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Shao-Hua Zhao · SciRah

Researcher profile · Semantic Scholar

Shao-Hua Zhao

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Shao-Hua Zhao — researcher profile on SciRah

h-index: 68
Works: 188
Citations: 15K

Most-cited papers

Validating the AMRFinder Tool and Resistance Gene Database by Using Antimicrobial Resistance Genotype-Phenotype Correlations in a Collection of Isolates
M. Feldgarden, V. Brover, D. Haft, A. Prasad +13 more
2019Antimicrobial Agents and Chemotherapy1,239 citations Open access
Semantic Scholar
Whole-Genome Sequencing for Detecting Antimicrobial Resistance in Nontyphoidal Salmonella
P. McDermott, G. Tyson, C. Kabera, Yuan-Sha Chen +6 more
2016Antimicrobial Agents and Chemotherapy326 citations Open access
Semantic Scholar
WGS accurately predicts antimicrobial resistance in Escherichia coli.
G. Tyson, P. McDermott, Cong Li, Yuan-Sha Chen +10 more
2015Journal of Antimicrobial Chemotherapy238 citations Open access
Semantic Scholar
Whole-Genome Sequencing Analysis Accurately Predicts Antimicrobial Resistance Phenotypes in Campylobacter spp
Shao-Hua Zhao, G. Tyson, Yuan-Sha Chen, Cong Li +6 more
2015Applied and Environmental Microbiology224 citations Open access
Semantic Scholar
Using Machine Learning To Predict Antimicrobial MICs and Associated Genomic Features for Nontyphoidal Salmonella
M. Nguyen, S. Long, P. McDermott, R. J. Olsen +5 more
2018Journal of Clinical Microbiology150 citations Open access
Semantic Scholar
Comparative Analysis of Extended-Spectrum-β-Lactamase CTX-M-65-Producing Salmonella enterica Serovar Infantis Isolates from Humans, Food Animals, and Retail Chickens in the United States
H. Tate, J. Folster, Chih-Hao Hsu, Jessica Chen +15 more
2017Antimicrobial Agents and Chemotherapy147 citations Open access
Semantic Scholar
Comparative Genomic Analysis and Virulence Differences in Closely Related Salmonella enterica Serotype Heidelberg Isolates from Humans, Retail Meats, and Animals
M. Hoffmann, Shao-Hua Zhao, J. Pettengill, Yan Luo +11 more
2014Genome Biology and Evolution116 citations Open access
Semantic Scholar
MRSA and multidrug-resistant Staphylococcus aureus in U.S. retail meats, 2010-2011.
B. Ge, S. Mukherjee, Chih-Hao Hsu, Johnnie A. Davis +9 more
2017Food microbiology112 citations
Semantic Scholar
The mcr-9 Gene of Salmonella and Escherichia coli Is Not Associated with Colistin Resistance in the United States
G. Tyson, Cong Li, Chih-Hao Hsu, S. Ayers +5 more
2020Antimicrobial Agents and Chemotherapy108 citations Open access
Semantic Scholar
Using machine learning to predict antimicrobial minimum inhibitory concentrations and associated genomic features for nontyphoidal Salmonella
M. Nguyen, S. Long, P. McDermott, R. J. Olsen +5 more
2018bioRxiv107 citations Open access
Semantic Scholar
Presence of disinfectant resistance genes in Escherichia coli isolated from retail meats in the USA.
L. Zou, J. Meng, P. McDermott, Fei Wang +4 more
2014Journal of Antimicrobial Chemotherapy107 citations
Semantic Scholar
Comparison of the Prevalences and Antimicrobial Resistances of Escherichia coli Isolates from Different Retail Meats in the United States, 2002 to 2008
Shao-Hua Zhao, K. Blickenstaff, S. Bodeis-Jones, S. Gaines +2 more
2012Applied and Environmental Microbiology99 citations Open access
Semantic Scholar
Allelic variation contributes to bacterial host specificity
Min Yue, Xiangan Han, Leon De Masi, Chun-Hong Zhu +17 more
2015Nature Communications98 citations Open access
Semantic Scholar
Zoonotic Source Attribution of Salmonella enterica Serotype Typhimurium Using Genomic Surveillance Data, United States
Shaokang Zhang, Shaoting Li, W. Gu, H. den Bakker +13 more
2019Emerging Infectious Diseases91 citations Open access
Semantic Scholar
A Multidrug-Resistant Salmonella Infantis Clone Is Spreading and Recombining in the United States
G. Tyson, Cong Li, L. Harrison, G. Martín +5 more
2020Microbial Drug Resistance80 citations Open access
Semantic Scholar
Whole-Genome Sequencing of Gentamicin-Resistant Campylobacter coli Isolated from U.S. Retail Meats Reveals Novel Plasmid-Mediated Aminoglycoside Resistance Genes
Yuan-Sha Chen, S. Mukherjee, M. Hoffmann, M. Kotewicz +7 more
2013Antimicrobial Agents and Chemotherapy75 citations Open access
Semantic Scholar
Use of whole-genome sequencing for Campylobacter surveillance from NARMS retail poultry in the United States in 2015.
C. A. Whitehouse, Shenia R. Young, Cong Li, Chih-Hao Hsu +2 more
2018Food microbiology72 citations
Semantic Scholar
The Use of Whole-Genome Sequencing by the Federal Interagency Collaboration for Genomics for Food and Feed Safety in the United States.
Eric L Stevens, H. Carleton, J. Beal, Glenn E. Tillman +41 more
2022Journal of Food Protection71 citations Open access
Semantic Scholar
Diversity and Antimicrobial Resistance of Salmonella enterica Isolates from Surface Water in Southeastern United States
Bao-Guang Li, G. Vellidis, Huanli Liu, M. Jay-Russell +4 more
2014Applied and Environmental Microbiology70 citations Open access
Semantic Scholar
Novel gentamicin resistance genes in Campylobacter isolated from humans and retail meats in the USA
Shao-Hua Zhao, S. Mukherjee, Yuan-Sha Chen, Cong Li +7 more
2015Journal of Antimicrobial Chemotherapy69 citations Open access
Semantic Scholar
Characterization of Extended-Spectrum Cephalosporin–Resistant Salmonella enterica Serovar Heidelberg Isolated from Food Animals, Retail Meat, and Humans in the United States 2009
J. Folster, G. Pecic, Aparna Singh, B. Duval +11 more
2012Foodborne pathogens and disease68 citations Open access
Semantic Scholar
Phylogenetics and Differentiation of Salmonella Newport Lineages by Whole Genome Sequencing
G. Cao, J. Meng, E. Strain, R. Stones +5 more
2013PLoS ONE67 citations Open access
Semantic Scholar
Antimicrobial Resistance Genes in Multidrug-Resistant Salmonella enterica Isolated from Animals, Retail Meats, and Humans in the United States and Canada
Lashanda M. Glenn, R. Lindsey, J. Folster, G. Pecic +7 more
2013Microbial Drug Resistance66 citations
Semantic Scholar
Using the NCBI AMRFinder Tool to Determine Antimicrobial Resistance Genotype-Phenotype Correlations Within a Collection of NARMS Isolates
M. Feldgarden, V. Brover, D. Haft, A. Prasad +13 more
2019bioRxiv62 citations Open access
Semantic Scholar
Antibiotic Resistance in Salmonella from Retail Foods of Animal Origin and Its Association with Disinfectant and Heavy Metal Resistance
Wen-Wen Deng, Y. Quan, Sheng-Zhi Yang, Lijuan Guo +9 more
2017Microbial Drug Resistance62 citations
Semantic Scholar
Non-O157 Shiga toxin-producing Escherichia coli in retail ground beef and pork in the Washington D.C. area.
Wenting Ju, Jin-Ling Shen, Yi Li, M. Toro +4 more
2012Food microbiology61 citations
Semantic Scholar
Retrospective Analysis of Salmonella, Campylobacter, Escherichia coli, and Enterococcus in Animal Feed Ingredients
B. Ge, P. Lafon, Peggy J. Carter, S. McDermott +9 more
2013Foodborne pathogens and disease56 citations
Semantic Scholar
Whole-Genome Sequence Analysis of CTX-M Containing Escherichia coli Isolates from Retail Meats and Cattle in the United States
D. Tadesse, Cong Li, S. Mukherjee, Chih-Hao Hsu +8 more
2018Microbial Drug Resistance54 citations Open access
Semantic Scholar
Comparative Genomic Analysis of 450 Strains of Salmonella enterica Isolated from Diseased Animals
Shao-Hua Zhao, Cong Li, Chih-Hao Hsu, G. Tyson +5 more
2020Genes49 citations Open access
Semantic Scholar
Antimicrobial Resistance in Nontyphoidal Salmonella
P. McDermott, Shao-Hua Zhao, H. Tate
2018Microbiology spectrum49 citations Open access
Semantic Scholar
Comparative Genomic Analysis of Virulence, Antimicrobial Resistance, and Plasmid Profiles of Salmonella Dublin Isolated from Sick Cattle, Retail Beef, and Humans in the United States
Chih-Hao Hsu, Cong Li, M. Hoffmann, P. McDermott +7 more
2019Microbial Drug Resistance48 citations Open access
Semantic Scholar
Association of Clustered Regularly Interspaced Short Palindromic Repeat (CRISPR) Elements with Specific Serotypes and Virulence Potential of Shiga Toxin-Producing Escherichia coli
M. Toro, G. Cao, Wenting Ju, M. Allard +4 more
2013Applied and Environmental Microbiology48 citations Open access
Semantic Scholar
Antimicrobial Resistance in Campylobacter Species: Mechanisms and Genomic Epidemiology.
C. A. Whitehouse, Shao-Hua Zhao, H. Tate
2018Advances in Applied Microbiology45 citations
Semantic Scholar
Occurrence of β-Lactamase Genes Among Non-Typhi Salmonella enterica Isolated from Humans, Food Animals, and Retail Meats in the United States and Canada
Maria Sjölund-Karlsson, Rebecca L. Howie, K. Blickenstaff, P. Boerlin +8 more
2013Microbial Drug Resistance43 citations
Semantic Scholar
Evaluation of Escherichia coli as an indicator for antimicrobial resistance in Salmonella recovered from the same food or animal ceca samples
Epiphanie Nyirabahizi, G. Tyson, Uday Dessai, Shao-Hua Zhao +6 more
202042 citations Open access
Semantic Scholar
Molecular characterization of antibiotic resistant Salmonella Typhimurium and Salmonella Kentucky isolated from pre- and post-chill whole broilers carcasses.
T. Mohamed, Shao-Hua Zhao, D. G. White, S. Parveen
2014Food microbiology42 citations
Semantic Scholar
Geography shapes the genomics and antimicrobial resistance of Salmonella enterica Serovar Enteritidis isolated from humans
G. Cao, Shao-Hua Zhao, Dai Kuang, Chih-Hao Hsu +10 more
2023Scientific Reports39 citations Open access
Semantic Scholar
Long-Read Sequencing Reveals Evolution and Acquisition of Antimicrobial Resistance and Virulence Genes in Salmonella enterica
Cong Li, G. Tyson, Chih-Hao Hsu, L. Harrison +6 more
2021Frontiers in Microbiology38 citations Open access
Semantic Scholar
Prevalence of Stx-producing Shigella species isolated from French Travelers Returning from the Caribbean: An Emerging Pathogen with International Implications
M. D. Gray, D. Lacher, S. Leonard, J. Abbott +6 more
2015Clinical Microbiology and Infection38 citations Open access
Semantic Scholar
Comparative genomic analysis and characterization of incompatibility group FIB plasmid encoded virulence factors of Salmonella enterica isolated from food sources
Bijay K. Khajanchi, Nur A. Hasan, Seon-Young Choi, Jing Han +4 more
2017BMC Genomics37 citations Open access
Semantic Scholar
Establishing Genotypic Cutoff Values To Measure Antimicrobial Resistance in Salmonella
G. Tyson, Shao-Hua Zhao, Cong Li, S. Ayers +4 more
2016Antimicrobial Agents and Chemotherapy37 citations Open access
Semantic Scholar
Genomic Diversity, Antimicrobial Resistance, and Virulence Gene Profiles of Salmonella Serovar Kentucky Isolated from Humans, Food, and Animal Ceca Content Sources in the United States
H. Tate, Chih-Hao Hsu, Jessica Chen, Jing Han +7 more
2022Foodborne pathogens and disease36 citations Open access
Semantic Scholar
Identification of Plasmid-Mediated Quinolone Resistance in Salmonella Isolated from Swine Ceca and Retail Pork Chops in the United States
G. Tyson, H. Tate, Shao-Hua Zhao, Cong Li +3 more
2017Antimicrobial Agents and Chemotherapy36 citations Open access
Semantic Scholar
Distribution of Pathogenicity Islands OI-122, OI-43/48, and OI-57 and a High-Pathogenicity Island in Shiga Toxin-Producing Escherichia coli
Wenting Ju, Jin-Ling Shen, M. Toro, Shao-Hua Zhao +1 more
2013Applied and Environmental Microbiology36 citations Open access
Semantic Scholar
Comparative Sequence Analysis of Multidrug-Resistant IncA/C Plasmids from Salmonella enterica
M. Hoffmann, J. Pettengill, N. González-Escalona, John J. Miller +6 more
2017Frontiers in Microbiology35 citations Open access
Semantic Scholar
Characterization of Multidrug-Resistant Salmonella enterica Serovar Heidelberg from a Ground Turkey-Associated Outbreak in the United States in 2011
J. Folster, G. Pecic, R. Rickert, Julia Taylor +4 more
2012Antimicrobial Agents and Chemotherapy35 citations Open access
Semantic Scholar
Complete Genome Sequence of a Multidrug-Resistant Salmonella enterica Serovar Typhimurium var. 5− Strain Isolated from Chicken Breast
M. Hoffmann, T. Muruvanda, M. Allard, J. Korlach +8 more
2013Genome Announcements33 citations Open access
Semantic Scholar
Using whole-genome sequencing to determine appropriate streptomycin epidemiological cutoffs for Salmonella and Escherichia coli
G. Tyson, Cong Li, S. Ayers, P. McDermott +1 more
2016FEMS Microbiology Letters31 citations Open access
Semantic Scholar
Virulence characterization of non-O157 Shiga toxin-producing Escherichia coli isolates from food, humans and animals.
Jin-Ling Shen, L. Rump, Wenting Ju, Jing-Dong Shao +3 more
2015Food microbiology31 citations
Semantic Scholar
Genomic Characterization of Novel Listeria monocytogenes Serotype 4b Variant Strains
P. Laksanalamai, Bi-Xing Huang, Jonathan L. Sabo, L. Burall +3 more
2014PLoS ONE29 citations Open access
Semantic Scholar

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