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M. Wilkins · SciRah

Researcher profile · Semantic Scholar

M. Wilkins

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M. Wilkins — researcher profile on SciRah

h-index: 55
Works: 255
Citations: 25K

Most-cited papers

Specific Bacteria and Metabolites Associated With Response to Fecal Microbiota Transplantation in Patients With Ulcerative Colitis.
S. Paramsothy, S. Nielsen, M. Kamm, N. Deshpande +15 more
2019Gastroenterology460 citations Open access
Semantic Scholar
Adaptation and conservation insights from the koala genome
Rebecca N. Johnson, D. O'Meally, Zhiliang Chen, G. Etherington +50 more
2018Nature Genetics211 citations Open access
Semantic Scholar
A high-stringency blueprint of the human proteome
S. Adhikari, E. Nice, E. Deutsch, L. Lane +42 more
2020Nature Communications170 citations Open access
Semantic Scholar
The RNA Atlas expands the catalog of human non-coding RNAs
L. Lorenzi, Hua-Sheng Chiu, Francisco Avila Cobos, Stephen Gross +32 more
2021Nature Biotechnology147 citations Open access
Semantic Scholar
Signatures within the esophageal microbiome are associated with host genetics, age, and disease
N. Deshpande, S. Riordan, N. Castaño-Rodríguez, M. Wilkins +1 more
2018Microbiome136 citations Open access
Semantic Scholar
Metabolite-based dietary supplementation in human type 1 diabetes is associated with microbiota and immune modulation
K. Bell, S. Saad, B. Tillett, H. McGuire +15 more
2021Microbiome121 citations Open access
Semantic Scholar
Integrative Genomics Identifies the Molecular Basis of Resistance to Azacitidine Therapy in Myelodysplastic Syndromes.
Ashwin Unnikrishnan, E. Papaemmanuil, D. Beck, N. Deshpande +36 more
2017Cell Reports113 citations Open access
Semantic Scholar
Histone H3 Mutations: An Updated View of Their Role in Chromatin Deregulation and Cancer
B. Lowe, Lily Maxham, Joshua J. Hamey, M. Wilkins +1 more
2019Cancers109 citations Open access
Semantic Scholar
Synergy and antagonism between iron chelators and antifungal drugs in Cryptococcus.
Yu-Wen Lai, Leona Campbell, M. Wilkins, C. Pang +2 more
2016International Journal of Antimicrobial Agents73 citations Open access
Semantic Scholar
Respiratory viral co-infections among SARS-CoV-2 cases confirmed by virome capture sequencing
K. W. Kim, I. Deveson, C. Pang, M. Yeang +14 more
2020Scientific Reports72 citations Open access
Semantic Scholar
RNA-Seq analysis and comparison of corneal epithelium in keratoconus and myopia patients
J. You, Susan M. Corley, L. Wen, C. Hodge +4 more
2018Scientific Reports72 citations Open access
Semantic Scholar
Draft genome assembly of the invasive cane toad, Rhinella marina
Richard J. Edwards, D. E. Tuipulotu, Timothy G. Amos, D. O'Meally +11 more
2018GigaScience70 citations Open access
Semantic Scholar
Cross-linking mass spectrometry discovers, evaluates, and corroborates structures and protein–protein interactions in the human cell
Tara K. Bartolec, Xabier Vázquez-Campos, Alexander Norman, Clement Luong +5 more
2023Proceedings of the National Academy of Sciences of the United States of America65 citations Open access
Semantic Scholar
Methylation of Elongation Factor 1A: Where, Who, and Why?
Joshua J. Hamey, M. Wilkins
2018TIBS -Trends in Biochemical Sciences. Regular ed63 citations Open access
Semantic Scholar
Integrative omics identifies conserved and pathogen-specific responses of sepsis-causing bacteria
A. Mu, William P. Klare, S. Baines, C. N. Ignatius Pang +87 more
2023Nature Communications60 citations Open access
Semantic Scholar
A new link between transcriptional initiation and pre-mRNA splicing: The RNA binding histone variant H2A.B
T. Soboleva, B. Parker, Maxim Nekrasov, Gene Hart-Smith +5 more
2017PLoS Genetics60 citations Open access
Semantic Scholar
Large Scale Mass Spectrometry-based Identifications of Enzyme-mediated Protein Methylation Are Subject to High False Discovery Rates*
Gene Hart-Smith, Daniel Yagoub, A. Tay, Russell Pickford +1 more
2016Molecular & Cellular Proteomics60 citations Open access
Semantic Scholar
Differential Ion Mobility-Mass Spectrometry for Detailed Analysis of the Proteome.
Daniel L. Winter, M. Wilkins, W. Donald
2019Trends in Biotechnology55 citations Open access
Semantic Scholar
Toward Increased Reliability, Transparency, and Accessibility in Cross-linking Mass Spectrometry.
A. Leitner, A. Bonvin, C. Borchers, R. Chalkley +32 more
2020Structure54 citations Open access
Semantic Scholar
QuantSeq. 3′ Sequencing combined with Salmon provides a fast, reliable approach for high throughput RNA expression analysis
Susan M. Corley, N. Troy, A. Bosco, M. Wilkins
2019Scientific Reports53 citations Open access
Semantic Scholar
Distinct Gut Virome Profile of Pregnant Women With Type 1 Diabetes in the ENDIA Study
Ki Wook Kim, D. Allen, T. Briese, J. Couper +25 more
2019Open Forum Infectious Diseases46 citations Open access
Semantic Scholar
Higher abundance of enterovirus A species in the gut of children with islet autoimmunity
K. W. Kim, Jessica L. Horton, C. Pang, K. Jain +10 more
2019Scientific Reports46 citations Open access
Semantic Scholar
METTL21B Is a Novel Human Lysine Methyltransferase of Translation Elongation Factor 1A: Discovery by CRISPR/Cas9 Knockout*
Joshua J. Hamey, B. Wienert, K. Quinlan, M. Wilkins
2017Molecular & Cellular Proteomics46 citations Open access
Semantic Scholar
Long-read genome sequence assembly provides insight into ongoing retroviral invasion of the koala germline
M. Hobbs, Andrew G. King, Ryan Salinas, Zhiliang Chen +6 more
2017Scientific Reports45 citations Open access
Semantic Scholar
RNA Splicing Alterations Induce a Cellular Stress Response Associated with Poor Prognosis in Acute Myeloid Leukemia
Govardhan Anande, N. Deshpande, S. Mareschal, A. Batcha +7 more
2020Clinical Cancer Research37 citations Open access
Semantic Scholar
RNase III-CLASH of multi-drug resistant Staphylococcus aureus reveals a regulatory mRNA 3′UTR required for intermediate vancomycin resistance
Daniel G. Mediati, Julia L. Wong, Wei Gao, S. McKellar +11 more
2022Nature Communications34 citations Open access
Semantic Scholar
STAT3 regulates cytotoxicity of human CD57+ CD4+ T cells in blood and lymphoid follicles
J. Alshekaili, R. Chand, Cindy Eunhee Lee, Susan M. Corley +12 more
2018Scientific Reports34 citations Open access
Semantic Scholar
Differentially expressed genes from RNA-Seq and functional enrichment results are affected by the choice of single-end versus paired-end reads and stranded versus non-stranded protocols
Susan M. Corley, K. MacKenzie, A. Beverdam, L. Roddam +1 more
2017BMC Genomics34 citations Open access
Semantic Scholar
Pyomelanin produced by Vibrio cholerae confers resistance to predation by Acanthamoeba castellanii
Parisa Noorian, Jie Hu, Zhiliang Chen, S. Kjelleberg +3 more
2017FEMS Microbiology Ecology30 citations Open access
Semantic Scholar
Combination efficacy of ruxolitinib with standard-of-care drugs in CRLF2-rearranged Ph-like acute lymphoblastic leukemia
Julia W. Böhm, K. C. Sia, Connor D. Jones, K. Evans +15 more
2021Leukemia29 citations Open access
Semantic Scholar
Plau and Tgfbr3 are YAP-regulated genes that promote keratinocyte proliferation
Susan M. Corley, Veronica Mendoza-Reinoso, N. Giles, E. Singer +3 more
2018Cell Death and Disease29 citations Open access
Semantic Scholar
MT-MAMS: Protein Methyltransferase Motif Analysis by Mass Spectrometry.
Joshua J. Hamey, Ryan J. Separovich, M. Wilkins
2018Journal of Proteome Research27 citations Open access
Semantic Scholar
Methylation of a CGATA element inhibits binding and regulation by GATA-1
Lu Yang, Zhiliang Chen, Elizabeth S. Stout, Fabien Delerue +4 more
2020Nature Communications24 citations Open access
Semantic Scholar
Crosstalk of phosphorylation and arginine methylation in disordered SRGG repeats of S. cerevisiae fibrillarin and its association with nucleolar localisation.
Daniela-Lee Smith, Melissa A. Erce, Yu-Wen Lai, F. Tomasetig +3 more
2019Journal of Molecular Biology24 citations Open access
Semantic Scholar
Little evidence of adaptation potential to ocean acidification in sea urchins living in “Future Ocean” conditions at a CO2 vent
S. Uthicke, N. Deshpande, M. Liddy, F. Patel +2 more
2019Ecology and Evolution24 citations Open access
Semantic Scholar
Molecular Phenotyping of Telomerized Human Bone Marrow Skeletal Stem Cells Reveals a Genetic Program of Enhanced Proliferation and Maintenance of Differentiation Responses
Natalie A. Twine, L. Harkness, J. Adjaye, A. Aldahmash +2 more
2018JBMR Plus24 citations Open access
Semantic Scholar
Controlling the Controllers: Regulation of Histone Methylation by Phosphosignalling.
Ryan J. Separovich, C. Pang, M. Wilkins
2020TIBS -Trends in Biochemical Sciences. Regular ed22 citations
Semantic Scholar
Crosslinking mass spectrometry analysis of the yeast nucleus reveals extensive protein-protein interactions not detected by systematic two-hybrid or affinity purification-mass spectrometry.
Tara K. Bartolec, Daniela-Lee Smith, C. Pang, You D. Xu +2 more
2019Analytical Chemistry22 citations Open access
Semantic Scholar
Multi-omics of the esophageal microenvironment identifies signatures associated with progression of Barrett’s esophagus
N. Deshpande, S. Riordan, Claire J. Gorman, S. Nielsen +9 more
2021Genome Medicine21 citations Open access
Semantic Scholar
Systems-based approaches enable identification of gene targets which improve the flavour profile of low-ethanol wine yeast strains.
C. Varela, S. Schmidt, A. Borneman, C. Pang +14 more
2018Metabolic Engineering21 citations Open access
Semantic Scholar
Transcriptome and network analyses in Saccharomyces cerevisiae reveal that amphotericin B and lactoferrin synergy disrupt metal homeostasis and stress response
C. Pang, Yu-Wen Lai, Leona Campbell, S. Chen +2 more
2017Scientific Reports21 citations Open access
Semantic Scholar
Ready, SET, Go: Post-translational regulation of the histone lysine methylation network in budding yeast
Ryan J. Separovich, M. Wilkins
2021Journal of Biological Chemistry20 citations Open access
Semantic Scholar
Improved Quantitative Plant Proteomics via the Combination of Targeted and Untargeted Data Acquisition
Gene Hart-Smith, R. S. Reis, P. Waterhouse, M. Wilkins
2017Frontiers in Plant Science20 citations Open access
Semantic Scholar
Systematic investigation of PRMT6 substrate recognition reveals broad specificity with a preference for an RG motif or basic and bulky residues
Joshua J. Hamey, S. Rakow, C. Bouchard, Johanna Senst +4 more
2021The FEBS Journal19 citations
Semantic Scholar
Characterization of Protein Methyltransferases Rkm1, Rkm4, Efm4, Efm7, Set5 and Hmt1 Reveals Extensive Post-Translational Modification.
Daniel L. Winter, Gene Hart-Smith, M. Wilkins
2018Journal of Molecular Biology19 citations Open access
Semantic Scholar
PTMOracle: A Cytoscape App for Covisualizing and Coanalyzing Post-Translational Modifications in Protein Interaction Networks.
A. Tay, C. Pang, Daniel L. Winter, M. Wilkins
2017Journal of Proteome Research17 citations
Semantic Scholar
Post-translational modification analysis of Saccharomyces cerevisiae histone methylation enzymes reveals phosphorylation sites of regulatory potential
Ryan J. Separovich, M. Wong, Tyler R. Chapman, Eve Slavich +2 more
2020Journal of Biological Chemistry16 citations Open access
Semantic Scholar
Characterization of the Interaction between Arginine Methyltransferase Hmt1 and Its Substrate Npl3: Use of Multiple Cross-Linkers, Mass Spectrometric Approaches, and Software Platforms.
Daniela-Lee Smith, Michael Götze, Tara K. Bartolec, Gene Hart-Smith +1 more
2018Analytical Chemistry16 citations Open access
Semantic Scholar
Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia
M. Schneider, Pip Griffin, S. Tyagi, Madison Flannery +14 more
2017Briefings Bioinform.16 citations Open access
Semantic Scholar
Transcription factor ZNF25 is associated with osteoblast differentiation of human skeletal stem cells
Natalie A. Twine, L. Harkness, M. Kassem, M. Wilkins
2016BMC Genomics16 citations Open access
Semantic Scholar

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