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K. Dey · SciRah

Researcher profile · Semantic Scholar

K. Dey

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K. Dey — researcher profile on SciRah

h-index: 22
Works: 47
Citations: 3,636

Most-cited papers

COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets
T. Delorey, Carly G. K. Ziegler, Graham Heimberg, R. Normand +105 more
2021Nature719 citations Open access
Semantic Scholar
Genome-wide enhancer maps link risk variants to disease genes
Joseph Nasser, Drew T. Bergman, Charles P. Fulco, Philine Guckelberger +28 more
2021Nature569 citations Open access
Semantic Scholar
Photochemical modulation of biosafe manganese nanoparticles on Vigna radiata: a detailed molecular, biochemical, and biophysical study.
Saheli Pradhan, Prasun Patra, Sumistha Das, S. Chandra +5 more
2013Environmental Science and Technology293 citations
Semantic Scholar
Polygenic enrichment distinguishes disease associations of individual cells in single-cell RNA-seq data
Martin Jinye Zhang, Kangcheng Hou, K. Dey, S. Sakaue +11 more
2021bioRxiv261 citations Open access
Semantic Scholar
Identifying disease-critical cell types and cellular processes by integrating single-cell RNA sequencing and human genetics
K. Jagadeesh, K. Dey, Daniel T. Montoro, Ramkumar Veppathur Mohan +5 more
2022Nature Genetics193 citations Open access
Semantic Scholar
Improving the trans-ancestry portability of polygenic risk scores by prioritizing variants in predicted cell-type-specific regulatory elements
T. Amariuta, K. Ishigaki, Hiroki Sugishita, T. Ohta +8 more
2020Nature Genetics162 citations Open access
Semantic Scholar
Polygenic architecture of rare coding variation across 394,783 exomes
D. Weiner, Ajay Nadig, K. A. Jagadeesh, K. Dey +4 more
2023Nature152 citations Open access
Semantic Scholar
Combining SNP-to-gene linking strategies to identify disease genes and assess disease omnigenicity
S. Gazal, Omer Weissbrod, Farhad Hormozdiari, K. Dey +9 more
2022Nature Genetics151 citations Open access
Semantic Scholar
Genetic history from the Middle Neolithic to present on the Mediterranean island of Sardinia
J. Marcus, C. Posth, Harald Ringbauer, L. Lai +34 more
2020Nature Communications148 citations Open access
Semantic Scholar
SAIGE-GENE+ improves the efficiency and accuracy of set-based rare variant association tests
Wei Zhou, Wenjian Bi, Zhangchen Zhao, K. Dey +5 more
2022Nature Genetics129 citations Open access
Semantic Scholar
Strengths and limitations of microarray-based phenotype prediction: lessons learned from the IMPROVER Diagnostic Signature Challenge
A. Tarca, M. Lauria, Michael Unger, Erhan Bilal +16 more
2013Bioinform.115 citations Open access
Semantic Scholar
Scalable genetic screening for regulatory circuits using Compressed Perturb-seq
Douglas Yao, Loic Binan, Jon Bezney, Brooke Simonton +8 more
2023Nature Biotechnology104 citations Open access
Semantic Scholar
Manganese nanoparticles: impact on non-nodulated plant as a potent enhancer in nitrogen metabolism and toxicity study both in vivo and in vitro.
Saheli Pradhan, Prasun Patra, Shouvik Mitra, K. Dey +5 more
2014Journal of Agricultural and Food Chemistry104 citations
Semantic Scholar
Copper nanoparticle (CuNP) nanochain arrays with a reduced toxicity response: a biophysical and biochemical outlook on Vigna radiata.
Saheli Pradhan, Prasun Patra, Shouvik Mitra, K. Dey +4 more
2015Journal of Agricultural and Food Chemistry62 citations
Semantic Scholar
Tissue-specific enhancer–gene maps from multimodal single-cell data identify causal disease alleles
S. Sakaue, Kathryn Weinand, Shakson Isaac, K. Dey +86 more
2022Nature Genetics52 citations Open access
Semantic Scholar
A single-cell and spatial atlas of autopsy tissues reveals pathology and cellular targets of SARS-CoV-2
T. Delorey, Carly G. K. Ziegler, Graham Heimberg, R. Normand +98 more
2021bioRxiv44 citations Open access
Semantic Scholar
Mapping the dynamic genetic regulatory architecture of HLA genes at single-cell resolution
Joyce B. Kang, Amber Z. Shen, Saisriram Gurajala, A. Nathan +101 more
2023Nature Genetics43 citations Open access
Semantic Scholar
Evaluating the informativeness of deep learning annotations for human complex diseases
K. Dey, Bryce van de Geijn, Samuel S. Kim, Farhad Hormozdiari +2 more
2019Nature Communications43 citations Open access
Semantic Scholar
Leveraging single-cell ATAC-seq and RNA-seq to identify disease-critical fetal and adult brain cell types
Samuel S. Kim, B. Truong, Karthik Jagadeesh, K. Dey +4 more
2024Nature Communications41 citations Open access
Semantic Scholar
Microwave synthesis of ZnO@mSiO₂ for detailed antifungal mode of action study: understanding the insights into oxidative stress.
Shouvik Mitra, Prasun Patra, Saheli Pradhan, Nitai Debnath +4 more
2015Journal of Colloid and Interface Science35 citations
Semantic Scholar
Identifying disease-critical cell types and cellular processes across the human body by integration of single-cell profiles and human genetics
K. Jagadeesh, K. Dey, Daniel T. Montoro, Ramkumar Veppathur Mohan +5 more
2021bioRxiv29 citations Open access
Semantic Scholar
SNP-to-gene linking strategies reveal contributions of enhancer-related and candidate master-regulator genes to autoimmune disease
K. Dey, S. Gazal, Bryce van de Geijn, Samuel S. Kim +3 more
2022Cell Genomics27 citations Open access
Semantic Scholar
On Geometric Ergodicity of Additive and Multiplicative Transformation Based Markov Chain Monte Carlo in High Dimensions
K. Dey, S. Bhattacharya
201321 citations Open access
Semantic Scholar
Systematically characterizing the roles of E3-ligase family members in inflammatory responses with massively parallel Perturb-seq
Kathryn Geiger-Schuller, B. Eraslan, O. Kuksenko, K. Dey +18 more
2023bioRxiv17 citations Open access
Semantic Scholar
Improving the informativeness of Mendelian disease-derived pathogenicity scores for common disease
Samuel S. Kim, K. Dey, Omer Weissbrod, Carla Márquez-Luna +2 more
2020Nature Communications17 citations Open access
Semantic Scholar
Colloidal stability and coagulation kinetics study of different sized sulphur nanoparticles
Samrat Roy Choudhury, K. Dey, S. Bera, A. Goswami
201315 citations Open access
Semantic Scholar
Genome-wide maps of enhancer regulation connect risk variants to disease genes
Joseph Nasser, Drew T. Bergman, Charles P. Fulco, Philine Guckelberger +26 more
2020bioRxiv14 citations Open access
Semantic Scholar
SNP-to-gene linking strategies reveal contributions of enhancer-related and candidate master-regulator genes to autoimmune disease
K. Dey, S. Gazal, Bryce van de Geijn, Samuel S. Kim +3 more
2020bioRxiv11 citations Open access
Semantic Scholar
A Brief Tutorial on Transformation Based Markov Chain Monte Carlo and Optimal Scaling of the Additive Transformation
K. Dey, S. Bhattacharya
201311 citations Open access
Semantic Scholar
Population history from the Neolithic to present on the Mediterranean island of Sardinia: An ancient DNA perspective
J. Marcus, C. Posth, Harald Ringbauer, L. Lai +18 more
2019bioRxiv10 citations Open access
Semantic Scholar
Compressed Perturb-seq: highly efficient screens for regulatory circuits using random composite perturbations
Douglas Yao, Loïc Binan, Jon Bezney, Brooke Simonton +8 more
2023bioRxiv9 citations Open access
Semantic Scholar
Polygenic architecture of rare coding variation across 400,000 exomes
D. Weiner, A. Nadig, K. A. Jagadeesh, K. Dey +4 more
2022medRxiv8 citations Open access
Semantic Scholar
Set-based rare variant association tests for biobank scale sequencing data sets
Wei Zhou, Wenjian Bi, Zhangchen Zhao, K. Dey +5 more
2021medRxiv7 citations Open access
Semantic Scholar
Combining SNP-to-gene linking strategies to pinpoint disease genes and assess disease omnigenicity
S. Gazal, Omer Weissbrod, Farhad Hormozdiari, K. Dey +9 more
2021medRxiv6 citations Open access
Semantic Scholar
Leveraging single-cell ATAC-seq to identify disease-critical fetal and adult brain cell types
Samuel S. Kim, K. Jagadeesh, K. Dey, Amber Z. Shen +3 more
2021bioRxiv6 citations Open access
Semantic Scholar
On Optimal Scaling of Additive Transformation Based Markov Chain Monte Carlo Under Non-Regular Cases
K. Dey, S. Bhattacharya
20146 citations
Semantic Scholar
Learning diagnostic signatures from microarray data using L1-regularized logistic regression
Preetam Nandy, Michael Unger, C. Zechner, K. Dey +1 more
20136 citations Open access
Semantic Scholar
Integrative approaches to improve the informativeness of deep learning models for human complex diseases
K. Dey, Samuel S. Kim, S. Gazal, Joseph Nasser +2 more
2020bioRxiv4 citations Open access
Semantic Scholar
Dividend Policy And An Empirical Analysis On Its Determinants: A Study On Selected FMCG Firms In India
K. Dey
20211 citations
Semantic Scholar
A rainfall-runoff model using artificial neural networks for the district of Bankura in a time of climate change
K. Dey, V. K. Dwivedi, Satanand Mishra
20201 citations Open access
Semantic Scholar
Tests for statistical significance of a treatment effect in the presence of hidden sub-populations
B. Karmakar, K. Dhara, K. Dey, A. Basu +1 more
2012Stat. Methods Appl.1 citations
Semantic Scholar
Publisher Correction: SAIGE-GENE+ improves the efficiency and accuracy of set-based rare variant association tests
Wei Zhou, Wenjian Bi, Zhangchen Zhao, K. Dey +5 more
2022Nature Genetics0 citations Open access
Semantic Scholar
A convex optimization framework for gene-level tissue network estimation with missing data and its application in understanding disease architecture
K. Dey, R. Mazumder
2020bioRxiv0 citations Open access
Semantic Scholar
On Additive Transformation based Markov Chain Monte Carlo
K. Dey
20160 citations
Semantic Scholar
Toxicological Evaluation of Antimicrobially Potent Sulfur Nanoparticles Against Biochemical, Histopathological, and Behavioral Properties in Mice
S. Roy Choudhury, A. Basu, K. Dey, T. Nag +1 more
2015Proceedings of the Zoological Society0 citations
Semantic Scholar
Toxicological Evaluation of Antimicrobially Potent Sulfur Nanoparticles Against Biochemical, Histopathological, and Behavioral Properties in Mice
S. Roy Choudhury, A. Basu, K. Dey, T. Nag +1 more
2014Proceedings of the Zoological Society0 citations
Semantic Scholar
Simulation Based Model Checking for HierarchicalModelsDipak
K. Dey, A. Gelfand, B. Tim, Swartzand +1 more
19940 citations
Semantic Scholar

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