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Anita Lerch · SciRah

Researcher profile · Semantic Scholar

Anita Lerch

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Anita Lerch — researcher profile on SciRah

h-index: 13
Works: 29
Citations: 1,043

Most-cited papers

QuasR: quantification and annotation of short reads in R
Dimos Gaidatzis, Anita Lerch, F. Hahne, Michael B. Stadler
2014Bioinform.320 citations Open access
Semantic Scholar
Reinvestigation of the Saccharomyces cerevisiae genome annotation by comparison to the genome of a related fungus: Ashbya gossypii
S. Brachat, F. Dietrich, Sylvia Voegeli, Zhihong Zhang +5 more
2003Genome Biology114 citations Open access
Semantic Scholar
Development of amplicon deep sequencing markers and data analysis pipeline for genotyping multi-clonal malaria infections
Anita Lerch, C. Koepfli, Natalie E. Hofmann, Camilla Messerli +6 more
2017bioRxiv107 citations Open access
Semantic Scholar
Estimating unobserved SARS-CoV-2 infections in the United States
T. Perkins, S. Cavany, S. Moore, Rachel J. Oidtman +2 more
2020Proceedings of the National Academy of Sciences of the United States of America85 citations Open access
Semantic Scholar
DNA Sequence Explains Seemingly Disordered Methylation Levels in Partially Methylated Domains of Mammalian Genomes
Dimos Gaidatzis, Lukas Burger, Rabih Murr, Anita Lerch +3 more
2014PLoS Genetics73 citations Open access
Semantic Scholar
Amplicon deep sequencing improves Plasmodium falciparum genotyping in clinical trials of antimalarial drugs
Maria Gruenberg, Anita Lerch, H. Beck, I. Felger
2019Scientific Reports60 citations Open access
Semantic Scholar
Over 100 Years of Rift Valley Fever: A Patchwork of Data on Pathogen Spread and Spillover
G. Bron, K. Strimbu, H. Cecilia, Anita Lerch +4 more
2021medRxiv53 citations Open access
Semantic Scholar
Longitudinal tracking and quantification of individual Plasmodium falciparum clones in complex infections
Anita Lerch, C. Koepfli, Natalie E. Hofmann, J. Kattenberg +4 more
2019Scientific Reports44 citations Open access
Semantic Scholar
Transcriptome and histone epigenome of Plasmodium vivax salivary-gland sporozoites point to tight regulatory control and mechanisms for liver-stage differentiation in relapsing malaria
I. Müller, A. Jex, Stefan H. I. Kappe, Sebastian A. Mikolajczak +16 more
2017bioRxiv42 citations Open access
Semantic Scholar
Impacts of K-12 school reopening on the COVID-19 epidemic in Indiana, USA
G. España, S. Cavany, Rachel J. Oidtman, Carly Barbera +7 more
2020medRxiv39 citations Open access
Semantic Scholar
Multiplexed ddPCR-amplicon sequencing reveals isolated Plasmodium falciparum populations amenable to local elimination in Zanzibar, Tanzania
A. Holzschuh, Anita Lerch, I. Gerlovina, B. Fakih +9 more
2023Nature Communications28 citations Open access
Semantic Scholar
Should Deep-Sequenced Amplicons Become the New Gold Standard for Analyzing Malaria Drug Clinical Trials?
S. Jones, Katherine Kay, E. Hodel, Maria Gruenberg +3 more
2021Antimicrobial Agents and Chemotherapy22 citations Open access
Semantic Scholar
Using a mobile nanopore sequencing lab for end-to-end genomic surveillance of Plasmodium falciparum: A feasibility study
A. Holzschuh, Anita Lerch, B. Fakih, S. M. Aliy +6 more
2024PLOS Global Public Health21 citations Open access
Semantic Scholar
Genetic variations of Plasmodium falciparum circumsporozoite protein and the impact on interactions with human immunoproteins and malaria vaccine efficacy.
C. Dieng, C. Ford, Anita Lerch, Dickson Doniou +6 more
2023Infection, Genetics and Evolution12 citations Open access
Semantic Scholar
Plasmodium falciparum transmission in the highlands of Ethiopia is driven by closely related and clonal parasites
A. Holzschuh, Y. Ewnetu, Lise Carlier, Anita Lerch +7 more
2023bioRxiv10 citations Open access
Semantic Scholar
Inferring person-to-person networks of Plasmodium falciparum transmission: are analyses of routine surveillance data up to the task?
J. H. Huber, Michelle S. Hsiang, N. Dlamini, M. Murphy +7 more
2022Malaria Journal4 citations Open access
Semantic Scholar
Highly multiplexed ddPCR-amplicon sequencing reveals strong Plasmodium falciparum population structure and isolated populations amenable to local elimination efforts in Zanzibar
A. Holzschuh, Anita Lerch, I. Gerlovina, B. Fakih +9 more
2023bioRxiv2 citations Open access
Semantic Scholar
Should deep-sequenced amplicons become the new gold-standard for analysing malaria drug clinical trials?
S. Jones, Katherine Kay, E. Hodel, Maria Gruenberg +3 more
2021bioRxiv2 citations Open access
Semantic Scholar
Inferring person-to-person networks of pathogen transmission: is routine surveillance data up to the task?
J. H. Huber, Michelle S. Hsiang, N. Dlamini, M. Murphy +7 more
2020medRxiv2 citations Open access
Semantic Scholar
Longitudinal tracking of Plasmodium falciparum clones in complex infections by amplicon deep sequencing
Anita Lerch, C. Koepfli, Natalie E. Hofmann, J. Kattenberg +4 more
2018bioRxiv2 citations Open access
Semantic Scholar
Somatic mutation footprinting reveals a unique tetranucleotide signature associated with intron–exon boundaries in lung cancer
Sam Wormald, Anita Lerch, D. Mouradov, L. O'Connor
2018Carcinogenesis2 citations
Semantic Scholar
Development of amplicon deep sequencing markers 1 and data analysis pipeline for genotyping multi-clonal 2 malaria infections 3 4
Anita Lerch, C. Koepfli, Natalie E. Hofmann, Camilla Messerli +7 more
20171 citations
Semantic Scholar
Protein interaction analysis of Plasmodium falciparum circumsporozoite protein variants with human immunoproteins explains RTS,S vaccine efficacy in Ghana
C. Dieng, C. Ford, Anita Lerch, Dickson Donu +7 more
2021bioRxiv0 citations Open access
Semantic Scholar
Methods for analysis of deep sequencing data from mixtures of Plasmodium falciparum clones or stage-specific transcriptomes
Anita Lerch
20180 citations
Semantic Scholar
Development of amplicon deep sequencing markers and data analysis pipeline for genotyping multi-clonal malaria infections
Anita Lerch, C. Koepfli, Natalie E. Hofmann, Camilla Messerli +6 more
2017BMC Genomics0 citations Open access
Semantic Scholar
Clinical Neurophysiology: Contents
Anita Lerch, Dimos Gaidatzis, Michael B. Stadler
20120 citations
Semantic Scholar
3 Example usage for individual Rbowtie functions
Anita Lerch, Dimos Gaidatzis, M. Stadler
20120 citations
Semantic Scholar
Classes of overlapping annotated ORFs in derived from comparison with the genome
Dietrich, Sylvia Voegeli, Zhihong Zhang, Larissa Stuart +5 more
20110 citations
Semantic Scholar
Additional data file 7
S. Brachat, F. Dietrich, Sylvia Voegeli, Zhihong Zhang +5 more
20030 citations
Semantic Scholar

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