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Anthony D. Long · SciRah

Researcher profile · Semantic Scholar

Anthony D. Long

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Anthony D. Long — researcher profile on SciRah

h-index: 41
Works: 105
Citations: 10K

Most-cited papers

A Bayesian framework for the analysis of microarray expression data: regularized t -test and statistical inferences of gene changes
P. Baldi, Anthony D. Long
2001Bioinform.1,778 citations
Semantic Scholar
The Molecular Diversity of Adaptive Convergence
O. Tenaillon, Alejandra Rodríguez-Verdugo, R. Gaut, Pamela McDonald +3 more
2012Science768 citations
Semantic Scholar
Patterns of DNA sequence polymorphism along chromosome 1 of maize (Zea mays ssp. mays L.)
M. Tenaillon, M. Sawkins, Anthony D. Long, R. Gaut +2 more
2001Proceedings of the National Academy of Sciences of the United States of America699 citations Open access
Semantic Scholar
Genome-wide analysis of a long-term evolution experiment with Drosophila
M. Burke, J. Dunham, Parvin Shahrestani, Kevin R. Thornton +2 more
2010Nature453 citations
Semantic Scholar
Contiguous and accurate de novo assembly of metazoan genomes with modest long read coverage
M. Chakraborty, James G. Baldwin-Brown, Anthony D. Long, J. J. Emerson
2015bioRxiv448 citations Open access
Semantic Scholar
The power of association studies to detect the contribution of candidate genetic loci to variation in complex traits.
Anthony D. Long, C. Langley
1999Genome Research434 citations Open access
Semantic Scholar
Improved Statistical Inference from DNA Microarray Data Using Analysis of Variance and A Bayesian Statistical Framework
Anthony D. Long, H. Mangalam, Bob Y. P. Chan, L. Tolleri +2 more
2001Journal of Biological Chemistry408 citations Open access
Semantic Scholar
Global gene expression profiling in Escherichia coli K12. The effects of integration host factor.
S. Arfin, Anthony D. Long, E. Ito, L. Tolleri +3 more
2000Journal of Biological Chemistry380 citations Open access
Semantic Scholar
Diversification of complex butterfly wing patterns by repeated regulatory evolution of a Wnt ligand
Arnaud Martin, R. Papa, N. Nadeau, R. I. Hill +7 more
2012Proceedings of the National Academy of Sciences of the United States of America267 citations Open access
Semantic Scholar
Genetic architecture of thermal adaptation in Escherichia coli.
Michelle M. Riehle, A. F. Bennett, Anthony D. Long
2001Proceedings of the National Academy of Sciences of the United States of America262 citations Open access
Semantic Scholar
The Lowdown on Linkage Disequilibrium
B. Gaut, Anthony D. Long
2003The Plant Cell Online257 citations Open access
Semantic Scholar
Elucidating the molecular architecture of adaptation via evolve and resequence experiments
Anthony D. Long, Gianni Liti, A. Lupták, O. Tenaillon
2015Nature reviews genetics241 citations Open access
Semantic Scholar
High resolution mapping of genetic factors affecting abdominal bristle number in Drosophila melanogaster.
Anthony D. Long, Susan L. Mullaney, Lucy A. Reid, J. D. Fry +2 more
1995Genetics218 citations
Semantic Scholar
Genetic dissection of a model complex trait using the Drosophila Synthetic Population Resource
Elizabeth G. King, C. Merkes, Casey L. McNeil, Steven R. Hoofer +4 more
2012Genome Research210 citations Open access
Semantic Scholar
Properties and Power of the Drosophila Synthetic Population Resource for the Routine Dissection of Complex Traits
Elizabeth G. King, S. Macdonald, Anthony D. Long
2012Genetics192 citations Open access
Semantic Scholar
Structural variants exhibit widespread allelic heterogeneity and shape variation in complex traits
M. Chakraborty, J. J. Emerson, S. Macdonald, Anthony D. Long
2019Nature Communications175 citations Open access
Semantic Scholar
Experimental evolution reveals natural selection on standing genetic variation
H. Teotónio, Ivo M. Chelo, Martina Bradic, M. Rose +1 more
2009Nature Genetics163 citations
Semantic Scholar
Contribution of Distal-less to quantitative variation in butterfly eyespots
P. Beldade, P. Brakefield, Anthony D. Long
2002Nature149 citations
Semantic Scholar
Genetic interactions between naturally occurring alleles at quantitative trait loci and mutant alleles at candidate loci affecting bristle number in Drosophila melanogaster.
Anthony D. Long, Susan L. Mullaney, T. Mackay, C. Langley
1996Genetics147 citations
Semantic Scholar
Standing genetic variation drives repeatable experimental evolution in outcrossing populations of Saccharomyces cerevisiae.
M. Burke, Gianni Liti, Anthony D. Long
2014Molecular biology and evolution141 citations Open access
Semantic Scholar
Abundance and Distribution of Transposable Elements in Two Drosophila QTL Mapping Resources
J. Cridland, S. Macdonald, Anthony D. Long, Kevin R. Thornton
2013Molecular biology and evolution128 citations Open access
Semantic Scholar
A Gene-Based Linkage Map for Bicyclus anynana Butterflies Allows for a Comprehensive Analysis of Synteny with the Lepidopteran Reference Genome
P. Beldade, Suzanne V. Saenko, N. Pul, Anthony D. Long
2009PLoS Genetics122 citations Open access
Semantic Scholar
Evolutionary changes in heat-inducible gene expression in lines of Escherichia coli adapted to high temperature.
Michelle M. Riehle, A. F. Bennett, R. Lenski, Anthony D. Long
2003Physiological Genomics111 citations
Semantic Scholar
A wing expressed sequence tag resource for Bicyclus anynana butterflies, an evo-devo model
P. Beldade, S. Rudd, Jonathan D. Gruber, Anthony D. Long
2006BMC Genomics109 citations Open access
Semantic Scholar
A gene necessary for normal male courtship, yellow, acts downstream of fruitless in the Drosophila melanogaster larval brain.
M. Drapeau, Anna Z. Radovic, P. Wittkopp, Anthony D. Long
2003Journal of Neurobiology103 citations
Semantic Scholar
Both naturally occurring insertions of transposable elements and intermediate frequency polymorphisms at the achaete-scute complex are associated with variation in bristle number in Drosophila melanogaster.
Anthony D. Long, R. F. Lyman, Alison H. Morgan, C. Langley +1 more
2000Genetics96 citations
Semantic Scholar
The Power to Detect Quantitative Trait Loci Using Resequenced, Experimentally Evolved Populations of Diploid, Sexual Organisms
James G. Baldwin-Brown, Anthony D. Long, Kevin R. Thornton
2014Molecular biology and evolution94 citations Open access
Semantic Scholar
Dissecting Complex Traits Using the Drosophila Synthetic Population Resource
Anthony D. Long, S. Macdonald, Elizabeth G. King
2014Trends in Genetics78 citations Open access
Semantic Scholar
Molecules versus morphology: the detection of selection acting on morphological characters along a cline in Drosophila melanogaster
Anthony D. Long, R. Singh
1995Heredity77 citations Open access
Semantic Scholar
Properties and Modeling of GWAS when Complex Disease Risk Is Due to Non-Complementing, Deleterious Mutations in Genes of Large Effect
Kevin R. Thornton, Andrew Foran, Anthony D. Long
2013PLoS Genetics73 citations Open access
Semantic Scholar
A cis-regulatory Sequence Within the yellow Locus of Drosophila melanogaster Required for Normal Male Mating Success
M. Drapeau, Shawn A. Cyran, Michaela M. Viering, P. Geyer +1 more
2006Genetics68 citations Open access
Semantic Scholar
Joint Estimates of Quantitative Trait Locus Effect and Frequency Using Synthetic Recombinant Populations of Drosophila melanogaster
S. Macdonald, Anthony D. Long
2007Genetics67 citations Open access
Semantic Scholar
hairy: A quantitative trait locus for drosophila sensory bristle number.
C. Robin, R. F. Lyman, Anthony D. Long, C. Langley +1 more
2002Genetics67 citations
Semantic Scholar
Genetic Dissection of the Drosophila melanogaster Female Head Transcriptome Reveals Widespread Allelic Heterogeneity
Elizabeth G. King, Brian J. Sanderson, Casey L. McNeil, Anthony D. Long +1 more
2014PLoS Genetics62 citations Open access
Semantic Scholar
The genome of Peromyscus leucopus, natural host for Lyme disease and other emerging infections
Anthony D. Long, James G. Baldwin-Brown, Yuan Tao, Vanessa J. Cook +4 more
2019Science Advances59 citations Open access
Semantic Scholar
Fine-Mapping Nicotine Resistance Loci in Drosophila Using a Multiparent Advanced Generation Inter-Cross Population
T. Marriage, Elizabeth G. King, Anthony D. Long, S. Macdonald
2014Genetics53 citations Open access
Semantic Scholar
Generating phenotypic variation: prospects from “evo‐devo” research on Bicyclus anynana wing patterns
P. Beldade, P. Brakefield, Anthony D. Long
2005Evolution & Development49 citations
Semantic Scholar
The Beavis Effect in Next-Generation Mapping Panels in Drosophila melanogaster
Elizabeth G. King, Anthony D. Long
2017G3: Genes, Genomes, Genetics48 citations Open access
Semantic Scholar
Gene Expression Variation in Drosophila melanogaster Due to Rare Transposable Element Insertion Alleles of Large Effect
J. Cridland, Kevin R. Thornton, Anthony D. Long
2014Genetics48 citations Open access
Semantic Scholar
Identifying Loci Contributing to Natural Variation in Xenobiotic Resistance in Drosophila
Michael A. Najarro, J. Hackett, Brittny R. Smith, C. Highfill +3 more
2015PLoS Genetics46 citations Open access
Semantic Scholar
Genome-Wide Association Study of Extreme Longevity in Drosophila melanogaster
M. Burke, Elizabeth G. King, Parvin Shahrestani, M. Rose +1 more
2013Genome Biology and Evolution41 citations Open access
Semantic Scholar
The Effect of Polymorphisms in the Enhancer of split Gene Complex on Bristle Number Variation in a Large Wild-Caught Cohort of Drosophila melanogaster
S. Macdonald, T. Pastinen, Anthony D. Long
2005Genetics41 citations Open access
Semantic Scholar
No Evidence for an Association Between Common Nonsynonymous Polymorphisms in Delta and Bristle Number Variation in Natural and Laboratory Populations of Drosophila melanogaster
A. Genissel, T. Pastinen, A. Dowell, T. Mackay +1 more
2004Genetics37 citations
Semantic Scholar
A New Standard for Crustacean Genomes: The Highly Contiguous, Annotated Genome Assembly of the Clam Shrimp Eulimnadia texana Reveals HOX Gene Order and Identifies the Sex Chromosome
James G. Baldwin-Brown, S. Weeks, Anthony D. Long
2017bioRxiv36 citations Open access
Semantic Scholar
A low-cost open-source SNP genotyping platform for association mapping applications
S. Macdonald, T. Pastinen, A. Genissel, Theodore W. Cornforth +1 more
2005Genome Biology34 citations Open access
Semantic Scholar
A Model of Compound Heterozygous, Loss-of-Function Alleles Is Broadly Consistent with Observations from Complex-Disease GWAS Datasets
Jaleal S Sanjak, Anthony D. Long, Kevin R. Thornton
2016bioRxiv33 citations Open access
Semantic Scholar
How Repeatable Are Associations Between Polymorphisms in achaete–scute and Bristle Number Variation in Drosophila?
Jonathan D. Gruber, A. Genissel, S. Macdonald, Anthony D. Long
2007Genetics33 citations Open access
Semantic Scholar
The Genetic Architecture of Methotrexate Toxicity Is Similar in Drosophila melanogaster and Humans
Galina Kislukhin, Elizabeth G. King, Kelli N. Walters, S. Macdonald +1 more
2013G3: Genes, Genomes, Genetics30 citations Open access
Semantic Scholar
Changes in Gene Expression Following High‐Temperature Adaptation in Experimentally Evolved Populations of E. coli
Michelle M. Riehle, A. F. Bennett, Anthony D. Long
2005Physiological and Biochemical Zoology29 citations
Semantic Scholar
Two Synthetic 18-Way Outcrossed Populations of Diploid Budding Yeast with Utility for Complex Trait Dissection
R. Linder, A. Majumder, M. Chakraborty, Anthony D. Long
2020Genetics23 citations Open access
Semantic Scholar

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