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Yurie Watanabe · SciRah

Researcher profile · Semantic Scholar

Yurie Watanabe

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Yurie Watanabe — researcher profile on SciRah

h-index: 13
Works: 35
Citations: 574

Most-cited papers

Effect of tiotropium bromide on airway inflammation and remodelling in a mouse model of asthma
Sei Ohta, Naruhito Oda, T. Yokoe, A. Tanaka +8 more
2010Clinical and Experimental Allergy145 citations
Semantic Scholar
Susceptibility to cytosine arabinoside (Ara-C)-induced cytotoxicity in human leukemia cell lines.
Syu-ichi Kanno, Ayako Higurashi, Yurie Watanabe, Ai Shouji +2 more
2004Toxicology Letters47 citations
Semantic Scholar
A docking model of dapsone bound to HLA-B*13:01 explains the risk of dapsone hypersensitivity syndrome.
Hideaki Watanabe, Yurie Watanabe, Yasuya Tashiro, T. Mushiroda +7 more
2017Journal of dermatological science (Amsterdam)39 citations Open access
Semantic Scholar
Synthesis of Potent and Selective Inhibitors of Aldo-Keto Reductase 1B10 and Their Efficacy against Proliferation, Metastasis, and Cisplatin Resistance of Lung Cancer Cells.
S. Endo, Shuang Xia, Miho Suyama, Yoshifumi Morikawa +13 more
2017Journal of Medicinal Chemistry38 citations Open access
Semantic Scholar
Molecular Dynamics Simulations to Investigate the Influences of Amino Acid Mutations on Protein Three-Dimensional Structures of Cytochrome P450 2D6.1, 2, 10, 14A, 51, and 62
S. Fukuyoshi, Masaharu Kometani, Yurie Watanabe, M. Hiratsuka +5 more
2016PLoS ONE32 citations Open access
Semantic Scholar
Evaluation of Influence of Single Nucleotide Polymorphisms in Cytochrome P450 2B6 on Substrate Recognition Using Computational Docking and Molecular Dynamics Simulation
Kana Kobayashi, O. Takahashi, M. Hiratsuka, N. Yamaotsu +3 more
2014PLoS ONE32 citations Open access
Semantic Scholar
Design and Synthesis of Potent and Highly Selective Orexin 1 Receptor Antagonists with a Morphinan Skeleton and Their Pharmacologies.
H. Nagase, Naoshi Yamamoto, Masahiro Yata, Sayaka Ohrui +12 more
2017Journal of Medicinal Chemistry31 citations Open access
Semantic Scholar
In Silico Screening Identified Novel Small-molecule Antagonists of PAC1 Receptor
Ichiro Takasaki, Ai Watanabe, Masafumi Yokai, Yurie Watanabe +8 more
2018Journal of Pharmacology and Experimental Therapeutics29 citations Open access
Semantic Scholar
Investigation of substrate recognition for cytochrome P450 1A2 mediated by water molecules using docking and molecular dynamics simulations.
Yurie Watanabe, S. Fukuyoshi, K. Kato, M. Hiratsuka +4 more
2017Journal of Molecular Graphics and Modelling19 citations
Semantic Scholar
Prediction of three-dimensional structures and structural flexibilities of wild-type and mutant cytochrome P450 1A2 using molecular dynamics simulations.
Yurie Watanabe, S. Fukuyoshi, M. Hiratsuka, N. Yamaotsu +3 more
2016Journal of Molecular Graphics and Modelling17 citations
Semantic Scholar
A molecular interaction field describing nonconventional intermolecular interactions and its application to protein-ligand interaction prediction.
Daichi Hayakawa, Nahoko Sawada, Yurie Watanabe, H. Gouda
2019Journal of Molecular Graphics and Modelling16 citations Open access
Semantic Scholar
Design and synthesis of pyrido[2,3-d]pyrimidine derivatives for a novel PAC1 receptor antagonist.
Ichiro Takasaki, Ai Watanabe, Takuya Okada, Daisuke Kanayama +10 more
2022European journal of medicinal chemistry14 citations Open access
Semantic Scholar
Triethylated chromones with substituted naphthalenes as tubulin inhibitors
Kyoko Nakagawa-Goto, Yukako Taniguchi, Yurie Watanabe, A. Oda +4 more
2016Bioorganic & Medicinal Chemistry13 citations Open access
Semantic Scholar
Essential structure of orexin 1 receptor antagonist YNT-707, Part I: Role of the 4,5-epoxy ring for binding with orexin 1 receptor.
Naoshi Yamamoto, Sayaka Ohrui, T. Okada, Masahiro Yata +11 more
2017Bioorganic & Medicinal Chemistry Letters11 citations Open access
Semantic Scholar
Predicting the structures of complexes between phosphoinositide 3-kinase (PI3K) and romidepsin-related compounds for the drug design of PI3K/histone deacetylase dual inhibitors using computational docking and the ligand-based drug design approach.
A. Oda, K. Saijo, C. Ishioka, Koichi Narita +4 more
2014Journal of Molecular Graphics and Modelling11 citations
Semantic Scholar
Fragment-based discovery of the first nonpeptidyl inhibitor of an S46 family peptidase
Y. Sakamoto, Yoshiyuki Suzuki, A. Nakamura, Yurie Watanabe +17 more
2019Scientific Reports10 citations Open access
Semantic Scholar
Essential structure of orexin 1 receptor antagonist YNT-707, Part II: Drastic effect of the 14-hydroxy group on the orexin 1 receptor antagonistic activity.
Sayaka Ohrui, Naoshi Yamamoto, Tsuyoshi Saitoh, N. Kutsumura +9 more
2017Bioorganic & Medicinal Chemistry Letters10 citations Open access
Semantic Scholar
Design, synthesis, and evaluation of novel inhibitors for wild-type human serine racemase.
Satoyuki Takahara, Kiyomi Nakagawa, T. Uchiyama, T. Yoshida +9 more
2017Bioorganic & Medicinal Chemistry Letters9 citations
Semantic Scholar
Essential structure of orexin 1 receptor antagonist YNT-707, part III: Role of the 14-hydroxy and the 3-methoxy groups in antagonistic activity toward the orexin 1 receptor in YNT-707 derivatives lacking the 4,5-epoxy ring.
Naoshi Yamamoto, Sayaka Ohrui, T. Okada, Tsuyoshi Saitoh +10 more
2019Bioorganic & Medicinal Chemistry8 citations Open access
Semantic Scholar
Structural differences between the ligand-binding pockets of estrogen receptors alpha and beta
K. Kato, K. Fujii, Tomoki Nakayoshi, Yurie Watanabe +7 more
2018Journal of Physics, Conference Series7 citations Open access
Semantic Scholar
Correction to Synthesis of Potent and Selective Inhibitors of Aldo-Keto Reductase 1B10 and Their Efficacy against Proliferation, Metastasis, and Cisplatin Resistance of Lung Cancer Cells.
S. Endo, Shuang Xia, Miho Suyama, Yoshifumi Morikawa +13 more
2017Journal of Medicinal Chemistry7 citations
Semantic Scholar
PROCEEDINGS OF THE 3RD INTERNATIONAL CONFERENCE ON MOLECULAR SIMULATION Effects of initial settings on computational protein–ligand docking accuracies for several docking programs
A. Oda, N. Yamaotsu, S. Hirono, Yurie Watanabe +2 more
20157 citations
Semantic Scholar
Design, synthesis, structure-activity relationship studies, and evaluation of novel GLS1 inhibitors.
M. Jo, Keiichi Koizumi, Mizuho Suzuki, Daisuke Kanayama +8 more
2023Bioorganic & Medicinal Chemistry Letters6 citations Open access
Semantic Scholar
Molecular Interaction Fields Describing Halogen Bond Formable Areas on Protein Surfaces
Daichi Hayakawa, Yurie Watanabe, Hiroaki Gouda
2024Journal of Chemical Information and Modeling4 citations Open access
Semantic Scholar
Morphinan derivatives with an oxabicyclo[3.2.1]octane structure as dual agonists toward δ and κ opioid receptors.
Yuka Uenohara, Saori Tsumura, Shigeto Hirayama, Eika Higashi +4 more
2021Bioorganic & Medicinal Chemistry3 citations Open access
Semantic Scholar
Unpolarizable molecular model describing electron distribution for treating halogen bonds
Daichi Hayakawa, Yurie Watanabe, H. Gouda
20213 citations Open access
Semantic Scholar
Comparison of photoreactions of flutamide in acetonitrile and 2-propanol solvents in the absence of cage-forming compounds
Yurie Watanabe, S. Fukuyoshi, A. Oda
20153 citations
Semantic Scholar
Systematic preparation method of a molecular model explicitly describing electron distributions for halogen bonds
Daichi Hayakawa, Nanako Terauchi, Aika Iwasaki, Yurie Watanabe +1 more
2022Chemical Physics Letters1 citations Open access
Semantic Scholar
Effect of the Arg456His mutation on the three-dimensional structure of cytochrome P450 1A2 predicted by molecular dynamics simulations
Yurie Watanabe, K. Kato, S. Fukuyoshi, Masahiro Hiratsuka +4 more
2018Journal of Physics, Conference Series1 citations Open access
Semantic Scholar
Crystal Structure of N -[4-Hydroxy-3-nitro-5-(trifluoromethyl)phenyl]-2-methylpropaneamide
Yurie Watanabe, S. Fukuyoshi, A. Oda, R. Nakagaki
20131 citations Open access
Semantic Scholar
Molecular dynamics study of the interaction between PACAP (6’–38’) and the N-terminal extracellular domain of the human splice variant hPAC1-R-short, aiming at the development of neuropathic pain medicine
Yurie Watanabe, A. Oda, Hiroaki Gouda
2018Journal of Physics, Conference Series0 citations Open access
Semantic Scholar
野生型/突然変異型チトロームP450 1A2の三次元構造と構造柔軟性の分子動力学シミュレーションを用いた予測
Yurie Watanabe, Fukuyoshi Shuichi, M. Hiratsuka, Yamaotsu Noriyuki +3 more
20160 citations
Semantic Scholar
Root mean square fluctuations (RMSFs) for the wild type and mutants of CYP2D6.
Fukuyoshi Shuichi, Kometani Masaharu, Yurie Watanabe, M. Hiratsuka +5 more
20160 citations Open access
Semantic Scholar
Investigation of photoreaction for 2-nitrobenzofuran and its 3-methyl derivative
Yurie Watanabe, Tomohiro Tanaka, S. Fukuyoshi, A. Oda
20150 citations
Semantic Scholar
3P026 Computational studies for the influences of protein flexibilities on enzymatic activities of the wild type and mutants of CYP2B6(01B. Protein: Structure & Function,Poster,The 52nd Annual Meeting of the Biophysical Society of Japan(BSJ2014))
A. Oda, Kana Kobayashi, Yurie Watanabe, S. Fukuyoshi +4 more
20140 citations Open access
Semantic Scholar

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Daichi Hayakawa×9
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