Researcher profile · Semantic Scholar

Le-Shin Wu

h-index: 11
Works: 41
Citations: 1,147

Most-cited papers

Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies
D. Neale, J. Wegrzyn, K. Stevens, A. Zimin +33 more
2014Genome Biology484 citations Open access
Semantic Scholar
Unique Features of the Loblolly Pine (Pinus taeda L.) Megagenome Revealed Through Sequence Annotation
J. Wegrzyn, J. Liechty, Kristian Stevens, Le-Shin Wu +18 more
2014Genetics207 citations Open access
Semantic Scholar
De Novo Assembly of a Transcriptome for Calanus finmarchicus (Crustacea, Copepoda) – The Dominant Zooplankter of the North Atlantic Ocean
P. Lenz, V. Roncalli, R. Hassett, Le-Shin Wu +3 more
2014PLoS ONE106 citations Open access
Semantic Scholar
Trinity RNA-Seq assembler performance optimization
R. Henschel, M. Lieber, Le-Shin Wu, Phil Nista +2 more
2012Extreme Science and Engineering Discovery Environment76 citations
Semantic Scholar
Peptidergic signaling in Calanus finmarchicus (Crustacea, Copepoda): in silico identification of putative peptide hormones and their receptors using a de novo assembled transcriptome.
A. Christie, V. Roncalli, Le-Shin Wu, C. Ganote +2 more
2013General and Comparative Endocrinology72 citations
Semantic Scholar
Emerging semantic communities in peer web search
Ruj Akavipat, Le-Shin Wu, F. Menczer, Ana Gabriela Maguitman
2006Information Retrieval In Peer-To-Peer Networks44 citations
Semantic Scholar
A Consensus Genetic Map for Pinus taeda and Pinus elliottii and Extent of Linkage Disequilibrium in Two Genotype-Phenotype Discovery Populations of Pinus taeda
J. Westbrook, Vikram E. Chhatre, Le-Shin Wu, S. Chamala +10 more
2015G3: Genes, Genomes, Genetics35 citations Open access
Semantic Scholar
6S: Distributing Crawling and Searching Across Web Peers
Le-Shin Wu, Ruj Akavipat, F. Menczer
2005Web Technologies, Applications, and Services25 citations
Semantic Scholar
Small world peer networks in distributed web search
Ruj Akavipat, Le-Shin Wu, F. Menczer
2004WWW Alt. '0419 citations
Semantic Scholar
Development of single nucleotide polymorphism (SNP) markers from the mango (Mangifera indica) transcriptome for mapping and estimation of genetic diversity
D. Kuhn, N. Dillon, D. Innes, Le-Shin Wu +1 more
201617 citations
Semantic Scholar
Sixearch.org 2.0 peer application for collaborative web search
N. Lele, Le-Shin Wu, Ruj Akavipat, F. Menczer
2009ACM Conference on Hypertext & Social Media12 citations
Semantic Scholar
Adaptive Peer-to-Peer Social Networks for Distributed Content-Based Web Search
Le-Shin Wu, Ruj Akavipat, Ana Gabriela Maguitman, F. Menczer
200811 citations
Semantic Scholar
Adaptive query routing in peer web search
Le-Shin Wu, Ruj Akavipat, F. Menczer
2005The Web Conference9 citations
Semantic Scholar
National Center for Genome Analysis support leverages XSEDE to support life science research
Richard D. LeDuc, T. Doak, Le-Shin Wu, P. Blood +2 more
2013Extreme Science and Engineering Discovery Environment7 citations Open access
Semantic Scholar
Diverse peer selection in collaborative web search
Le-Shin Wu, F. Menczer
2009ACM Symposium on Applied Computing6 citations
Semantic Scholar
Intelligent Peer Networks for Collaborative Web Search
F. Menczer, Le-Shin Wu, Ruj Akavipat
2008The AI Magazine6 citations Open access
Semantic Scholar
Galaxy based BLAST submission to distributed national high throughput computing resources
S. Hayashi, S. Gesing, R. Quick, S. Teige +3 more
20133 citations
Semantic Scholar
Decoding the massive genome of loblolly pine using haploid DNA and novel assembly strategies
D. Neale, J. Wegrzyn, Kristian Stevens, A. Zimin +33 more
2014Genome Biology2 citations Open access
Semantic Scholar
An annotated consensus genetic map for Pinus taeda L. and extent of linkage disequilibrium in three genotype-phenotype discovery populations
J. Westbrook, Vikram E. Chhatre, Le-Shin Wu, S. Chamala +10 more
2014bioRxiv2 citations Open access
Semantic Scholar
Genome Size Estimation and Full-length Transcriptome of Sphingonotus tsinlingensis: Genetic Background for the Drought-Adapted Grasshopper
Lu Zhao, Hang Wang, Le-Shin Wu, Kuo Sun +2 more
2021bioRxiv1 citations Open access
Semantic Scholar
Transcriptome Assembly of Asian Buffalo Leech Hirudinaria Manillensis and An Accurate Identification of Genes Involved in Anticoagulant Biosynthesis
Chun-Yan Fan, N. N. Abbood, Junhua Lu, Le-Shin Wu +3 more
20201 citations Open access
Semantic Scholar
Galaxy for Data Provenance
C. Ganote, Le-Shin Wu, T. Doak
20141 citations
Semantic Scholar
Using Prior Knowledge to Improve Scoring in High-Throughput Top-Down Proteomics Experiments
Richard D. LeDuc, Le-Shin Wu
20131 citations
Semantic Scholar
National Center for Genome Analysis Support (Poster)
T. Doak, Le-Shin Wu, C. Stewart, R. Henschel +1 more
2012IUScholarWorks (Indiana University)1 citations Open access
Semantic Scholar
Cyberinfrastructure resources enabling creation of the loblolly pine reference transcriptome
Le-Shin Wu, C. Ganote, T. Doak, William K. Barnett +2 more
2015Extreme Science and Engineering Discovery Environment0 citations Open access
Semantic Scholar
Introduction to Galaxy 2015
C. Ganote, Le-Shin Wu, T. Doak
2015IUScholarWorks (Indiana University)0 citations Open access
Semantic Scholar
Automating work in Galaxy
C. Ganote, Le-Shin Wu, T. Doak
20150 citations
Semantic Scholar
Introduction to Galaxy 2015
C. Ganote, Le-Shin Wu, T. Doak
20150 citations
Semantic Scholar
A Comparison of Transcript Discovery with Different d e novo Assembly Software Tools
Le-Shin Wu
20150 citations
Semantic Scholar
ACI-REF Mission: User Sensitivity 101
C. Ganote, Le-Shin Wu, T. Doak
20150 citations
Semantic Scholar
The National Center for Genomic Analysis Support: creating a national cyberinfrastructure environment for genomics researchers.
William K. Barnett, T. Doak, Le-Shin Wu, C. Ganote
20150 citations
Semantic Scholar
Introduction to genomics software use on high performance computing systems
Le-Shin Wu, C. Ganote
20140 citations
Semantic Scholar
RNA-Seq Demo on Galaxy
C. Ganote, Le-Shin Wu, T. Doak
20140 citations
Semantic Scholar
Computing challenges in working with genomics-scale data
Le-Shin Wu, C. Ganote
20140 citations
Semantic Scholar
Quality Control and Assessment of RNA-Seq Data
C. Ganote, R. Podicheti, Le-Shin Wu, T. Doak
20140 citations
Semantic Scholar
Moving Large Data to Galaxy
C. Ganote, Le-Shin Wu, T. Doak
20140 citations
Semantic Scholar
Galaxy based BLAST submission to Open Science Grid resources
S. Hayashi, S. Gesing, R. Quick, S. Teige +3 more
20140 citations Open access
Semantic Scholar
The National Center for Genome Analysis and Support
C. Ganote, Le-Shin Wu, T. Doak, William K. Barnett
20130 citations
Semantic Scholar
The National Center for Genome Analysis Support (Poster)
T. Doak, Richard D. LeDuc, Le-Shin Wu, C. Stewart +2 more
20120 citations
Semantic Scholar
A Hypothesis Testing Approach for Fluorescent Blob Identification
Le-Shin Wu, Sidney L. Shaw
2010International Conference on Pattern Recognition0 citations
Semantic Scholar
Adaptive peer networks for distributed web search
F. Menczer, Le-Shin Wu
20090 citations
Semantic Scholar

Ruj Akavipat

×7

William K. Barnett×5

Richard D. LeDuc×4

J. Wegrzyn×3

A. Zimin×3

D. Puiu×3

M. Crepeau×3

J. Liechty×3