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T. Furuta · SciRah

Researcher profile · Semantic Scholar

T. Furuta

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T. Furuta — researcher profile on SciRah

h-index: 16
Works: 112
Citations: 906

Most-cited papers

Minimum Free Energy Path of Ligand-Induced Transition in Adenylate Kinase
Y. Matsunaga, H. Fujisaki, T. Terada, T. Furuta +2 more
2012PLoS Comput. Biol.92 citations Open access
Semantic Scholar
The Tryptophan Residue at the Active Site Tunnel Entrance of Trichoderma reesei Cellobiohydrolase Cel7A Is Important for Initiation of Degradation of Crystalline Cellulose*
A. Nakamura, T. Tsukada, S. Auer, T. Furuta +4 more
2013Journal of Biological Chemistry84 citations Open access
Semantic Scholar
Processive chitinase is Brownian monorail operated by fast catalysis after peeling rail from crystalline chitin
A. Nakamura, K. Okazaki, T. Furuta, M. Sakurai +1 more
2018Nature Communications73 citations Open access
Semantic Scholar
Highly Ordered Polypeptide with UCST Phase Separation Behavior.
Sotaro Kuroyanagi, Naohiko Shimada, Shota Fujii, T. Furuta +3 more
2018Journal of the American Chemical Society60 citations
Semantic Scholar
Disturbed biopterin and folate metabolism in the Qdpr‐deficient mouse
Feng Xu, Y. Sudo, Sho Sanechika, J. Yamashita +11 more
2014FEBS Letters40 citations
Semantic Scholar
The power stroke driven by ATP binding in CFTR as studied by molecular dynamics simulations.
Tomoka Furukawa-Hagiya, T. Furuta, S. Chiba, Y. Sohma +1 more
2013Journal of Physical Chemistry B31 citations
Semantic Scholar
A Computational Study of the Interaction of Amphiphilic α-Helical Cell-Penetrating Peptides with Heparan Sulfate
Yang Ji, T. Furuta, M. Sakurai, H. Tsutsumi +1 more
201428 citations
Semantic Scholar
Analysis of the structural and functional roles of coupling helices in the ATP-binding cassette transporter MsbA through enzyme assays and molecular dynamics simulations.
T. Furuta, T. Yamaguchi, H. Kato, M. Sakurai
2014Biochemistry23 citations
Semantic Scholar
Different inhibitory potency of febuxostat towards mammalian and bacterial xanthine oxidoreductases: insight from molecular dynamics
H. Kikuchi, H. Fujisaki, T. Furuta, K. Okamoto +2 more
2012Scientific Reports20 citations Open access
Semantic Scholar
Two Trk/Ktr/HKT-type potassium transporters, TrkG and TrkH, perform distinct functions in Escherichia coli K-12
Ellen Tanudjaja, Naomi Hoshi, Kaneyoshi Yamamoto, K. Ihara +4 more
2022Journal of Biological Chemistry19 citations Open access
Semantic Scholar
Miniaturization of Bright Light-Emitting Luciferase ALuc: picALuc.
Y. Ohmuro-Matsuyama, T. Furuta, Hayato Matsui, Masaki Kanai +1 more
2022ACS Chemical Biology18 citations
Semantic Scholar
Structural dynamics of ABC transporters: molecular simulation studies.
T. Furuta
2021Biochemical Society Transactions17 citations
Semantic Scholar
ATP Hydrolysis Mechanism in a Maltose Transporter Explored by QM/MM Metadynamics Simulation.
W. Hsu, T. Furuta, M. Sakurai
2016Journal of Physical Chemistry B17 citations
Semantic Scholar
Design Strategy to Create Antibody Mimetics Harbouring Immobilised Complementarity Determining Region Peptides for Practical Use
T. Kadonosono, Wanaporn Yimchuen, Yumi Ota, Kyra See +7 more
2020Scientific Reports16 citations Open access
Semantic Scholar
ATP-induced conformational changes of nucleotide-binding domains in an ABC transporter. Importance of the water-mediated entropic force.
Tomohiko Hayashi, S. Chiba, Yu Kaneta, T. Furuta +1 more
2014Journal of Physical Chemistry B16 citations
Semantic Scholar
Molecular dynamics simulation study on the structural instability of the most common cystic fibrosis-associated mutant ΔF508-CFTR
Mitsuhiko Odera, T. Furuta, Y. Sohma, M. Sakurai
2018Biophysics and Physicobiology15 citations Open access
Semantic Scholar
Boric acid transport activity of human aquaporins expressed in Xenopus oocytes
Kazutaka Ushio, Erika Watanabe, Takehiro Kamiya, Ayumi Nagashima +5 more
2022Physiological Reports14 citations Open access
Semantic Scholar
Cationic Copolymer‐Chaperoned 2D–3D Reversible Conversion of Lipid Membranes
Naohiko Shimada, Hirotaka Kinoshita, Takuma Umegae, Satomi Azumai +10 more
2019Advances in Materials14 citations
Semantic Scholar
Dynamics and structural changes induced by ATP and/or substrate binding in the inward-facing conformation state of P-glycoprotein
Y. Watanabe, W. Hsu, S. Chiba, Tomohiko Hayashi +2 more
201314 citations
Semantic Scholar
Group 3 LEA Protein Model Peptides Suppress Heat-Induced Lysozyme Aggregation. Elucidation of the Underlying Mechanism Using Coarse-Grained Molecular Simulations.
T. Furuki, Yuta Takahashi, Rie Hatanaka, T. Kikawada +2 more
2020Journal of Physical Chemistry B13 citations Open access
Semantic Scholar
Analysis of the Free Energy Landscapes for the Opening-Closing Dynamics of the Maltose Transporter ATPase MalK2 Using Enhanced-Sampling Molecular Dynamics Simulation.
W. Hsu, T. Furuta, M. Sakurai
2015Journal of Physical Chemistry B13 citations
Semantic Scholar
S-Series Coelenterazine-Driven Combinatorial Bioluminescence Imaging Systems for Mammalian Cells
Genta Kamiya, Nobuo Kitada, T. Furuta, T. Hirano +2 more
2023International Journal of Molecular Sciences12 citations Open access
Semantic Scholar
Multiple dimeric structures and strand-swap dimerization of E-cadherin in solution visualized by high-speed atomic force microscopy
Shigetaka Nishiguchi, T. Furuta, T. Uchihashi
2022Proceedings of the National Academy of Sciences of the United States of America12 citations Open access
Semantic Scholar
Kirkwood-Buff Integrals for Aqueous Urea Solutions Based upon the Quantum Chemical Electrostatic Potential and Interaction Energies.
S. Chiba, T. Furuta, S. Shimizu
2016Journal of Physical Chemistry B12 citations Open access
Semantic Scholar
Molecular mechanism of protein aggregation inhibition with sulfobetaine polymers and their hydrophobic derivatives
Robin Rajan, T. Furuta, Dandan Zhao, Kazuaki Matsumura
2024Cell Reports Physical Science11 citations Open access
Semantic Scholar
C-Series Coelenterazine-Driven Bioluminescence Signature Imaging
Genta Kamiya, Nobuo Kitada, T. Furuta, T. Hirano +2 more
2022International Journal of Molecular Sciences10 citations Open access
Semantic Scholar
Molecular mechanism underlying the selective attack of trehalose lipids on cancer cells as revealed by coarse-grained molecular dynamics simulations
Ryosuke Hirano, Takashi Kagamiya, Y. Matsumoto, T. Furuta +1 more
2021Biochemistry and Biophysics Reports10 citations Open access
Semantic Scholar
Structural Dynamics of the Heterodimeric ABC Transporter TM287/288 Induced by ATP and Substrate Binding.
T. Furuta, Yukiko Sato, M. Sakurai
2016Biochemistry10 citations
Semantic Scholar
The Dry Preservation of Giant Vesicles Using a Group 3 LEA Protein Model Peptide and Its Molecular Mechanism
T. Furuki, Takahiro Watanabe, T. Furuta, K. Takano +2 more
201610 citations
Semantic Scholar
A Fluorescent Protein Scaffold for Presenting Structurally Constrained Peptides Provides an Effective Screening System to Identify High Affinity Target-Binding Peptides
T. Kadonosono, Etsuri Yabe, T. Furuta, Akihiro Yamano +5 more
2014PLoS ONE10 citations Open access
Semantic Scholar
Coelenterazine Indicators for the Specific Imaging of Human and Bovine Serum Albumins
Sung-Bae Kim, Genta Kamiya, T. Furuta, Nobuo Kitada +1 more
2023Italian National Conference on Sensors9 citations Open access
Semantic Scholar
Protein Needles Designed to Self-Assemble through Needle Tip Engineering.
Kosuke Kikuchi, T. Fukuyama, T. Uchihashi, T. Furuta +2 more
2022Small9 citations
Semantic Scholar
The mechanosensitive channel YbdG from Escherichia coli has a role in adaptation to osmotic up-shock
Shun Amemiya, H. Toyoda, Mami Kimura, H. Saito +9 more
2019Journal of Biological Chemistry9 citations Open access
Semantic Scholar
Bioluminescent imaging systems boosting near-infrared signals in mammalian cells
Sung-Bae Kim, T. Furuta, Y. Ohmuro-Matsuyama, Nobuo Kitada +2 more
2023Photochemical and Photobiological Sciences7 citations Open access
Semantic Scholar
Replica exchange molecular dynamics simulation study on the mechanism of desiccation-induced structuralization of an intrinsically disordered peptide as a model of LEA proteins
Tatsushi Nishimoto, Yuta Takahashi, Shohei Miyama, T. Furuta +1 more
2019Biophysics and Physicobiology7 citations Open access
Semantic Scholar
Water-mediated forces between the nucleotide binding domains generate the power stroke in an ABC transporter
Tomoka Furukawa-Hagiya, N. Yoshida, S. Chiba, Tomohiko Hayashi +3 more
20147 citations
Semantic Scholar
Two cyanobacterial response regulators with diguanylate cyclase activity, Rre2 and Rre8, participate in biofilm formation
Ayumu Kobayashi, Masamune Nakamura, Masaru Tsujii, K. Makino +12 more
2023Molecular Microbiology6 citations Open access
Semantic Scholar
Crystalline chitin hydrolase is a burnt-bridge Brownian motor
A. Nakamura, K. Okazaki, T. Furuta, M. Sakurai +2 more
2020Biophysics and Physicobiology6 citations Open access
Semantic Scholar
Functional characterization of multiple PAS domain-containing diguanylate cyclases in Synechocystis sp. PCC 6803.
K. Ishikawa, Chihiro Chubachi, S. Tochigi, Naomi Hoshi +6 more
2020Microbiology6 citations Open access
Semantic Scholar
Development of an ATP force field for coarse‐grained simulation of ATPases and its application to the maltose transporter
Ryosuke Hirano, T. Yabuchi, M. Sakurai, T. Furuta
2019Journal of Computational Chemistry6 citations
Semantic Scholar
The mechanism of nucleotide‐binding domain dimerization in the intact maltose transporter as studied by all‐atom molecular dynamics simulations
W. Hsu, T. Furuta, M. Sakurai
2018Proteins: Structure, Function, and Bioinformatics6 citations
Semantic Scholar
Alanine substitution in cellobiohydrolase provides new insights into substrate threading
Shigenobu Mitsuzawa, Maiko Fukuura, Satoru Shinkawa, K. Kimura +1 more
2017Scientific Reports6 citations Open access
Semantic Scholar
Glow‐type conversion and characterization of a minimal luciferase via mutational analyses
Y. Ohmuro-Matsuyama, Hayato Matsui, Masaki Kanai, T. Furuta
2023The FEBS Journal5 citations
Semantic Scholar
Creation of Artificial Luciferase 60s from Sequential Insights and Their Applications to Bioassays
Sung-Bae Kim, T. Furuta, Nobuo Kitada, S. Maki
2023Italian National Conference on Sensors5 citations Open access
Semantic Scholar
Engineering of an in-cell protein crystal for fastening a metastable conformation of a target miniprotein.
M. Kojima, S. Abe, T. Furuta, Duy Phuoc Tran +5 more
2023Biomaterials Science5 citations
Semantic Scholar
Improving bioluminescence of a minimal luciferase by adding a charged oligopeptide: picALuc2.0
Y. Ohmuro-Matsuyama, Hayato Matsui, Masaki Kanai, T. Furuta
2023Biotechnology Journal5 citations Open access
Semantic Scholar
Analysis of Arabidopsis TPK2 and KCO3 reveals structural properties required for K+ channel function
Chihiro Uehara, Kota Takeda, Tatsuki Ibuki, T. Furuta +3 more
2020Channels5 citations Open access
Semantic Scholar
Binding profile of quinonoid-dihydrobiopterin to quinonoid-dihydropteridine reductase examined by in silico and in vitro analyses.
Haruka Kono, Satoshi Hara, T. Furuta, H. Ichinose
2023Journal of Biochemistry (Tokyo)4 citations
Semantic Scholar
A novel ring-shaped reaction pathway with interconvertible intermediates in chitinase A as revealed by QM/MM simulation combined with a one-dimensional projection technique.
T. Iino, M. Sakurai, T. Furuta
2019Physical Chemistry, Chemical Physics - PCCP4 citations
Semantic Scholar
Probing native metal ion association sites through quenching of fluorophores in the nucleotide-binding domains of the ABC transporter MsbA.
D. Tatsumi, Kei Nanatani, Yuto Koike, K. Kamagata +5 more
2017Biochemical Journal4 citations
Semantic Scholar

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