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A. Colantoni · SciRah

Researcher profile · Semantic Scholar

A. Colantoni

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A. Colantoni — researcher profile on SciRah

h-index: 19
Works: 55
Citations: 2,593

Most-cited papers

Revealing protein–lncRNA interaction
F. Ferrè, A. Colantoni, M. Helmer-Citterich
2015Briefings Bioinform.615 citations Open access
Semantic Scholar
FUS affects circular RNA expression in murine embryonic stem cell-derived motor neurons
Lorenzo Errichelli, Stefano Dini Modigliani, P. Laneve, A. Colantoni +11 more
2017Nature Communications482 citations Open access
Semantic Scholar
Modulation of circRNA Metabolism by m6A Modification.
G. Di Timoteo, Dario Dattilo, Alvaro Centrón-Broco, A. Colantoni +7 more
2020Cell Reports303 citations Open access
Semantic Scholar
catRAPID omics v2.0: going deeper and wider in the prediction of protein–RNA interactions
Alexandros Armaos, A. Colantoni, G. Proietti, Jakob Rupert +1 more
2021Nucleic Acids Res.185 citations Open access
Semantic Scholar
Circular RNA ZNF609/CKAP5 mRNA interaction regulates microtubule dynamics and tumorigenicity
F. Rossi, M. Beltran, Michela Damizia, Chiara Grelloni +9 more
2021Molecules and Cells94 citations Open access
Semantic Scholar
FUS Mutant Human Motoneurons Display Altered Transcriptome and microRNA Pathways with Implications for ALS Pathogenesis
R. De Santis, Laura Santini, A. Colantoni, G. Peruzzi +4 more
2017Stem Cell Reports91 citations Open access
Semantic Scholar
Circ-ZNF609 regulates G1-S progression in rhabdomyosarcoma
F. Rossi, I. Legnini, F. Megiorni, A. Colantoni +6 more
2019Oncogene89 citations Open access
Semantic Scholar
Deficiency in the nuclear long noncoding RNA Charme causes myogenic defects and heart remodeling in mice
M. Ballarino, A. Cipriano, R. Tita, Tiziana Santini +8 more
2018EMBO Journal70 citations Open access
Semantic Scholar
Mutant FUS and ELAVL4 (HuD) Aberrant Crosstalk in Amyotrophic Lateral Sclerosis
R. De Santis, Vincenzo Alfano, V. de Turris, A. Colantoni +12 more
2019Cell Reports66 citations Open access
Semantic Scholar
A longitudinal study defined circulating microRNAs as reliable biomarkers for disease prognosis and progression in ALS human patients
G. Dobrowolny, J. Martone, E. Lepore, Irene Casola +11 more
2021Cell Death Discovery61 citations Open access
Semantic Scholar
The Long Non-coding RNA lnc-31 Interacts with Rock1 mRNA and Mediates Its YB-1-Dependent Translation
D. Dimartino, A. Colantoni, M. Ballarino, J. Martone +6 more
2018Cell Reports53 citations Open access
Semantic Scholar
A Regulatory Circuitry Between Gria2, miR-409, and miR-495 Is Affected by ALS FUS Mutation in ESC-Derived Motor Neurons
Davide Capauto, A. Colantoni, Lei Lu, Tiziana Santini +7 more
2018Molecular Neurobiology43 citations Open access
Semantic Scholar
m6A modification inhibits miRNAs' intracellular function, favoring their extracellular export for intercellular communication.
Sabrina Garbo, Daniel D’Andrea, A. Colantoni, Francesco Fiorentino +6 more
2024Cell Reports41 citations Open access
Semantic Scholar
MicroRNAs from saliva of anopheline mosquitoes mimic human endogenous miRNAs and may contribute to vector-host-pathogen interactions
B. Arcà, A. Colantoni, Carmine Fiorillo, F. Severini +4 more
2019Scientific Reports36 citations Open access
Semantic Scholar
Characterization of the lncRNA transcriptome in mESC-derived motor neurons: Implications for FUS-ALS.
Silvia Biscarini, Davide Capauto, G. Peruzzi, Lei Lu +6 more
2018Stem Cell Research33 citations Open access
Semantic Scholar
Intronic Determinants Coordinate Charme lncRNA Nuclear Activity through the Interaction with MATR3 and PTBP1
Fabio Desideri, A. Cipriano, Silvia Petrezsélyová, G. Buonaiuto +10 more
2020Cell Reports32 citations Open access
Semantic Scholar
Proteomics analysis of FUS mutant human motoneurons reveals altered regulation of cytoskeleton and other ALS-linked proteins via 3′UTR binding
M. G. Garone, Vincenzo Alfano, Beatrice Salvatori, Clarissa Braccia +5 more
2020Scientific Reports26 citations Open access
Semantic Scholar
SMaRT lncRNA controls translation of a G‐quadruplex‐containing mRNA antagonizing the DHX36 helicase
J. Martone, D. Mariani, Tiziana Santini, A. Setti +7 more
2020EMBO Reports26 citations Open access
Semantic Scholar
The reference genome of the human diploid cell line RPE-1
Emilia Volpe, A. Colantoni, Luca Corda, Elena Di Tommaso +9 more
2025Nature Communications24 citations Open access
Semantic Scholar
FUS Alters circRNA Metabolism in Human Motor Neurons Carrying the ALS-Linked P525L Mutation
A. Colantoni, Davide Capauto, Vincenzo Alfano, Eleonora D’Ambra +3 more
2023International Journal of Molecular Sciences19 citations Open access
Semantic Scholar
Epigenetic regulation of Wnt7b expression by the cis-acting long noncoding RNA Lnc-Rewind in muscle stem cells
A. Cipriano, Martina Macino, G. Buonaiuto, Tiziana Santini +5 more
2020bioRxiv19 citations Open access
Semantic Scholar
Cortical neurons obtained from patient-derived iPSCs with GNAO1 p.G203R variant show altered differentiation and functional properties
Maria Cristina Benedetti, T. D'Andrea, A. Colantoni, D. Silachev +16 more
2023bioRxiv17 citations Open access
Semantic Scholar
MicroRNAs and other small RNAs in Aedes aegypti saliva and salivary glands following chikungunya virus infection
Carmine Fiorillo, Pei-Shi Yen, A. Colantoni, Marina Mariconti +4 more
2022Scientific Reports17 citations Open access
Semantic Scholar
Prediction of protein-RNA interactions from single-cell transcriptomic data
Jonathan Fiorentino, Alexandros Armaos, A. Colantoni, G. Tartaglia
2023bioRxiv15 citations Open access
Semantic Scholar
CircVAMP3: A circRNA with a Role in Alveolar Rhabdomyosarcoma Cell Cycle Progression
F. Rossi, Alvaro Centrón-Broco, Dario Dattilo, G. Di Timoteo +4 more
2021Genes15 citations Open access
Semantic Scholar
Zooming in on protein–RNA interactions: a multi-level workflow to identify interaction partners
A. Colantoni, Jakob Rupert, Andrea Vandelli, G. Tartaglia +1 more
2020Biochemical Society Transactions15 citations Open access
Semantic Scholar
A multifunctional locus controls motor neuron differentiation through short and long noncoding RNAs
Andrea Carvelli, A. Setti, Fabio Desideri, S. Galfrè +11 more
2022EMBO Journal12 citations Open access
Semantic Scholar
DBATE: database of alternative transcripts expression
V. Bianchi, A. Colantoni, Alberto C, G. Ausiello +2 more
2013Database J. Biol. Databases Curation12 citations Open access
Semantic Scholar
Negative regulation of miRNA sorting into EVs is mediated by the capacity of RBP PCBP2 to impair the SYNCRIP-dependent miRNA loading
F. Marocco, Sabrina Garbo, Claudia Montaldo, A. Colantoni +10 more
2025eLife10 citations Open access
Semantic Scholar
HuD impairs neuromuscular junctions and induces apoptosis in human iPSC and Drosophila ALS models
Beatrice Silvestri, Michela Mochi, Darilang Mawrie, V. de Turris +10 more
2024Nature Communications10 citations Open access
Semantic Scholar
Trans‐generational epigenetic regulation associated with the amelioration of Duchenne Muscular Dystrophy
J. Martone, Michela Lisi, F. Castagnetti, A. Rosa +9 more
2020EMBO Molecular Medicine10 citations Open access
Semantic Scholar
TGS1 impacts snRNA 3′-end processing, ameliorates survival motor neuron-dependent neurological phenotypes in vivo and prevents neurodegeneration
Lu Chen, Caitlin M. Roake, Paolo Maccallini, Francesca Bavasso +26 more
2022Nucleic Acids Research9 citations Open access
Semantic Scholar
The PRALINE database: protein and Rna humAn singLe nucleotIde variaNts in condEnsates
Andrea Vandelli, Magdalena Arnal Segura, Michele Monti, Jonathan Fiorentino +6 more
2022bioRxiv9 citations Open access
Semantic Scholar
Lnc-SMaRT translational regulation of Spire1, a new player in muscle differentiation.
Silvia Scalzitti, D. Mariani, A. Setti, A. Colantoni +3 more
2021Journal of Molecular Biology7 citations Open access
Semantic Scholar
Cell line-matched reference enables high-precision functional genomics
Luca Corda, Emilia Volpe, Hamza Dallali, Elena Di Tommaso +6 more
2025Nature Communications5 citations Open access
Semantic Scholar
CyCoNP lncRNA establishes cis and trans RNA–RNA interactions to supervise neuron physiology
Fabio Desideri, Alessandro Grazzi, Michela Lisi, A. Setti +7 more
2024Nucleic Acids Research5 citations Open access
Semantic Scholar
The role of low-complexity repeats in RNA–RNA interactions and a deep learning framework for duplex prediction
A. Setti, G. Bini, Flaminia Pellegrini, Valentino Maiorca +11 more
2026Nature Communications4 citations Open access
Semantic Scholar
Alternative splicing tends to avoid partial removals of protein-protein interaction sites
A. Colantoni, V. Bianchi, P. Gherardini, Gianpaolo Scalia Tomba +3 more
2013BMC Genomics4 citations Open access
Semantic Scholar
Transcriptional and epigenetic characterization of a new in vitro platform to model the formation of human pharyngeal endoderm
Andrea Cipriano, A. Colantoni, A. Calicchio, Jonathan Fiorentino +11 more
2024Genome Biology3 citations Open access
Semantic Scholar
Negative regulation of miRNAs sorting in EVs: the RNA-binding protein PCBP2 impairs SYNCRIP-mediated miRNAs EVs loading
F. Marocco, Sabrina Garbo, Claudia Montaldo, A. Colantoni +10 more
2025bioRxiv2 citations Open access
Semantic Scholar
DROSHA, DICER and Damage-Induced long ncRNA control BMI1-dependent transcriptional repression at DNA double-strand break
Francesca Esposito, Ilaria Capozzo, Stefania Modafferi, Ubaldo Gioia +9 more
2024bioRxiv2 citations Open access
Semantic Scholar
CircAFF1 Is a Circular RNA with a Role in Alveolar Rhabdomyosarcoma Cell Migration
Alvaro Centrón-Broco, F. Rossi, Chiara Grelloni, Raffaele Garraffo +6 more
2023Biomedicines2 citations Open access
Semantic Scholar
scRAPID-web: a web server for predicting protein–RNA interactions from single-cell transcriptomics
Jonathan Fiorentino, Alexandros Armaos, Chiara Montrone, A. Colantoni +1 more
2025bioRxiv1 citations Open access
Semantic Scholar
Decoding RNA–RNA Interactions: The Role of Low-Complexity Repeats and a Deep Learning Framework for Sequence-Based Prediction
A. Setti, G. Bini, Flaminia Pellegrini, Valentino Maiorca +11 more
2025bioRxiv0 citations Open access
Semantic Scholar
RNase H1 counteracts DNA damage and ameliorates SMN-dependent phenotypes in a Drosophila model of Spinal Muscular Atrophy
Livia Scatolini, Lucia Graziadio, Damiano Guerrini, Paolo Maccallini +19 more
2025bioRxiv0 citations Open access
Semantic Scholar
HuD (ELAVL4) gain-of-function impairs neuromuscular junctions and induces apoptosis in in vitro and in vivo models of amyotrophic lateral sclerosis
Beatrice Silvestri, Michela Mochi, Darilang Mawrie, V. de Turris +8 more
2024bioRxiv0 citations Open access
Semantic Scholar
Cortical neurons obtained from patient-derived GNAO1 iPSCs show altered differentiation and functional properties
Maria Cristina Benedetti, T. D'Andrea, A. Colantoni, V. de Turris +9 more
20230 citations
Semantic Scholar
HuD (ELAVL4) gain-of-function impairs neuromuscular junctions and induces apoptosis in familial and sporadic amyotrophic lateral sclerosis models
Beatrice Silvestri, Michela Mochi, Darilang Mawrie, V. de Turris +6 more
20230 citations
Semantic Scholar
Multi-omics analysis reveals a crucial role for Retinoic Acid in promoting epigenetic and transcriptional competence of an in vitro model of human Pharyngeal Endoderm
A. Cipriano, A. Colantoni, Danielle Gomes, M. Moqri +9 more
2022bioRxiv0 citations Open access
Semantic Scholar
MicroRNAs and other small RNAs in Aedes aegypti saliva and salivary glands following chikungunya virus infection
Carmine Fiorillo, Pei-Shi Yen, A. Colantoni, Marina Mariconti +4 more
2022Scientific Reports0 citations Open access
Semantic Scholar

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