analysis of Japanese Thoroughbred racehorses
Jeffrey A. Fawcett, F. Sato, T. Sakamoto, Watal M. Iwasaki +2 more
2019PLoS ONE21 citations Open access
Semantic Scholar
Simulation framework for generating intratumor heterogeneity patterns in a cancer cell population
Watal M. Iwasaki, H. Innan
2017bioRxiv20 citations Open access
Semantic Scholar
The role of gene conversion in preserving rearrangement hotspots in the human genome.
Jeffrey A. Fawcett, H. Innan
2013Trends in Genetics20 citations
Semantic Scholar
FancJ/Brip1 helicase protects against genomic losses and gains in vertebrate cells
H. Kitao, I. Nanda, Ryuichi P. Sugino, A. Kinomura +6 more
2011Genes to Cells19 citations Open access
Semantic Scholar
Efficient inference of bacterial strain trees from genome-scale multilocus data
Cuong V. Than, Ryuichi P. Sugino, H. Innan, L. Nakhleh
2008Intelligent Systems in Molecular Biology19 citations Open access
Semantic Scholar
The Role of Gene Conversion between Transposable Elements in Rewiring Regulatory Networks
Jeffrey A. Fawcett, H. Innan
2019Genome Biology and Evolution18 citations Open access
Semantic Scholar
Natural selection on gene order in the genome reorganization process after whole-genome duplication of yeast.
R. Sugino, H. Innan
2012Molecular biology and evolution17 citations Open access
Semantic Scholar
The Muller's Ratchet and Aging.
D. Govindaraju, H. Innan, R. Veitia
2020Trends in Genetics16 citations Open access
Semantic Scholar
Population Genetics and Molecular Evolution of DNA Sequences in Transposable Elements. I. A Simulation Framework
T. Kijima, H. Innan
2013Genetics16 citations Open access
Semantic Scholar
Competition Between the Sperm of a Single Male Can Increase the Evolutionary Rate of Haploid Expressed Genes
K. Ezawa, H. Innan
2013Genetics14 citations Open access
Semantic Scholar
A unified simulation model for understanding the diversity of cancer evolution
A. Niida, Takanori Hasegawa, H. Innan, T. Shibata +2 more
2019bioRxiv13 citations Open access
Semantic Scholar
Easy-to-use machine learning system for the prediction of IDH mutation and 1p/19q codeletion using MRI images of adult-type diffuse gliomas
Tomohide Nishikawa, F. Ohka, Kosuke Aoki, Hiromichi Suzuki +8 more
2023Brain Tumor Pathology12 citations
Semantic Scholar
Selection fine-tunes the expression of microRNA target genes in Arabidopsis thaliana.
S. Takuno, H. Innan
2011Molecular biology and evolution12 citations Open access
Semantic Scholar
High Similarity between Distantly Related Species of a Plant SINE Family Is Consistent with a Scenario of Vertical Transmission without Horizontal Transfers.
Jeffrey A. Fawcett, H. Innan
2016Molecular biology and evolution11 citations Open access
Semantic Scholar

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