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Yasuhiro Kumaki · SciRah

Researcher profile · Semantic Scholar

Yasuhiro Kumaki

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Yasuhiro Kumaki — researcher profile on SciRah

h-index: 17
Works: 116
Citations: 885

Most-cited papers

Interaction between tachyplesin I, an antimicrobial peptide derived from horseshoe crab, and lipopolysaccharide.
T. Kushibiki, M. Kamiya, T. Aizawa, Yasuhiro Kumaki +5 more
2014Biochimica et Biophysica Acta75 citations Open access
Semantic Scholar
Structure of the Antimicrobial Peptide Tachystatin A*
N. Fujitani, S. Kawabata, T. Osaki, Yasuhiro Kumaki +3 more
2002Journal of Biological Chemistry52 citations Open access
Semantic Scholar
Flexible structures and ligand interactions of tandem repeats consisting of proline, glycine, asparagine, serine, and/or threonine rich oligopeptides in proteins.
N. Matsushima, H. Yoshida, Yasuhiro Kumaki, M. Kamiya +3 more
2008Current protein and peptide science47 citations
Semantic Scholar
The solution structure of apocalmodulin from Saccharomyces cerevisiae implies a mechanism for its unique Ca2+ binding property.
H. Ishida, K. Nakashima, Yasuhiro Kumaki, M. Nakata +2 more
2002Biochemistry40 citations
Semantic Scholar
Absolute configuration of chlorosulfolipids from the chrysophyta Ochromonas danica.
Teppei Kawahara, Yasuhiro Kumaki, T. Kamada, T. Ishii +1 more
2009Journal of Organic Chemistry34 citations
Semantic Scholar
Structure and Activity of the Insect Cytokine Growth-blocking Peptide
T. Aizawa, Y. Hayakawa, A. Ohnishi, N. Fujitani +8 more
2001Journal of Biological Chemistry34 citations Open access
Semantic Scholar
Lipopolysaccharide‐bound structure of the antimicrobial peptide cecropin P1 determined by nuclear magnetic resonance spectroscopy
Mi-Hwa Baek, M. Kamiya, T. Kushibiki, Taichi Nakazumi +7 more
2016Journal of Peptide Science29 citations Open access
Semantic Scholar
Interaction of dopamine and acetylcholine with an amphiphilic resorcinarene receptor in aqueous micelle system.
M. Demura, Tsutomu Yoshida, T. Hirokawa, Yasuhiro Kumaki +4 more
2005Bioorganic & Medicinal Chemistry Letters24 citations
Semantic Scholar
Cordyceps militaris Fruit Body Extract Decreases Testosterone Catabolism and Testosterone-Stimulated Prostate Hypertrophy
K. Kusama, Mayuko Miyagawa, K. Ota, N. Kuwabara +8 more
2020Nutrients22 citations Open access
Semantic Scholar
A circular loop of the 16-residue repeating unit in ice nucleation protein.
Yasuhiro Kumaki, K. Kawano, K. Hikichi, Takeshi Matsumoto +1 more
2008Biochemical and Biophysical Research Communications - BBRC22 citations
Semantic Scholar
Design and Synthesis of Cyclic ADP-4-Thioribose as a Stable Equivalent of Cyclic ADP-Ribose, a Calcium Ion-Mobilizing Second Messenger
Takayoshi Tsuzuki, Natsumi Sakaguchi, Takashi Kudoh, S. Takano +14 more
2013Angewandte Chemie17 citations Open access
Semantic Scholar
Structure of the YSPTSPS repeat containing two SPXX motifs in the CTD of RNA polymerase II: NMR studies of cyclic model peptides reveal that the SPTS turn is more stable than SPSY in water.
Yasuhiro Kumaki, N. Matsushima, H. Yoshida, Katsutoshi Nitta +1 more
2001Biochimica et Biophysica Acta16 citations
Semantic Scholar
X‐ray crystallography and structural stability of digestive lysozyme from cow stomach
Y. Nonaka, Daisuke Akieda, T. Aizawa, N. Watanabe +6 more
2009The FEBS Journal15 citations Open access
Semantic Scholar
Stabilization of protein by replacement of a fluctuating loop: structural analysis of a chimera of bovine alpha-lactalbumin and equine lysozyme.
M. Tada, Y. Kobashigawa, M. Mizuguchi, K. Miura +5 more
2002Biochemistry12 citations
Semantic Scholar
Efficient production of a correctly folded mouse α-defensin, cryptdin-4, by refolding during inclusion body solubilization.
S. Tomisawa, Yuji Sato, M. Kamiya, Yasuhiro Kumaki +6 more
2015Protein Expression and Purification11 citations Open access
Semantic Scholar
Overexpression of an antimicrobial peptide derived from C. elegans using an aggregation-prone protein coexpression system
S. Tomisawa, E. Hojo, Y. Umetsu, S. Ohki +9 more
2013AMB Express11 citations Open access
Semantic Scholar
STPR, a 23-amino acid tandem repeat domain, found in the human function-unknown protein ZNF821.
Y. Nonaka, Hideki Muto, T. Aizawa, E. Okabe +12 more
2010Biochemistry10 citations
Semantic Scholar
Structural approach to a novel tandem repeat DNA-binding domain, STPR, by CD and NMR.
Shin Saito, T. Aizawa, K. Kawaguchi, T. Yamaki +7 more
2007Biochemistry9 citations
Semantic Scholar
Structural properties of the DNA‐bound form of a novel tandem repeat DNA‐binding domain, STPR
Shin Saito, T. Yokoyama, T. Aizawa, K. Kawaguchi +9 more
2008Proteins: Structure, Function, and Bioinformatics8 citations
Semantic Scholar
A Basic Study of the Effects of Mulberry Leaf Administration to Healthy C57BL/6 Mice on Gut Microbiota and Metabolites
Li Gan, Yuga Inamura, Yu Shimizu, Y. Yokoi +9 more
2023Metabolites7 citations Open access
Semantic Scholar
Three-Dimensional Structure of the Antimicrobial Peptide Cecropin P1 in Dodecylphosphocholine Micelles and the Role of the C-Terminal Residues
Hao Gu, Takasumi Kato, Hiroyuki Kumeta, Yasuhiro Kumaki +6 more
2022ACS Omega7 citations Open access
Semantic Scholar
Side chain-side chain interactions of arginine with tyrosine and aspartic acid in Arg/Gly/Tyr-rich domains within plant glycine-rich RNA binding proteins.
Yasuhiro Kumaki, K. Nitta, K. Hikichi, Takeshi Matsumoto +1 more
2004Journal of Biochemistry (Tokyo)7 citations
Semantic Scholar
Structural Analysis of an Antibacterial Peptide Derived from a Nematode
T. Aizawa, H. Hoshino, N. Fujitani, N. Koganesawa +7 more
20017 citations
Semantic Scholar
An oxidative metabolic pathway of 4-deoxy-L-erythro-5-hexoseulose uronic acid (DEHU) from alginate in an alginate-assimilating bacterium
R. Nishiyama, T. Ojima, Yuki Ohnishi, Yasuhiro Kumaki +2 more
2021Communications Biology6 citations Open access
Semantic Scholar
Effects of a helix substitution on the folding mechanism of bovine α‐lactalbumin
M. Mizuguchi, Y. Kobashigawa, Yasuhiro Kumaki, M. Demura +2 more
20026 citations
Semantic Scholar
Structure and Activity of the Insect Cytokine Growth-blocking Peptide ESSENTIAL REGIONS FOR MITOGENIC AND HEMOCYTE-STIMULATING ACTIVITIES ARE SEPARATE*
T. Aizawa, Y. Hayakawa, A. Ohnishi, N. Fujitani +8 more
20016 citations
Semantic Scholar
Synthesis of 8-Substituted Analogues of Cyclic ADP-4-Thioribose and Their Unexpected Identification as Ca2+-Mobilizing Full Agonists.
S. Takano, Takayoshi Tsuzuki, T. Murayama, T. Kameda +6 more
2017Journal of Medicinal Chemistry5 citations Open access
Semantic Scholar
Application of Benchtop NMR for Metabolomics Study Using Feces of Mice with DSS-Induced Colitis
Zihao Song, Yuki Ohnishi, S. Osada, Li Gan +9 more
2023Metabolites4 citations Open access
Semantic Scholar
Structure–activity relationship of a novel pentapeptide with cancer cell growth‐inhibitory activity
M. Kamiya, Keisuke Oyauchi, Yoshinori Sato, T. Yokoyama +8 more
2010Journal of Peptide Science4 citations
Semantic Scholar
C-terminal Elongation of Growth-blocking Peptide Enhances Its Biological Activity and Micelle Binding Affinity*
Y. Umetsu, T. Aizawa, K. Muto, Hiroko Yamamoto +6 more
2009Journal of Biological Chemistry4 citations Open access
Semantic Scholar
Copper binding to plant ozone-inducible proteins (OI2-2 and OI14-3).
M. Kamiya, Yasuhiro Kumaki, K. Nitta, T. Ueno +5 more
2004Biochemical and Biophysical Research Communications - BBRC4 citations
Semantic Scholar
Carbohydrate recognition of gramicidin S analogues in aqueous medium.
T. Niidome, Hiroto Murakami, M. Kawazoe, T. Hatakeyama +6 more
2001Bioorganic & Medicinal Chemistry Letters4 citations
Semantic Scholar
Metabolomics of Duodenal Juice for Biliary Tract Cancer Diagnosis
Kazuma Kishi, M. Kuwatani, Yuki Ohnishi, Yasuhiro Kumaki +11 more
2023Cancers3 citations Open access
Semantic Scholar
Enzymatic characterization of a mannuronan C5-epimerase from the subtropical brown alga Cladosiphon okamuranus
Miu Sakagami, Yuki Ohnishi, Yasuhiro Kumaki, Tomoyasu Aizawa +1 more
2023Fisheries Science3 citations
Semantic Scholar
Recombinant Production of Isotope-labeled Human α-Defensin 5 via Calmodulin Fusion and Insights into Its Expression Enhancement.
Shaonan Yan, Hao Gu, Mitsuki Shibagaki, Jeremia Oktavian Chrisnanto +9 more
2025Peptides2 citations Open access
Semantic Scholar
Letter to the Editor: 1H, 15N and 13C resonance assignments of yeast Saccharomyces cerevisiaecalmodulin in the Ca2+-free state
H. Ishida, K. Nakashima, Yasuhiro Kumaki, M. Nakata +2 more
2002Journal of Biomolecular NMR2 citations
Semantic Scholar
Benchtop NMR-based lactose quantification in human milk: correction of oligosaccharide interference and comparison with high-field NMR
Jiaxi Jiang, Zhiyan Hu, J. Abe, Thanawat Thumrongtaradol +15 more
2026Microchemical journal (Print)1 citations Open access
Semantic Scholar
Structural and Stability Analysis of GRP Family Allergens Pru p 7 and Cry j 7, Which Cause Pollen and Food Allergy Syndrome
Jing-chen Zheng, Hiroyuki Kumeta, Yasuhiro Kumaki, T. Iizuka +3 more
2025Biomolecules1 citations
Semantic Scholar
Studies on the Quality Control of Fermented Brown Rice and Rice Bran with Aspergillus oryzae by Metabolome Analysis Using 1H-NMR
Y. Horie, H. Nemoto, J. Fujita, S. Ikegawa +5 more
2019Nippon Shokuhin Kagaku Kogaku kaishi1 citations Open access
Semantic Scholar
SOLUTION STRUCTURE OF THE APO N-TERMINAL DOMAIN OF YEAST CALMODULIN
H. Ishida, Kazuhisa Takahashi, K. Nakashima, Yasuhiro Kumaki +3 more
20031 citations
Semantic Scholar
Effects of a helix substitution on the folding mechanism of bovine alpha-lactalbumin.
M. Mizuguchi, Y. Kobashigawa, Yasuhiro Kumaki, M. Demura +2 more
2002Proteins: Structure, Function, and Bioinformatics1 citations
Semantic Scholar
Calmodulin-tagging prevents aggregation and facilitates the proteolytic release of the recombinant human cathelicidin LL-37 by accommodating its hydrophobic regions.
Mitsuki Shibagaki, Jeremia Oktavian Chrisnanto, Dessalegn Abeje Tefera, Hiroyuki Kumeta +8 more
2026International Journal of Biological Macromolecules0 citations
Semantic Scholar
Machine Learning-Enabled Quantification of Fucosylated Human Milk Oligosaccharides in Human Breast Milk by Benchtop 1H NMR Spectroscopy.
Zhiyan Hu, Jia-Xi Jiang, J. Abe, Thanawat Thumrongtaradol +15 more
2026Journal of Agricultural and Food Chemistry0 citations
Semantic Scholar
Solution structure of cecropin P1 with LPS
Mi-Hwa Baek, M. Kamiya, T. Kushibiki, Taichi Nakazumi +7 more
20160 citations
Semantic Scholar
1999 XIII International Biophysics Congress 19-24 September 1999 New Delhi Abstracts Suppl
N. Manoj, V. Srinivas, A. Surolia, M. Vijayan +496 more
20160 citations
Semantic Scholar
3P074 Novel screening method for detection system of pathogens using antimicrobial peptides(01D. Protein: Function,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))
Tatsuyuki Koshiyama, S. Tomisawa, T. Kikukawa, Yasuhiro Kumaki +3 more
20140 citations Open access
Semantic Scholar
Tachyplesin I in water
T. Kushibiki, M. Kamiya, T. Aizawa, Yasuhiro Kumaki +5 more
20140 citations
Semantic Scholar
The Biophysical Society of Japan General Incorporated Association NII-Electronic Library Service
heBiophysical Ociety, Yusuke Tanakai, Akikdzu MuTakami, Miyuki Nibhimura +9 more
20140 citations
Semantic Scholar
1P077 NMR and docking structure of antimicrobial peptide complexed with lipopolysaccharide(01D. Protein : Function,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))
T. Kushibiki, M. Kamiya, T. Aizawa, Yasuhiro Kumaki +5 more
20140 citations Open access
Semantic Scholar
The Biophysical Society of Japan General Incorporated Association NII-Electronic Library Service
heBiophysical Ociety, Yusuke Tanakai, Akikdzu MuTakami, Miyuki Nibhimura +9 more
20140 citations
Semantic Scholar

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K. Kawano×23
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T. Aizawa×22
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M. Kamiya×16
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Tomoyasu Aizawa×9

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Hiroyuki Kumeta×7

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T. Kushibiki — researcher profile on SciRah