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M. Groudine · SciRah

Researcher profile · Semantic Scholar

M. Groudine

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M. Groudine — researcher profile on SciRah

h-index: 92
Works: 239
Citations: 32K

Most-cited papers

A Comparative Encyclopedia of DNA Elements in the Mouse Genome
Feng Yue, Yong Cheng, A. Breschi, J. Vierstra +133 more
2014Nature1,636 citations Open access
Semantic Scholar
Controlling the double helix
G. Felsenfeld, M. Groudine
2003Nature1,227 citations
Semantic Scholar
Functional and mechanistic diversity of distal transcription enhancers
M. Bulger, M. Groudine
2011Cell1,115 citations Open access
Semantic Scholar
The histone modification pattern of active genes revealed through genome-wide chromatin analysis of a higher eukaryote.
D. Schübeler, David M. MacAlpine, David Scalzo, C. Wirbelauer +8 more
2004Genes & Development878 citations Open access
Semantic Scholar
An expansive human regulatory lexicon encoded in transcription factor footprints
Shane J. Neph, J. Vierstra, Andrew B. Stergachis, Alex P. Reynolds +33 more
2012Nature843 citations Open access
Semantic Scholar
Proximity among distant regulatory elements at the beta-globin locus requires GATA-1 and FOG-1.
Christopher R. Vakoc, D. L. Letting, N. Gheldof, T. Sawado +5 more
2005Molecules and Cells568 citations Open access
Semantic Scholar
Intragenic DNA methylation alters chromatin structure and elongation efficiency in mammalian cells
M. Lorincz, D. Dickerson, M. Schmitt, M. Groudine
2004Nature Structural &Molecular Biology502 citations
Semantic Scholar
An encyclopedia of mouse DNA elements (Mouse ENCODE)
J. Stamatoyannopoulos, Michael Snyder, R. Hardison, B. Ren +82 more
2012Genome Biology480 citations Open access
Semantic Scholar
Developmental and species-divergent globin switching are driven by BCL11A
V. Sankaran, Jian Xu, T. Ragoczy, Gregory C. Ippolito +8 more
2009Nature410 citations Open access
Semantic Scholar
Heme regulates the dynamic exchange of Bach1 and NF-E2-related factors in the Maf transcription factor network.
Ji-Ying Sun, M. Brand, Y. Zenke, S. Tashiro +2 more
2004Proceedings of the National Academy of Sciences of the United States of America371 citations Open access
Semantic Scholar
The locus control region is required for association of the murine beta-globin locus with engaged transcription factories during erythroid maturation.
T. Ragoczy, M. Bender, A. Telling, Rachel Byron +1 more
2006Genes & Development353 citations Open access
Semantic Scholar
Genome-wide DNA replication profile for Drosophila melanogaster: a link between transcription and replication timing
D. Schübeler, David Scalzo, C. Kooperberg, Bas van Steensel +2 more
2002Nature Genetics316 citations
Semantic Scholar
Form follows function: The genomic organization of cellular differentiation.
S. Kosak, M. Groudine
2004Genes & Development289 citations Open access
Semantic Scholar
Mouse regulatory DNA landscapes reveal global principles of cis-regulatory evolution
J. Vierstra, Eric Rynes, Richard S. Sandstrom, Miaohua Zhang +33 more
2014Science265 citations Open access
Semantic Scholar
Dynamic changes in transcription factor complexes during erythroid differentiation revealed by quantitative proteomics
M. Brand, J. Ranish, Nicolas T. Kummer, Joan Hamilton +6 more
2004Nature Structural &Molecular Biology227 citations
Semantic Scholar
Conservation of trans-acting networks during mammalian regulatory evolution
Andrew B. Stergachis, Shane J. Neph, Richard S. Sandstrom, E. Haugen +25 more
2014Nature225 citations Open access
Semantic Scholar
Enhancers: the Abundance and Function of Regulatory Sequences Beyond Promoters
M. Bulger, M. Groudine
2009Developmental Biology207 citations Open access
Semantic Scholar
A Complex Chromatin Landscape Revealed by Patterns of Nuclease Sensitivity and Histone Modification within the Mouse β-Globin Locus
M. Bulger, D. Schübeler, M. Bender, Joan Hamilton +3 more
2003Molecular and Cellular Biology191 citations Open access
Semantic Scholar
The beta -globin locus control region (LCR) functions primarily by enhancing the transition from transcription initiation to elongation.
T. Sawado, J. Halow, M. Bender, M. Groudine
2003Genes & Development181 citations Open access
Semantic Scholar
A Functional Element Necessary for Fetal Hemoglobin Silencing
V. Sankaran, Jian Xu, Rachel Byron, H. Greisman +7 more
2011New England Journal of Medicine169 citations Open access
Semantic Scholar
The histone H3K4-specific demethylase KDM5B binds to its substrate and product through distinct PHD fingers
B. J. Klein, Lian-Hua Piao, Y. Xi, Héctor Rincón-Arano +15 more
2014Cell Reports166 citations Open access
Semantic Scholar
Activator-mediated recruitment of the MLL2 methyltransferase complex to the beta-globin locus.
Celina Demers, C. Chaturvedi, J. Ranish, Gaëtan Juban +6 more
2007Molecules and Cells145 citations Open access
Semantic Scholar
A genetic analysis of chromosome territory looping: diverse roles for distal regulatory elements
T. Ragoczy, A. Telling, T. Sawado, M. Groudine +1 more
2004Chromosome Research142 citations
Semantic Scholar
Gene Order and Dynamic Domains
S. Kosak, M. Groudine
2004Science139 citations
Semantic Scholar
On emerging nuclear order
I. Rajapakse, M. Groudine
2011Journal of Cell Biology136 citations Open access
Semantic Scholar
HP1α is a chromatin crosslinker that controls nuclear and mitotic chromosome mechanics
Amy R. Strom, Ronald J. Biggs, E. Banigan, Xiao-Tao Wang +12 more
2020bioRxiv132 citations Open access
Semantic Scholar
The nucleosomal barrier to promoter escape by RNA polymerase II is overcome by the chromatin remodeler Chd1
P. Skene, A. Hernández, M. Groudine, S. Henikoff
2014eLife130 citations Open access
Semantic Scholar
Coordinate Gene Regulation during Hematopoiesis Is Related to Genomic Organization
S. Kosak, David Scalzo, S. Alworth, Fu-Sheng Li +4 more
2007PLoS Biology125 citations Open access
Semantic Scholar
DNA Methylation Density Influences the Stability of an Epigenetic Imprint and Dnmt3a/b-Independent De Novo Methylation
M. Lorincz, D. Schübeler, Shauna R Hutchinson, D. Dickerson +1 more
2002Molecular and Cellular Biology124 citations Open access
Semantic Scholar
Something Silent This Way Forms: The Functional Organization of the Repressive Nuclear Compartment
Joan C. Ritland Politz, David Scalzo, M. Groudine
2013Annual Review of Cell and Developmental Biology123 citations Open access
Semantic Scholar
Distinct Activities of Myf5 and MyoD Indicate Separate Roles in Skeletal Muscle Lineage Specification and Differentiation
M. Conerly, Z. Yao, Jun-Wen Zhong, M. Groudine +1 more
2016Developmental Cell116 citations Open access
Semantic Scholar
DNA replication-timing analysis of human chromosome 22 at high resolution and different developmental states.
Eric J White, David Scalzo, Thomas E. Royce, Steven Kosak +7 more
2004Proceedings of the National Academy of Sciences of the United States of America112 citations Open access
Semantic Scholar
Cohesin Mediates Chromatin Interactions That Regulate Mammalian β-globin Expression*
Richard Chien, Weihua Zeng, S. Kawauchi, M. Bender +10 more
2011Journal of Biological Chemistry110 citations Open access
Semantic Scholar
Bivalent domains enforce transcriptional memory of DNA methylated genes in cancer cells
Jairo Rodriguez, Mar Muñoz, L. Vives, Costa Frangou +2 more
2008Proceedings of the National Academy of Sciences of the United States of America108 citations Open access
Semantic Scholar
The emergence of lineage-specific chromosomal topologies from coordinate gene regulation
I. Rajapakse, M. Perlman, David Scalzo, C. Kooperberg +2 more
2009Proceedings of the National Academy of Sciences of the United States of America101 citations Open access
Semantic Scholar
Molecular basis for chromatin binding and regulation of MLL5
Muzaffar Ali, Héctor Rincón-Arano, Wei Zhao, S. Rothbart +6 more
2013Proceedings of the National Academy of Sciences of the United States of America79 citations Open access
Semantic Scholar
Multiple functions of Ldb1 required for beta-globin activation during erythroid differentiation.
Sang-Hyun Song, AeRi Kim, T. Ragoczy, M. Bender +2 more
2010Blood76 citations Open access
Semantic Scholar
An Unmethylated 3′ Promoter-Proximal Region Is Required for Efficient Transcription Initiation
Ruth Appanah, D. Dickerson, P. Goyal, M. Groudine +1 more
2007PLoS Genetics74 citations Open access
Semantic Scholar
Dynamics and control of state-dependent networks for probing genomic organization
I. Rajapakse, M. Groudine, M. Mesbahi
2011Proceedings of the National Academy of Sciences of the United States of America70 citations Open access
Semantic Scholar
Flanking HS-62.5 and 3' HS1, and regions upstream of the LCR, are not required for beta-globin transcription.
M. Bender, Rachel Byron, T. Ragoczy, A. Telling +2 more
2006Blood65 citations Open access
Semantic Scholar
The Human β-Globin Replication Initiation Region Consists of Two Modular Independent Replicators
Lixin Wang, C. Lin, S. Brooks, D. Cimbora +2 more
2004Molecular and Cellular Biology64 citations Open access
Semantic Scholar
Dido3 PHD Modulates Cell Differentiation and Division
J. Gatchalian, A. Fütterer, S. Rothbart, Qiong Tong +7 more
2013Cell Reports63 citations Open access
Semantic Scholar
Wash interacts with lamin and affects global nuclear organization
J. M. Verboon, Héctor Rincón-Arano, Timothy R. Werwie, J. Delrow +4 more
2015Current Biology61 citations Open access
Semantic Scholar
UpSET recruits HDAC complexes and restricts chromatin accessibility and histone acetylation at promoter regions
Héctor Rincón-Arano, J. Halow, J. Delrow, S. Parkhurst +1 more
2012Cell61 citations Open access
Semantic Scholar
The hypersensitive sites of the murine β-globin locus control region act independently to affect nuclear localization and transcriptional elongation.
M. Bender, T. Ragoczy, JongJoo Lee, Rachel Byron +3 more
2012Blood52 citations Open access
Semantic Scholar
DNA replication-timing analysis of human chromosome 22 at high resolution and different developmental states.
Eric J White, O. Emanuelsson, David Scalzo, Thomas E. Royce +7 more
2004Proceedings of the National Academy of Sciences of the United States of America52 citations Open access
Semantic Scholar
ChIPs of the beta-globin locus: unraveling gene regulation within an active domain.
M. Bulger, T. Sawado, D. Schübeler, M. Groudine
2002Current Opinion in Genetics and Development43 citations
Semantic Scholar
Prelamin A processing, accumulation and distribution in normal cells and laminopathy disorders
A. Casasola, David Scalzo, V. Nandakumar, J. Halow +3 more
2016The Nucleus38 citations Open access
Semantic Scholar
The redundancy of the mammalian heterochromatic compartment
Joan C. Ritland Politz, David Scalzo, M. Groudine
2015Current Opinion in Genetics and Development38 citations Open access
Semantic Scholar
Functional redundancy in the nuclear compartmentalization of the late-replicating genome
T. Ragoczy, A. Telling, David Scalzo, C. Kooperberg +1 more
2014The Nucleus37 citations Open access
Semantic Scholar

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