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S. Höhna · SciRah

Researcher profile · Semantic Scholar

S. Höhna

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S. Höhna — researcher profile on SciRah

h-index: 28
Works: 93
Citations: 30K

Most-cited papers

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space
F. Ronquist, Maxim Teslenko, P. van der Mark, D. Ayres +6 more
2012Systematic Biology27K citations Open access
Semantic Scholar
Ecology, Evolution and Organismal Biology Publications Ecology, Evolution and Organismal Biology Revbayes: Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model- Specification Language Software for Systematics and Evolution Revbayes: Bayesian Phylogenetic Inference Using Gr
S. Höhna, Michael J. Landis, T. Heath, N. Lartillot +4 more
591 citations
Semantic Scholar
Critically evaluating the theory and performance of Bayesian analysis of macroevolutionary mixtures
B. R. Moore, S. Höhna, Michael R. May, B. Rannala +1 more
2016Proceedings of the National Academy of Sciences of the United States of America297 citations Open access
Semantic Scholar
Guided tree topology proposals for Bayesian phylogenetic inference.
S. Höhna, A. Drummond
2012Systematic Biology202 citations
Semantic Scholar
Inferring speciation and extinction rates under different sampling schemes.
S. Höhna, T. Stadler, F. Ronquist, T. Britton
2011Molecular biology and evolution172 citations Open access
Semantic Scholar
TESS: an R package for efficiently simulating phylogenetic trees and performing Bayesian inference of lineage diversification rates
S. Höhna, Michael R. May, B. R. Moore
2016Bioinform.152 citations Open access
Semantic Scholar
A Bayesian approach for detecting the impact of mass‐extinction events on molecular phylogenies when rates of lineage diversification may vary
Michael R. May, S. Höhna, B. R. Moore
2016122 citations Open access
Semantic Scholar
Probabilistic Graphical Model Representation in Phylogenetics
S. Höhna, T. Heath, B. Boussau, Michael J. Landis +2 more
2013Systematic Biology121 citations Open access
Semantic Scholar
RevBayes: Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language
S. Höhna, Michael J. Landis, T. Heath, B. Boussau +4 more
2016Systematic Biology119 citations Open access
Semantic Scholar
Testing the role of the Red Queen and Court Jester as drivers of the macroevolution of Apollo butterflies
F. Condamine, J. Rolland, S. Höhna, F. Sperling +1 more
2017bioRxiv110 citations Open access
Semantic Scholar
Cladogenetic and Anagenetic Models of Chromosome Number Evolution: a Bayesian Model Averaging Approach
William A. Freyman, S. Höhna
2016bioRxiv93 citations Open access
Semantic Scholar
RevGadgets: an R Package for visualizing Bayesian phylogenetic analyses from RevBayes
C. Tribble, William A. Freyman, Michael J. Landis, J. Lim +4 more
2021bioRxiv83 citations Open access
Semantic Scholar
Early Arrival and Climatically-Linked Geographic Expansion of New World Monkeys from Tiny African Ancestors
D. Silvestro, M. Tejedor, M. Serrano-Serrano, O. Loiseau +6 more
2018Systematic Biology74 citations Open access
Semantic Scholar
Fast simulation of reconstructed phylogenies under global time-dependent birth-death processes
S. Höhna
2013Bioinform.73 citations Open access
Semantic Scholar
Stochastic Character Mapping of State‐Dependent Diversification Reveals the Tempo of Evolutionary Decline in Self‐Compatible Onagraceae Lineages
William A. Freyman, S. Höhna
2018Systematic Biology64 citations Open access
Semantic Scholar
Convergence Assessment for Bayesian Phylogenetic Analysis using MCMC simulation
Luiza Guimarães Fabreti, S. Höhna
2021bioRxiv61 citations Open access
Semantic Scholar
The time-dependent reconstructed evolutionary process with a key-role for mass-extinction events.
S. Höhna
2013Journal of Theoretical Biology60 citations Open access
Semantic Scholar
Likelihood Inference of Non-Constant Diversification Rates with Incomplete Taxon Sampling
S. Höhna
2014PLoS ONE54 citations Open access
Semantic Scholar
Non-monophyly and intricate morphological evolution within the avian family Cettiidae revealed by multilocus analysis of a taxonomically densely sampled dataset
P. Alström, S. Höhna, Magnus Gelang, P. Ericson +1 more
2011BMC Evolutionary Biology47 citations Open access
Semantic Scholar
A Bayesian Approach for Estimating Branch-Specific Speciation and Extinction Rates
S. Höhna, William A. Freyman, Zachary L. Nolen, J. Huelsenbeck +2 more
2019bioRxiv46 citations Open access
Semantic Scholar
Locally adaptive Bayesian birth-death model successfully detects slow and rapid rate shifts
A. Magee, S. Höhna, Tetyana I. Vasylyeva, A. Leaché +1 more
2019bioRxiv45 citations Open access
Semantic Scholar
Approximate Bayesian Computation of diversification rates from molecular phylogenies: introducing a new efficient summary statistic, the nLTT
Thijs Janzen, S. Höhna, R. Etienne
201540 citations Open access
Semantic Scholar
Phylogenetic Inference Using RevBayes
S. Höhna, Michael J. Landis, T. Heath
2017Current Protocols in Bioinformatics38 citations
Semantic Scholar
Clock-constrained tree proposal operators in Bayesian phylogenetic inference
S. Höhna, M. Defoin-Platel, A. Drummond
2008International Conferences on Biological Information and Biomedical Engineering35 citations
Semantic Scholar
Drift and Directional Selection Are the Evolutionary Forces Driving Gene Expression Divergence in Eye and Brain Tissue of Heliconius Butterflies
A. Catalán, Adriana D. Briscoe, S. Höhna
2018Genetics33 citations Open access
Semantic Scholar
P3: Phylogenetic Posterior Prediction in RevBayes
S. Höhna, L. Coghill, G. Mount, R. C. Thomson +1 more
2018Molecular biology and evolution30 citations Open access
Semantic Scholar
Parallel power posterior analyses for fast computation of marginal likelihoods in phylogenetics
S. Höhna, Michael J. Landis, J. Huelsenbeck
2017bioRxiv30 citations Open access
Semantic Scholar
Bayesian Phylogenetic Inference: Estimating Diversification Rates from Reconstructed Phylogenies
S. Höhna
201129 citations
Semantic Scholar
Rapidly changing speciation and extinction rates can be inferred in spite of nonidentifiability
B. Kopperud, A. Magee, S. Höhna
2022bioRxiv28 citations Open access
Semantic Scholar
The rise of grasslands is linked to atmospheric CO2 decline in the late Palaeogene
L. Palazzesi, Oriane Hidalgo, V. Barreda, F. Forest +1 more
2022Nature Communications26 citations Open access
Semantic Scholar
The rise of grasslands is linked to atmospheric CO2 decline in the late Palaeogene
L. Palazzesi, Oriane Hidalgo, V. Barreda, F. Forest +1 more
2021bioRxiv26 citations Open access
Semantic Scholar
Exploring genome gene content and morphological analysis to test recalcitrant nodes in the animal phylogeny
Ksenia Juravel, L. Porras, S. Höhna, D. Pisani +1 more
2021bioRxiv26 citations Open access
Semantic Scholar
New evidence for the recent divergence of Devil's Hole pupfish and the plausibility of elevated mutation rates in endangered taxa
C. Martin, S. Höhna
2018Molecular Ecology22 citations Open access
Semantic Scholar
Relative Time Constraints Improve Molecular Dating
G. Szöllősi, S. Höhna, T. Williams, D. Schrempf +2 more
2020bioRxiv21 citations Open access
Semantic Scholar
CRABS: Congruent rate analyses in birth–death scenarios
S. Höhna, B. Kopperud, A. Magee
2022Methods in Ecology and Evolution19 citations Open access
Semantic Scholar
The complex effects of demographic history on the estimation of substitution rate: concatenated gene analysis results in no more than twofold overestimation
C. Martin, S. Höhna, Jacob E. Crawford, B. J. Turner +2 more
2017Proceedings of the Royal Society of London. Biological Sciences19 citations Open access
Semantic Scholar
The fundamental role of character coding in Bayesian morphological phylogenetics.
Basanta Khakurel, Courtney Grigsby, Tyler D. Tran, Juned Zariwala +2 more
2024Systematic Biology18 citations Open access
Semantic Scholar
Phylogenetically informative proteins from an Early Miocene rhinocerotid
Ryan S. Paterson, M. Mackie, A. Capobianco, Nicola S. Heckeberg +23 more
2025Nature17 citations Open access
Semantic Scholar
Assessing the Adequacy of Morphological Models using Posterior Predictive Simulations.
Laura P. A. Mulvey, Michael R. May, Jeremy M. Brown, S. Höhna +2 more
2024Systematic Biology16 citations Open access
Semantic Scholar
Nucleotide Substitution Model Selection is not Necessary for Bayesian Inference of Phylogeny with Well Behaved Priors.
Luiza Guimarães Fabreti, S. Höhna
2023Systematic Biology15 citations
Semantic Scholar
Impact of K-Pg Mass Extinction Event on Crocodylomorpha Inferred from Phylogeny of Extinct and Extant Taxa
A. Magee, S. Höhna
2021bioRxiv15 citations Open access
Semantic Scholar
Following the rivers: historical reconstruction of California voles Microtus californicus (Rodentia: Cricetidae) in the deserts of eastern California
C. Conroy, J. L. Patton, Marisa C. W. Lim, M. Phuong +2 more
201613 citations
Semantic Scholar
A Bayesian Approach for Detecting Mass-Extinction Events When Rates of Lineage Diversification Vary
Michael R. May, S. Höhna, B. R. Moore
2015bioRxiv13 citations Open access
Semantic Scholar
Commonly used Bayesian diversification-rate models produce biologically meaningful differences on empirical phylogenies
Jesús Martínez-Gómez, Michael J. Song, C. Tribble, B. Kopperud +4 more
2023bioRxiv12 citations Open access
Semantic Scholar
Genome Evolution in Bacteria Isolated from Million-Year-Old Subseafloor Sediment
W. Orsi, Tobias Magritsch, S. Vargas, Ömer K. Coskun +6 more
2020bioRxiv12 citations Open access
Semantic Scholar
Robustness of Divergence Time Estimation Despite Gene Tree Estimation Error: A Case Study of Fireflies (Coleoptera: Lampyridae).
S. Höhna, Sarah E Lower, P. Duchen, Ana Catalán
2024Systematic Biology11 citations
Semantic Scholar
Bayesian inference of phylogeny is robust to substitution model over-parameterization
Luiza Guimarães Fabreti, S. Höhna
2022bioRxiv11 citations Open access
Semantic Scholar
On the Mkv Model with Among-Character Rate Variation
A. Capobianco, S. Höhna
2024bioRxiv10 citations Open access
Semantic Scholar
Practical Guide and Review of Fossil Tip-Dating in Phylogenetics
Nicola S. Heckeberg, A. Capobianco, Basanta Khakurel, Gustavo Darlim +1 more
2025Systematic Biology9 citations Open access
Semantic Scholar
Inferring the demographic history of the North American firefly Photinus pyralis
A. Catalán, S. Höhna, Sarah E. Lower, P. Duchen
2022Journal of Evolutionary Biology9 citations Open access
Semantic Scholar

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