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Yakir A. Reshef · SciRah

Researcher profile · Semantic Scholar

Yakir A. Reshef

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Yakir A. Reshef — researcher profile on SciRah

h-index: 24
Works: 48
Citations: 12K

Most-cited papers

Detecting Novel Associations in Large Datasets
David N. Reshef, Yakir A. Reshef, H. Finucane, Sharon R. Grossman +5 more
2011Science3,290 citations Open access
Semantic Scholar
Partitioning heritability by functional annotation using genome-wide association summary statistics
H. Finucane, B. Bulik-Sullivan, Alexander Gusev, G. Trynka +19 more
2015Nature Genetics2,533 citations Open access
Semantic Scholar
Reference-based phasing using the Haplotype Reference Consortium panel
Po-ru Loh, P. Danecek, P. Palamara, C. Fuchsberger +8 more
2016Nature Genetics1,674 citations Open access
Semantic Scholar
Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types
H. Finucane, Yakir A. Reshef, V. Anttila, Kamil Slowikowski +17 more
2017Nature Genetics1,030 citations Open access
Semantic Scholar
Sequential regulatory activity prediction across chromosomes with convolutional neural networks
David R. Kelley, Yakir A. Reshef, Maxwell L. Bileschi, David Belanger +2 more
2017bioRxiv544 citations Open access
Semantic Scholar
Transcriptome-wide association study of schizophrenia and chromatin activity yields mechanistic disease insights
Alexander Gusev, N. Mancuso, H. Won, M. Kousi +14 more
2016Nature Genetics462 citations Open access
Semantic Scholar
Deconstruction of rheumatoid arthritis synovium defines inflammatory subtypes
Fan Zhang, A. Jonsson, A. Nathan, N. Millard +85 more
2023Nature396 citations Open access
Semantic Scholar
Functionally-informed fine-mapping and polygenic localization of complex trait heritability
Omer Weissbrod, Farhad Hormozdiari, C. Benner, Ran Cui +10 more
2019Nature Genetics366 citations Open access
Semantic Scholar
Insights about clonal hematopoiesis from 8,342 mosaic chromosomal alterations
Po-ru Loh, G. Genovese, R. Handsaker, H. Finucane +7 more
2018Nature362 citations Open access
Semantic Scholar
Leveraging molecular quantitative trait loci to understand the genetic architecture of diseases and complex traits
Farhad Hormozdiari, S. Gazal, Bryce van de Geijn, H. Finucane +9 more
2018Nature Genetics179 citations Open access
Semantic Scholar
Granzyme K activates the entire complement cascade
Carlos A Donado, Erin Theisen, Fan Zhang, A. Nathan +89 more
2025Nature115 citations Open access
Semantic Scholar
Measuring Dependence Powerfully and Equitably
Yakir A. Reshef, David N. Reshef, H. Finucane, Pardis C Sabeti +1 more
2015Journal of machine learning research90 citations
Semantic Scholar
Equitability Analysis of the Maximal Information Coefficient, with Comparisons
David N. Reshef, Yakir A. Reshef, M. Mitzenmacher, Pardis C Sabeti
2013arXiv.org89 citations
Semantic Scholar
Partitioning heritability by functional category using GWAS summary statistics
H. Finucane, B. Bulik-Sullivan, Alexander Gusev, G. Trynka +19 more
2015bioRxiv76 citations Open access
Semantic Scholar
Clonal associations between lymphocyte subsets and functional states in rheumatoid arthritis synovium
G. Dunlap, Aaron Wagner, N. Meednu, Ruo-Qiao H. Wang +84 more
2024Nature Communications73 citations Open access
Semantic Scholar
Estimating cross-population genetic correlations of causal effect sizes
K. Galinsky, Yakir A. Reshef, H. Finucane, Po-ru Loh +4 more
2018Genetic Epidemiology70 citations Open access
Semantic Scholar
Detecting genome-wide directional effects of transcription factor binding on polygenic disease risk
Yakir A. Reshef, H. Finucane, David R. Kelley, Alexander Gusev +15 more
2017Nature Genetics68 citations Open access
Semantic Scholar
Tissue-specific enhancer–gene maps from multimodal single-cell data identify causal disease alleles
S. Sakaue, Kathryn Weinand, Shakson Isaac, K. Dey +86 more
2022Nature Genetics52 citations Open access
Semantic Scholar
An empirical study of the maximal and total information coefficients and leading measures of dependence
David N. Reshef, Yakir A. Reshef, P. Sabeti, M. Mitzenmacher
201851 citations Open access
Semantic Scholar
Covarying neighborhood analysis identifies cell populations associated with phenotypes of interest from single-cell transcriptomics
Yakir A. Reshef, Laurie Rumker, Joyce B. Kang, A. Nathan +5 more
2021Nature Biotechnology46 citations Open access
Semantic Scholar
Mapping the dynamic genetic regulatory architecture of HLA genes at single-cell resolution
Joyce B. Kang, Amber Z. Shen, Saisriram Gurajala, A. Nathan +101 more
2023Nature Genetics43 citations Open access
Semantic Scholar
Cellular deconstruction of inflamed synovium defines diverse inflammatory phenotypes in rheumatoid arthritis
Fan Zhang, A. Jonsson, A. Nathan, Kevin Wei +80 more
2022bioRxiv34 citations Open access
Semantic Scholar
Cleaning up the record on the maximal information coefficient and equitability
David N. Reshef, Yakir A. Reshef, M. Mitzenmacher, Pardis C Sabeti
2014Proceedings of the National Academy of Sciences of the United States of America33 citations Open access
Semantic Scholar
The chromatin landscape of pathogenic transcriptional cell states in rheumatoid arthritis
Kathryn Weinand, S. Sakaue, A. Nathan, A. Jonsson +82 more
2024Nature Communications24 citations Open access
Semantic Scholar
Adipocyte associated glucocorticoid signaling regulates normal fibroblast function which is lost in inflammatory arthritis
Heather J Faust, T. Cheng, I. Korsunsky, Gerald F. M. Watts +94 more
2024Nature Communications24 citations Open access
Semantic Scholar
Annotations capturing cell-type-specific TF binding explain a large fraction of disease heritability
Bryce van de Geijn, H. Finucane, S. Gazal, Farhad Hormozdiari +8 more
2018bioRxiv20 citations Open access
Semantic Scholar
An Empirical Study of Leading Measures of Dependence
David N. Reshef, Yakir A. Reshef, Pardis C Sabeti, M. Mitzenmacher
2015arXiv.org19 citations
Semantic Scholar
Comparing Pedigree Graphs
Bonnie Kirkpatrick, Yakir A. Reshef, H. Finucane, Hai-Tao Jiang +2 more
2010J. Comput. Biol.15 citations Open access
Semantic Scholar
Equitability, interval estimation, and statistical power
Yakir A. Reshef, David N. Reshef, Pardis C Sabeti, M. Mitzenmacher
2015Statistical Science13 citations Open access
Semantic Scholar
Motif-Raptor: a cell type-specific and transcription factor centric approach for post-GWAS prioritization of causal regulators
Qiuming Yao, P. Ferragina, Yakir A. Reshef, G. Lettre +2 more
2021Bioinform.11 citations Open access
Semantic Scholar
Theoretical Foundations of Equitability and the Maximal Information Coefficient
Yakir A. Reshef, David N. Reshef, Pardis C Sabeti, M. Mitzenmacher
2014arXiv.org11 citations
Semantic Scholar
Interaction Patterns of Men Who Have Sex With Men on a Geosocial Networking Mobile App in Seven United States Metropolitan Areas: Observational Study
Nadia N. Abuelezam, Yakir A. Reshef, D. Novak, Y. Grad +3 more
2019Journal of Medical Internet Research9 citations Open access
Semantic Scholar
Identifying genetic variants that influence the abundance of cell states in single-cell data
Laurie Rumker, S. Sakaue, Yakir A. Reshef, Joyce B. Kang +9 more
2024Nature Genetics8 citations Open access
Semantic Scholar
Negative short-range genomic autocorrelation of causal effects on human complex traits
A. Schoech, Omer Weissbrod, L. O'Connor, N. Patterson +3 more
2020bioRxiv8 citations Open access
Semantic Scholar
Leveraging molecular QTL to understand the genetic architecture of diseases and complex traits
Farhad Hormozdiari, S. Gazal, Bryce van de Geijn, H. Finucane +9 more
2017bioRxiv7 citations Open access
Semantic Scholar
Axes of inter-sample variability among transcriptional neighborhoods reveal disease-associated cell states in single-cell data
Yakir A. Reshef, Laurie Rumker, Joyce B. Kang, A. Nathan +5 more
2021bioRxiv3 citations Open access
Semantic Scholar
On Resilient and Exposure-Resilient Functions
Yakir A. Reshef
20113 citations
Semantic Scholar
Algorithms for Big Data: CS498 2022
Nelson Jelani, Scribe, Yakir A. Reshef
3 citations
Semantic Scholar
Identifying genetic variants that influence the abundance of cell states in single-cell data
Laurie Rumker, Saori Sakaue, Yakir A. Reshef, Joyce B. Kang +9 more
2023bioRxiv2 citations Open access
Semantic Scholar
Algorithms for Comparing Pedigree Graphs
Bonnie Kirkpatrick, Yakir A. Reshef, H. Finucane, Hai-Tao Jiang +2 more
2010arXiv.org2 citations
Semantic Scholar
On extractors and exposure-resilient functions for sublogarithmic entropy
Yakir A. Reshef, Salil P. Vadhan
2010Random Struct. Algorithms2 citations Open access
Semantic Scholar
Powerful and accurate case-control analysis of spatial molecular data
Yakir A. Reshef, Lakshay Sood, Michelle Curtis, Laurie Rumker +7 more
2025bioRxiv1 citations
Semantic Scholar
Reshef Detecting Novel Associations in Large Data Sets
David N. Reshef, Yakir A. Reshef, Hilary Finucane, Sharon R. Grossman +5 more
20111 citations
Semantic Scholar
Accurate and well-powered case-control analysis of spatial molecular data.
Yakir A. Reshef, Lakshay Sood, Michelle Curtis, Laurie Rumker +7 more
2026Nature Methods0 citations Open access
Semantic Scholar
Learning Representations of Multi-Condition Single-Cell Data
Yakir A. Reshef, S. Raychaudhuri
20200 citations
Semantic Scholar
Interaction Patterns of Men Who Have Sex With Men on a Geosocial Networking Mobile App in Seven United States Metropolitan Areas: Observational Study (Preprint)
Nadia N. Abuelezam, Yakir A. Reshef, D. Novak, Y. Grad +3 more
20190 citations Open access
Semantic Scholar
Detecting Meaningful Relationships in Large Data Sets
Yakir A. Reshef
20180 citations
Semantic Scholar
Reshef Detecting Novel Associations in Large Data Sets
David N. Reshef, Yakir A. Reshef, Hilary Finucane, Sharon R. Grossman +5 more
20110 citations
Semantic Scholar

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