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I. Zvyagin · SciRah

Researcher profile · Semantic Scholar

I. Zvyagin

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I. Zvyagin — researcher profile on SciRah

h-index: 24
Works: 62
Citations: 3,788

Most-cited papers

VDJdb: a curated database of T-cell receptor sequences with known antigen specificity
M. Shugay, D. Bagaev, I. Zvyagin, R. Vroomans +24 more
2017Nucleic Acids Res.576 citations Open access
Semantic Scholar
VDJtools: Unifying Post-analysis of T Cell Receptor Repertoires
M. Shugay, D. Bagaev, M. Turchaninova, D. Bolotin +9 more
2015PLoS Comput. Biol.561 citations Open access
Semantic Scholar
VDJdb in 2019: database extension, new analysis infrastructure and a T-cell receptor motif compendium
Dmitry V. Bagaev, R. Vroomans, J. Samir, U. Stervbo +14 more
2019Nucleic Acids Res.407 citations Open access
Semantic Scholar
tcR: an R package for T cell receptor repertoire advanced data analysis
V. Nazarov, M. Pogorelyy, E. Komech, I. Zvyagin +5 more
2015BMC Bioinformatics224 citations Open access
Semantic Scholar
VDJdb in the pandemic era: a compendium of T cell receptors specific for SARS-CoV-2
Mikhail Goncharov, Dmitry V. Bagaev, Dmitrii S. Shcherbinin, I. Zvyagin +22 more
2022Nature Methods207 citations Open access
Semantic Scholar
MiTCR: software for T-cell receptor sequencing data analysis
D. Bolotin, M. Shugay, I. Mamedov, E. Putintseva +4 more
2013Nature Methods185 citations
Semantic Scholar
Preparing Unbiased T-Cell Receptor and Antibody cDNA Libraries for the Deep Next Generation Sequencing Profiling
I. Mamedov, O. Britanova, I. Zvyagin, M. Turchaninova +4 more
2013Frontiers in Immunology170 citations Open access
Semantic Scholar
Next generation sequencing for TCR repertoire profiling: Platform‐specific features and correction algorithms
D. Bolotin, I. Mamedov, O. Britanova, I. Zvyagin +6 more
2012European Journal of Immunology160 citations Open access
Semantic Scholar
Autoimmunity-associated T cell receptors recognize HLA-B*27-bound peptides
Xin-Bo Yang, Lee Garner, I. Zvyagin, Michael A. Paley +15 more
2022Nature155 citations Open access
Semantic Scholar
Pairing of T‐cell receptor chains via emulsion PCR
M. Turchaninova, O. Britanova, D. Bolotin, M. Shugay +9 more
2013European Journal of Immunology132 citations Open access
Semantic Scholar
Phosphorus starvation and luxury uptake in green microalgae revisited
A. Solovchenko, I. Khozin-Goldberg, I. Selyakh, L. Semenova +13 more
2019Algal Research127 citations
Semantic Scholar
Distinctive properties of identical twins' TCR repertoires revealed by high-throughput sequencing
I. Zvyagin, M. Pogorelyy, Marina E. Ivanova, E. Komech +8 more
2014Proceedings of the National Academy of Sciences of the United States of America115 citations Open access
Semantic Scholar
Targeted depletion of TRBV9+ T cells as immunotherapy in a patient with ankylosing spondylitis
O. Britanova, K. R. Lupyr, D. B. Staroverov, I. Shagina +19 more
2023Nature Medicine103 citations Open access
Semantic Scholar
Quantitative tracking of T cell clones after haematopoietic stem cell transplantation
I. Mamedov, O. Britanova, D. Bolotin, A. V. Chkalina +10 more
2011EMBO Molecular Medicine67 citations Open access
Semantic Scholar
CD8+ T cells with characteristic T cell receptor beta motif are detected in blood and expanded in synovial fluid of ankylosing spondylitis patients
E. Komech, M. Pogorelyy, E. Egorov, O. Britanova +10 more
2018Rheumatology56 citations
Semantic Scholar
Tracking T-cell immune reconstitution after TCRαβ/CD19-depleted hematopoietic cells transplantation in children
I. Zvyagin, I. Mamedov, O. Tatarinova, E. A. Komech +12 more
2017Leukemia52 citations
Semantic Scholar
Exploring the pre-immune landscape of antigen-specific T cells
M. Pogorelyy, A. D. Fedorova, J. E. McLaren, K. Ladell +8 more
2018Genome Medicine48 citations Open access
Semantic Scholar
Contribution of functional KIR3DL1 to ankylosing spondylitis
I. Zvyagin, I. Mamedov, O. Britanova, D. Staroverov +9 more
2010Cellular & Molecular Immunology41 citations Open access
Semantic Scholar
Structure-based prediction of T cell receptor recognition of unseen epitopes using TCRen
Vadim Karnaukhov, Dmitrii S. Shcherbinin, A. Chugunov, D. Chudakov +3 more
2024Nature Computational Science38 citations
Semantic Scholar
HLA variants have different preferences to present proteins with specific molecular functions which are complemented in frequent haplotypes
V. Karnaukhov, Wayne Paes, Isaac B. Woodhouse, Thomas Partridge +9 more
2022Frontiers in Immunology35 citations Open access
Semantic Scholar
VDJviz: a versatile browser for immunogenomics data
D. Bagaev, I. Zvyagin, E. Putintseva, M. Izraelson +3 more
2016BMC Genomics35 citations Open access
Semantic Scholar
Universal and rapid method for purification of GFP-like proteins by the ethanol extraction.
Olga N Samarkina, A. G. Popova, E. Gvozdik, A. V. Chkalina +7 more
2009Protein Expression and Purification35 citations
Semantic Scholar
An overview of immunoinformatics approaches and databases linking T cell receptor repertoires to their antigen specificity
I. Zvyagin, Vasily O Tsvetkov, D. Chudakov, M. Shugay
2019Immunogenetics34 citations
Semantic Scholar
TCR repertoire profiling revealed antigen-driven CD8+ T cell clonal groups shared in synovial fluid of patients with spondyloarthritis
E. Komech, A. Koltakova, A. Barinova, Anastasia A. Minervina +10 more
2022Frontiers in Immunology27 citations Open access
Semantic Scholar
Effectiveness and safety of BCD180, anti-TRBV9+ T-lymphocytes monoclonal antibody in patients with active radiographic axial spondyloarthritis: 36-week results of double-blind randomized placebo-controlled phase II clinical study ELEFTA
E. Nasonov, V. Mazurov, A. Lila, T. Dubinina +30 more
2024Rheumatology Science and Practice19 citations Open access
Semantic Scholar
T-cell tracking, safety, and effect of low-dose donor memory T-cell infusions after αβ T cell-depleted hematopoietic stem cell transplantation
S. Blagov, I. Zvyagin, L. Shelikhova, R. Khismatullina +17 more
2020Bone Marrow Transplantation18 citations
Semantic Scholar
Quantitative profiling reveals minor changes of T cell receptor repertoire in response to subunit inactivated influenza vaccine.
A. L. Sycheva, M. Pogorelyy, E. Komech, Anastasia A. Minervina +5 more
2018Vaccine18 citations
Semantic Scholar
Individual characterization of stably expanded T cell clones in ankylosing spondylitis patients
Ilgar Z. Mamedov, O. Britanova, A. V. Chkalina, D. Staroverov +11 more
2009Autoimmunity17 citations
Semantic Scholar
Clonal diversity predicts persistence of SARS-CoV-2 epitope-specific T-cell response
K. Zornikova, A. Khmelevskaya, S. Sheetikov, D. Kiryukhin +4 more
2022Communications Biology15 citations Open access
Semantic Scholar
Deconvolution of B cell receptor repertoire in multiple sclerosis patients revealed a delay in tBreg maturation
Y. Lomakin, I. Zvyagin, L. A. Ovchinnikova, Marsel R Kabilov +15 more
2022Frontiers in Immunology14 citations Open access
Semantic Scholar
The Efficacy and Safety of BCD-180, an Anti-TRBV9+ T cell Monoclonal Antibody, in Patients with Active Radiographic Axial Spondyloarthritis: 36-week Results from the Randomized, Double-Blind, Placebo-Controlled Phase 2 Clinical Study ELEFTA
E. Nasonov, V. Mazurov, A. Lila, T. Dubinina +30 more
2025Doklady Biochemistry and Biophysics12 citations
Semantic Scholar
Memory persistence and differentiation into antibody-secreting cells accompanied by positive selection in longitudinal BCR repertoires
Artem Mikelov, Evgeniia I. Alekseeva, E. Komech, D. B. Staroverov +5 more
2022bioRxiv12 citations Open access
Semantic Scholar
Reliability of immune receptor rearrangements as genetic markers for minimal residual disease monitoring
V. Nazarov, A. Minervina, A. Komkov, M. Pogorelyy +6 more
2016Bone Marrow Transplantation12 citations
Semantic Scholar
Inactivated tick-borne encephalitis vaccine elicits several overlapping waves of T cell response
A. L. Sycheva, E. Komech, M. Pogorelyy, Anastasia A. Minervina +8 more
2022Frontiers in Immunology11 citations Open access
Semantic Scholar
Association of ERAP1 Allelic Variants with Risk of Ankylosing Spondylitis
I. Zvyagin, V. Yu Dorodnykh, Ilgar Z. Mamedov, D. B. Staroverov +3 more
2010Acta Naturae10 citations Open access
Semantic Scholar
Surface NKG2C Identifies Differentiated αβT-Cell Clones Expanded in Peripheral Blood
E. Kovalenko, I. Zvyagin, M. Streltsova, Artem Mikelov +4 more
2021Frontiers in Immunology9 citations Open access
Semantic Scholar
Clonal structure and the specificity of vaccine-induced T cell response to SARS-CoV-2 Spike protein
S. А. Sheetikov, A. Khmelevskaya, K. Zornikova, I. Zvyagin +15 more
2024Frontiers in Immunology8 citations Open access
Semantic Scholar
Detecting T-cell clonal expansions and quantifying clone survival using deep profiling of immune repertoires
A. Pavlova, I. Zvyagin, M. Shugay
2024Frontiers in Immunology8 citations Open access
Semantic Scholar
HLA binding of self-peptides is biased towards proteins with specific molecular functions
V. Karnaukhov, Wayne Paes, Isaac B. Woodhouse, Thomas Partridge +9 more
2021bioRxiv8 citations Open access
Semantic Scholar
Large-scale template-based structural modeling of T-cell receptors with known antigen specificity reveals complementarity features
Dmitrii S. Shcherbinin, V. Karnaukhov, I. Zvyagin, D. Chudakov +1 more
2023bioRxiv7 citations Open access
Semantic Scholar
TCRen: predicting TCR recognition of unseen epitopes based on residue-level pairwise statistical potential
V. Karnaukhov, Dmitrii S. Shcherbinin, A. Chugunov, D. Chudakov +3 more
2022bioRxiv5 citations Open access
Semantic Scholar
The oligoclonal expansion of T cells: The investigation of its stability over time
Anna V. Chkalina, I. Zvyagin, I. Mamedov, O. Britanova +2 more
2010Russian journal of bioorganic chemistry2 citations
Semantic Scholar
OP0027 AS-RELATED TCR BETA CLONOTYPES ARE PRESENT IN DIFFERENT INFLAMED TISSUES OF PATIENTS WITH SPONDYLOARTHROPATHIES
E. Komech, A. Barinova, E. Shmidt, T. Korotaeva +12 more
20211 citations Open access
Semantic Scholar
POS0004 T-CELL REPERTOIRE OF SYNOVIAL FLUID IN SPONDYLOARTHROPATHIES EXHIBITS HALLMARKS OF HLA-DEPENDENT CLONAL EXPANSIONS AND REMAINS STABLE OVER 1.5 YEARS
E. Komech, A. Koltakova, E. Shmidt, A. Barinova +5 more
20211 citations
Semantic Scholar
Correlated dynamics of serum IGE and IGE+ clonotype count with allergen air level in seasonal allergic rhinitis
AI Mikelov, D. B. Staroverov, Ekaterina A. Komech, YuB Lebedev +2 more
2019IMMUNO-ONCOLOGY1 citations Open access
Semantic Scholar
Characterization of the T-cell Repertoire after Autologous HSCT in Patients with Ankylosing Spondylitis
E. Komech, I. Zvyagin, M. Pogorelyy, I. Mamedov +2 more
2018Acta Naturae1 citations Open access
Semantic Scholar
TCR clonotyping of paired blood and tonsillar T-follicular cells reveals the mixed origin of CD38high Tfrs
S. Sokolova, Vladimir A. Grigoriants, I. Shagina, Ekaterina V. Barsova +7 more
2026Frontiers in Immunology0 citations Open access
Semantic Scholar
Generation of the RCPCMi014-A and RCPCMi014-B lines from T-lymphocytes of a healthy donor and verification of their monoclonal origin by TCR V(D)J rearrangement analysis
D. Sherman, M. Bogomiakova, E. A. Kastueva, I. Zvyagin +8 more
2026Vavilovskii zhurnal genetiki i selektsii0 citations Open access
Semantic Scholar
Abundance of human T-cell epitopes in microbial proteomes
V. Kovaleva, I. Zvyagin
2023bioRxiv0 citations Open access
Semantic Scholar
SARS-CoV-2 epitope-specific CD8+ clonotypes persist 8 month post-infection despite reduced clonality.
K. Zornikova, A. Khmelevskaya, S. Sheetikov, O. Shcherbakova +4 more
2022Journal of Immunology0 citations
Semantic Scholar

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