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B. Lin · SciRah

Researcher profile · Semantic Scholar

B. Lin

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B. Lin — researcher profile on SciRah

h-index: 49
Works: 133
Citations: 8,373

Most-cited papers

A High-Confidence Human Plasma Proteome Reference Set with Estimated Concentrations in PeptideAtlas*
T. Farrah, E. Deutsch, G. Omenn, D. Campbell +11 more
2011Molecular & Cellular Proteomics450 citations Open access
Semantic Scholar
Identification of cavities on protein surface using multiple computational approaches for drug binding site prediction
Zeng-Ming Zhang, Yu Li, B. Lin, Michael Schroeder +1 more
2011Bioinform.325 citations Open access
Semantic Scholar
The SOX2 response program in glioblastoma multiforme: an integrated ChIP-seq, expression microarray, and microRNA analysis
Xuefeng Fang, Jae-Geun Yoon, Lisha Li, Wei Yu +7 more
2011BMC Genomics174 citations Open access
Semantic Scholar
Genome-Wide Profiling of Histone H3 Lysine 4 and Lysine 27 Trimethylation Reveals an Epigenetic Signature in Prostate Carcinogenesis
X. Ke, Y. Qu, Kari Rostad, Wen-cheng Li +10 more
2009PLoS ONE162 citations Open access
Semantic Scholar
Silencing SOX2 Induced Mesenchymal-Epithelial Transition and Its Expression Predicts Liver and Lymph Node Metastasis of CRC Patients
Xu Han, Xuefeng Fang, Xiaoyan Lou, Dasong Hua +5 more
2012PLoS ONE156 citations Open access
Semantic Scholar
Elevated expression of DKK1 is associated with cytoplasmic/nuclear beta-catenin accumulation and poor prognosis in hepatocellular carcinomas.
Bin Yu, Xin-Rong Yang, Yang Xu, Gen-Fu Yao +8 more
2009Journal of Hepatology151 citations
Semantic Scholar
Proteomic analysis of seminal plasma from asthenozoospermia patients reveals proteins that affect oxidative stress responses and semen quality.
Jun Wang, Jian Wang, Hua-Rong Zhang, Huiling Shi +4 more
2009Asian Journal of Andrology119 citations Open access
Semantic Scholar
SOX2 Targets Fibronectin 1 to Promote Cell Migration and Invasion in Ovarian Cancer: New Molecular Leads for Therapeutic Intervention
Xiaoyan Lou, Xu Han, Chengmeng Jin, W. Tian +6 more
2013Omics102 citations Open access
Semantic Scholar
RNA-Seq Analyses Generate Comprehensive Transcriptomic Landscape and Reveal Complex Transcript Patterns in Hepatocellular Carcinoma
Qichao Huang, B. Lin, Han-Qiang Liu, Xi Ma +9 more
2011PLoS ONE102 citations Open access
Semantic Scholar
Comprehensive Analysis of MGMT Promoter Methylation: Correlation with MGMT Expression and Clinical Response in GBM
N. Shah, B. Lin, Zita A. Sibenaller, T. Ryken +4 more
2011PLoS ONE99 citations Open access
Semantic Scholar
Axitinib blocks Wnt/β-catenin signaling and directs asymmetric cell division in cancer
Y. Qu, Naouel Gharbi, Xing Yuan, J. R. Olsen +8 more
2016Proceedings of the National Academy of Sciences of the United States of America96 citations Open access
Semantic Scholar
Massively Parallel Signature Sequencing and Bioinformatics Analysis Identifies Up-Regulation of TGFBI and SOX4 in Human Glioblastoma
B. Lin, A. Madan, Jae-Geun Yoon, Xuefeng Fang +5 more
2010PLoS ONE92 citations Open access
Semantic Scholar
Towards personalized medicine with a three-dimensional micro-scale perfusion-based two-chamber tissue model system
Liang Ma, J. Barker, Changchun Zhou, Wei Li +5 more
2012Biomaterials89 citations Open access
Semantic Scholar
MetaDBSite: a meta approach to improve protein DNA-binding sites prediction
Jing-Na Si, Zeng-Ming Zhang, B. Lin, Michael Schroeder +1 more
2011BMC Systems Biology87 citations Open access
Semantic Scholar
Integrated Expression Profiling and ChIP-seq Analyses of the Growth Inhibition Response Program of the Androgen Receptor
B. Lin, Jun Wang, X. Hong, Xiaowei Yan +9 more
2009PLoS ONE86 citations Open access
Semantic Scholar
Quantitative Proteomics Analysis Integrated with Microarray Data Reveals That Extracellular Matrix Proteins, Catenins, and P53 Binding Protein 1 Are Important for Chemotherapy Response in Ovarian Cancers
Sheng Pan, Li-Hua Cheng, James T. White, Wei Lu +6 more
2009Omics82 citations Open access
Semantic Scholar
Global analysis of H3K4me3 and H3K27me3 profiles in glioblastoma stem cells and identification of SLC17A7 as a bivalent tumor suppressor gene
B. Lin, Hwahyung Lee, Jae-Geun Yoon, A. Madan +8 more
2015OncoTarget77 citations Open access
Semantic Scholar
Analysis of chemotherapy response programs in ovarian cancers by the next generation sequencing technologies
Li-Hua Cheng, Wei Lu, Bhushan Kulkarni, T. Pejovic +5 more
2010Gynecologic Oncology77 citations Open access
Semantic Scholar
ChIP-seq and Functional Analysis of the SOX2 Gene in Colorectal Cancers
Xuefeng Fang, Wei Yu, Lisha Li, Jiaofang Shao +6 more
2010Omics74 citations
Semantic Scholar
UCHL1 Is a Putative Tumor Suppressor in Ovarian Cancer Cells and Contributes to Cisplatin Resistance
Chengmeng Jin, Wei Yu, Xiaoyan Lou, Fan Zhou +3 more
2013Journal of Cancer72 citations Open access
Semantic Scholar
Landscape of the SOX2 protein–protein interactome
Xuefeng Fang, Jae-Geun Yoon, Lisha Li, Yi-Hsuan S. Tsai +5 more
2011Proteomics72 citations
Semantic Scholar
Developing Urinary Metabolomic Signatures as Early Bladder Cancer Diagnostic Markers
Chong Shen, Zeyu Sun, Deying Chen, Xiaoling Su +4 more
2015Omics68 citations Open access
Semantic Scholar
NDRG3 is an androgen regulated and prostate enriched gene that promotes in vitro and in vivo prostate cancer cell growth
Wei-Qun Wang, Yu-Hua Li, Yang Li, Aizhen Hong +3 more
2009International Journal of Cancer67 citations
Semantic Scholar
CHI3L1 Is a Liver-Enriched, Noninvasive Biomarker That Can Be Used to Stage and Diagnose Substantial Hepatic Fibrosis
Hai-Jun Huang, Tiangang Wu, Jian-Qun Mao, Yongxin Fang +5 more
2015Omics64 citations Open access
Semantic Scholar
Generation of prostate tumor-initiating cells is associated with elevation of reactive oxygen species and IL-6/STAT3 signaling.
Y. Qu, A. Oyan, Run-Hui Liu, Y. Hua +12 more
2013Cancer Research64 citations Open access
Semantic Scholar
Global Analysis of DNA Methylation by Methyl-Capture Sequencing Reveals Epigenetic Control of Cisplatin Resistance in Ovarian Cancer Cell
Wei Yu, Chengmeng Jin, Xiaoyan Lou, Xu Han +7 more
2011PLoS ONE64 citations Open access
Semantic Scholar
A Catalogue of Glioblastoma and Brain MicroRNAs Identified by Deep Sequencing
Dasong Hua, F. Mo, D. Ding, Lisha Li +6 more
2012Omics62 citations Open access
Semantic Scholar
Deep depletion of abundant serum proteins reveals low-abundant proteins as potential biomarkers for human ovarian cancer
B. Lin, James T. White, Jian Wu, S. Lele +3 more
2009PROTEOMICS - Clinical Applications61 citations Open access
Semantic Scholar
Digital Transformation in Personalized Medicine with Artificial Intelligence and the Internet of Medical Things
B. Lin, Sheng-Jun Wu
2021Omics59 citations
Semantic Scholar
Human miR-31 targets radixin and inhibits migration and invasion of glioma cells.
Dasong Hua, D. Ding, Xu Han, Weiyi Zhang +5 more
2011Oncology Report55 citations Open access
Semantic Scholar
The United States of America and Scientific Research
G. Hather, Winston A. Haynes, R. Higdon, Natali Kolker +12 more
2010PLoS ONE50 citations Open access
Semantic Scholar
Next Generation Sequencing Analysis of miRNAs: MiR-127-3p Inhibits Glioblastoma Proliferation and Activates TGF-β Signaling by Targeting SKI
Huawei Jiang, Chengmeng Jin, Jie Liu, Dasong Hua +8 more
2014Omics49 citations Open access
Semantic Scholar
A dual yet opposite growth-regulating function of miR-204 and its target XRN1 in prostate adenocarcinoma cells and neuroendocrine-like prostate cancer cells
M. Ding, B. Lin, Tao Li, Yuan-Yuan Liu +9 more
2015OncoTarget48 citations Open access
Semantic Scholar
Identifying driver mutations from sequencing data of heterogeneous tumors in the era of personalized genome sequencing
Jing Zhang, Jie Liu, Jianbo Sun, Cheng Chen +2 more
2014Briefings Bioinform.45 citations Open access
Semantic Scholar
MicroRNA-127-3p promotes glioblastoma cell migration and invasion by targeting the tumor-suppressor gene SEPT7.
Huawei Jiang, Dasong Hua, Jing Zhang, Q. Lan +7 more
2014Oncology Report42 citations Open access
Semantic Scholar
SOX4 inhibits GBM cell growth and induces G0/G1 cell cycle arrest through Akt-p53 axis
Jing Zhang, Huawei Jiang, Jiaofang Shao, R. Mao +6 more
2014BMC Neurology39 citations Open access
Semantic Scholar
p63 Attenuates Epithelial to Mesenchymal Potential in an Experimental Prostate Cell Model
J. R. Olsen, A. Oyan, Kari Rostad, M. R. Hellem +9 more
2013PLoS ONE38 citations Open access
Semantic Scholar
COVID-19 (Coronavirus Disease 2019): Opportunities and Challenges for Digital Health and the Internet of Medical Things in China
B. Lin, Sheng-Jun Wu
2020Omics37 citations
Semantic Scholar
The comparison genomics analysis with glioblastoma multiforme (GBM) cells under 3D and 2D cell culture conditions.
Liang Ma, Bin Zhang, Changchun Zhou, Yuting Li +10 more
2018Colloids and Surfaces B: Biointerfaces33 citations
Semantic Scholar
NDRG4 is Downregulated in Glioblastoma and Inhibits Cell Proliferation
Wen-Chao Ding, Jing Zhang, Jae-Geun Yoon, Dong-Yan Shi +2 more
2012Omics32 citations Open access
Semantic Scholar
Multi-Omics and Artificial Intelligence-Guided Data Integration in Chronic Liver Disease: Prospects and Challenges for Precision Medicine
B. Lin, Yingying Ma, Sheng-Jun Wu
2022Omics31 citations
Semantic Scholar
A porous 3D cell culture micro device for cell migration study
Liang Ma, Chang-Chun Zhou, B. Lin, Wei Li
2010Biomedical microdevices31 citations Open access
Semantic Scholar
Context dependent regulatory patterns of the androgen receptor and androgen receptor target genes
J. R. Olsen, W. Azeem, M. R. Hellem, K. Marvyin +7 more
2016BMC Cancer30 citations Open access
Semantic Scholar
A compatible exon-exon junction database for the identification of exon skipping events using tandem mass spectrum data
F. Mo, X. Hong, Feng Gao, L. Du +3 more
2008BMC Bioinformatics29 citations Open access
Semantic Scholar
Recent Patents and Advances in the Next-Generation Sequencing Technologies.
B. Lin, Jun Wang, Yin Cheng
2008Recent Patents on Biomedical Engineering29 citations Open access
Semantic Scholar
Characterisation of peripheral blood mononuclear cell microRNA in hepatitis B-related acute-on-chronic liver failure
Wen-Chao Ding, J. Xin, Longyang Jiang, Qian Zhou +5 more
2015Scientific Reports26 citations Open access
Semantic Scholar
Novel Serum Biomarkers for Noninvasive Diagnosis and Screening of Nonalcoholic Fatty Liver Disease-Related Hepatic Fibrosis
B. Lin, Yingying Ma, Sheng-Jun Wu, Yunhua Liu +2 more
2019Omics25 citations Open access
Semantic Scholar
WaveletQuant, an improved quantification software based on wavelet signal threshold de-noising for labeled quantitative proteomic analysis
F. Mo, Qun Mo, Yuan-Yuan Chen, David R. Goodlett +4 more
2010BMC Bioinformatics21 citations Open access
Semantic Scholar
An Appeal to the Global Health Community for a Tripartite Innovation: An “Essential Diagnostics List,” “Health in All Policies,” and “See-Through 21st Century Science and Ethics”
E. Dove, İ. O. Barlas, K. Birch, C. Boehme +34 more
2015Omics20 citations Open access
Semantic Scholar
Recent patents and advances in genomic biomarker discovery for colorectal cancers.
Qiyun Chen, Zhiyun Ye, Sheng-Cai Lin, B. Lin
2010Recent Patents on DNA & Gene Sequences19 citations
Semantic Scholar

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